Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Picea_20abies_20[ConGenIE_20PRJEB1822-1.0_202015-05-12] 10,253,695 sequences; 12,301,475,675 total letters Query= NC_008035.3 Length=126629 Score E Sequences producing significant alignments: (Bits) Value seq497574 109 4e-19 seq512774 107 1e-18 seq340010 100 2e-16 seq203 98.7 7e-16 seq109075 96.9 2e-15 seq3250489 93.3 3e-14 seq134495 89.7 4e-13 seq59979 87.8 1e-12 seq67916 86.0 4e-12 seq121729 84.2 2e-11 seq62192 82.4 5e-11 seq57571 82.4 5e-11 >seq497574 Length=4355 Score = 109 bits (120), Expect = 4e-19 Identities = 161/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 ||||||| || | |||||| | || || || |||||||| ||||||||||| ||||| Sbjct 2114 CCTCCTCTCAGACGCAGTACAAGGTGAAGAGTTGACTCCTTCTGTATGTTGTAATCGGCA 2055 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | ||| ||||||| | || || || ||| | || | || ||| ||||| || Sbjct 2054 AGAGTTCGCCCGTCCTCAAGCTGCTTTCCAGCAAAGATTAACCTCTGCTGGTCGGGTGGA 1995 Query 16829 ACGCCCTCTTTGTCGGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTT 16888 | ||||| ||||| ||||| |||||| | | | | ||||| | ||| | Sbjct 1994 ATCCCCTCCTTGTCTTGAATTTTGGCCTTCACATTGTCGATCGTGTCAGAGCTCTCAACT 1935 Query 16889 TCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCATT 16936 |||| || ||||| || |||||||| ||||||||||| ||||||||| Sbjct 1934 TCCAGAGTAATGGTCTTGCCGGTCAGGGTTTTGACAAAGATCTGCATT 1887 >seq512774 Length=4225 Score = 107 bits (118), Expect = 1e-18 Identities = 151/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 16724 AGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCC 16783 || |||| |||||| || |||||||| || ||||| || || || | || | || Sbjct 3802 AGCACCAGATGCAGAGTAGACTCCTTCTGAATGTTATAATCAGCAAGAGTACGTCCATCT 3861 Query 16784 TCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCG 16843 ||||| || || || ||| |||| |||| ||| ||||| ||| | |||||| ||||| Sbjct 3862 TCCAACTGCTTACCAGCAAAAATCAGCCTCTGCTGGTCGGGAGGGATGCCCTCCTTGTCC 3921 Query 16844 GCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTT 16903 ||||| |||||| | | | ||||| |||| |||| |||||||||| Sbjct 3922 TGAATTTTAGCCTTCACGTTATCAATGGTGTCCGAACTCTCCACCTCCAAGGTGATGGTT 3981 Query 16904 TTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 || || ||||||||||| ||||| |||||||| Sbjct 3982 TTCCCCGTCAGCGTTTTCACAAAGATCTGCAT 4013 >seq340010 Length=6563 Score = 100 bits (110), Expect = 2e-16 Identities = 154/218 (71%), Gaps = 4/218 (2%) Strand=Plus/Minus Query 16724 AGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCC 16783 ||||| | || || ||||| |||||||| |||||||||||||| | || ||||| Sbjct 597 AGTACGAGGTGGAGAGTGGATTCCTTTTGGATGTTGTAGTCGGCGAGAGTGCGTCCGTCC 538 Query 16784 TCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTC- 16842 ||||| || ||||| || | || || || || ||||| ||| | ||||||||||| Sbjct 537 TCCAACTGCTTGCCAGCGAAGATGAGACGTTGCTGGTCGGGAGGGATACCCTCTTTGTCC 478 Query 16843 -GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGG 16901 || || || |||||| | | | | || || | |||| || | |||||||| Sbjct 477 TGGATCTTGGC--CTTCACATTGTCAATGGTATCAGAGCTCTCCACCTCAAGGGTGATGG 420 Query 16902 TTTTTCCGGTCAGCGTTTTGACAAAAATCTGCATTTTG 16939 | ||||| |||| || || ||||| |||||||| ||| Sbjct 419 TCTTTCCAGTCAATGTCTTCACAAATATCTGCATATTG 382 >seq203 Length=115218 Score = 98.7 bits (108), Expect = 7e-16 Identities = 161/230 (70%), Gaps = 4/230 (2%) Strand=Plus/Minus Query 16708 CCCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGC 16767 ||| || ||||| | || || | || || ||||||||||| || ||||| || ||||| Sbjct 21151 CCCACCGCGTAGACGCAAGACAAGGTGGAGGGTGGACTCCTTCTGAATGTTATAATCGGC 21092 Query 16768 CATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGG 16827 || |||| | ||||||| || ||||| ||| |||| |||| ||| || || ||| Sbjct 21091 CAGGGTTCGCCCATCCTCCAGCTGCTTGCCGGCAAAAATGAGCCTCTGCTGATCAGGAGG 21032 Query 16828 CACGCCCTCTTTGTCGGCAA--TTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCC 16885 | || || ||||| || ||||| |||||| | | | ||| || | ||| Sbjct 21031 AATACCTTCCTTGTCTTGAATCTTTGC--CTTCACGTTATCAATAGTATCAAAGCTCTCA 20974 Query 16886 GTTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 | |||| |||||||| || || |||| ||| || ||||| |||||||| Sbjct 20973 ATCTCCAGTGTGATGGTCTTGCCTGTCAACGTCTTCACAAATATCTGCAT 20924 >seq109075 Length=16623 Score = 96.9 bits (106), Expect = 2e-15 Identities = 160/229 (70%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 || || || || || || |||| ||||| ||||||||||| || ||||| || || ||| Sbjct 11558 CCACCACGAAGTCTGAGCACCAGGTGCAGAGTGGACTCCTTCTGAATGTTATAATCAGCC 11499 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | || | || |||| || || || ||| |||| |||| || ||||| ||| Sbjct 11498 AGCGTACGTCCATCTTCCAGCTGCTTACCAGCAAAAATCAGCCTTTGCTGGTCTGGAGGG 11439 Query 16829 ACGCCCTCTTTGTC--GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCG 16886 | |||||| ||||| || || || |||||| | | | ||||| | |||| Sbjct 11438 ATGCCCTCCTTGTCCTGGATCTTAGC--CTTCACGTTATCAATGGTGTCTGAGCTCTCCA 11381 Query 16887 TTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 |||| ||| ||||||||||| || || ||||| ||||| |||||||| Sbjct 11380 CCTCCAAGGTAATGGTTTTTCCAGTAAGGGTTTTCACAAAGATCTGCAT 11332 >seq3250489 Length=488 Score = 93.3 bits (102), Expect = 3e-14 Identities = 150/214 (70%), Gaps = 4/214 (2%) Strand=Plus/Plus Query 16724 AGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCC 16783 || || | ||| || ||||||||||| || || || ||||| || | ||| | | || Sbjct 109 AGAACGAGATGTAGAGTGGACTCCTTCTGGATATTATAGTCAGCAAGAGTTCGGCCATCT 168 Query 16784 TCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTC- 16842 || | || || || ||| |||| || ||||| ||||| ||| | ||| || ||||| Sbjct 169 TCAAGCTGCTTTCCAGCAAAAATTAGACGCTGCTGGTCAGGAGGAATGCCTTCCTTGTCC 228 Query 16843 -GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGG 16901 || || || |||||| | | | | ||||||| | ||| ||||| || |||| Sbjct 229 TGGATCTTGGC--CTTCACATTGTCGATAGTGTCGGAGCTCTCAACTTCCAAAGTAATGG 286 Query 16902 TTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 | || ||||| || ||||| ||||| |||||||| Sbjct 287 TCTTACCGGTGAGGGTTTTCACAAAGATCTGCAT 320 >seq134495 Length=14222 Score = 89.7 bits (98), Expect = 4e-13 Identities = 144/207 (70%), Gaps = 0/207 (0%) Strand=Plus/Plus Query 16733 TGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCCTCCAATTGT 16792 || || ||||| ||||| || ||||| || || || | |||| | | ||||| | ||| Sbjct 4510 TGAAGAGTGGATTCCTTCTGGATGTTATAATCTGCGAGGGTTCGGCCATCCTCAAGCTGT 4569 Query 16793 TTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCGGCAATTTGC 16852 ||||| ||| |||| |||| ||| || || ||| | ||||| ||||| || | | Sbjct 4570 TTGCCAGCAAAAATGAGCCTCTGCTGATCGGGAGGAATTCCCTCCTTGTCCTGGATCTTC 4629 Query 16853 TGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTTTTTCCGGTC 16912 |||||| | | | | ||| || | ||| || | || ||||| ||||||||| Sbjct 4630 GCCTTCACATTGTCAATAGTATCTGAGCTCTCAACCTCAAGAGTTATGGTCTTTCCGGTC 4689 Query 16913 AGCGTTTTGACAAAAATCTGCATTTTG 16939 | ||| || || || |||||||||||| Sbjct 4690 AACGTCTTCACGAATATCTGCATTTTG 4716 >seq59979 Length=24830 Score = 87.8 bits (96), Expect = 1e-12 Identities = 149/214 (70%), Gaps = 4/214 (2%) Strand=Plus/Plus Query 16724 AGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCC 16783 || || | ||| || ||||||||||| || || || ||||| || | ||| | | || Sbjct 7673 AGAACGAGATGTAGAGTGGACTCCTTCTGGATATTATAGTCAGCAAGAGTTCGGCCATCT 7732 Query 16784 TCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTC- 16842 || | || || || ||| |||| || ||||| ||||| ||| | ||| || ||||| Sbjct 7733 TCAAGCTGCTTTCCAGCAAAAATTAGACGCTGCTGGTCAGGAGGAATGCCTTCCTTGTCC 7792 Query 16843 -GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGG 16901 || || || ||| || | | | | ||||||| | ||| ||||| || || | Sbjct 7793 TGGATCTTGGC--CTTGACATTGTCGATAGTGTCGGAGCTCTCAACTTCCAAAGTAATCG 7850 Query 16902 TTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 | || ||||| || ||||||||||| |||||||| Sbjct 7851 TCTTACCGGTGAGGGTTTTGACAAAGATCTGCAT 7884 Score = 84.2 bits (92), Expect = 2e-11 Identities = 148/214 (69%), Gaps = 4/214 (2%) Strand=Plus/Plus Query 16724 AGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCC 16783 || |||| |||||| || |||||||| || ||||| || || |||| || | || Sbjct 7217 AGCACCAGATGCAGTGTAGACTCCTTCTGAATGTTATAATCAGCCAGAGTACGTCCATCT 7276 Query 16784 TCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTC- 16842 || | ||| || || ||| |||| |||| ||| ||||| ||| | |||||||| || Sbjct 7277 TCTAGTTGCTTACCAGCAAAAATCAGCCTCTGCTGGTCAGGAGGGATACCCTCTTTATCC 7336 Query 16843 -GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGG 16901 || || || |||||| | | | ||||| |||| |||| ||| || | Sbjct 7337 TGGATCTTAGC--CTTCACGTTATCAATGGTGTCTGAACTCTCCACCTCCAAGGTAATAG 7394 Query 16902 TTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 |||| || ||||||||||| ||||| || ||||| Sbjct 7395 TTTTCCCCGTCAGCGTTTTCACAAAGATTTGCAT 7428 >seq67916 Length=22924 Score = 86.0 bits (94), Expect = 4e-12 Identities = 152/216 (70%), Gaps = 8/216 (4%) Strand=Plus/Plus Query 16724 AGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCC 16783 || || | |||||| ||||||||||| || || || ||||| || | ||| | | || Sbjct 19143 AGAACGAGATGCAGAGTGGACTCCTTCTGGATATTATAGTCAGCAAGTGTTCGGCCATCT 19202 Query 16784 TCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTC- 16842 || | || || || ||| |||| || ||||| ||||| ||| | ||| || ||||| Sbjct 19203 TCAAGCTGCTTTCCAGCAAAAATTAGACGCTGCTGGTCAGGAGGAATGCCTTCCTTGTCC 19262 Query 16843 -GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTC-CG-TTTCCACGGTGAT 16899 || || || |||||| | | | | |||| ||| |||| || ||||| || || Sbjct 19263 TGGATCTTGGC--CTTCACATTGTCGATGGTGT--CCGAGCTCTCGACTTCCAAAGTAAT 19318 Query 16900 GGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 || || ||||| || ||||| ||||| |||||||| Sbjct 19319 CGTCTTACCGGTGAGGGTTTTCACAAAGATCTGCAT 19354 >seq121729 Length=15342 Score = 84.2 bits (92), Expect = 2e-11 Identities = 148/214 (69%), Gaps = 4/214 (2%) Strand=Plus/Plus Query 16724 AGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCC 16783 || |||| |||||| || |||||||| || ||||| || || |||| || | || Sbjct 15086 AGCACCAGATGCAGAGTAGACTCCTTCTGAATGTTATAATCAGCCAGAGTACGTCCATCT 15145 Query 16784 TCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTC- 16842 |||| ||| || || ||| |||| |||| ||| ||||| ||| | |||||||| || Sbjct 15146 TCCAGTTGCTTACCAGCAAAAATCAGCCTCTGCTGGTCAGGAGGGATACCCTCTTTATCC 15205 Query 16843 -GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGG 16901 || || || |||||| | | | ||||| |||| || | ||| || | Sbjct 15206 TGGATCTTAGC--CTTCACGTTATCAATGGTGTCTGAACTCTCCACCTCTAAGGTAATAG 15263 Query 16902 TTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 |||| || ||||||||||| ||||| || ||||| Sbjct 15264 TTTTCCCCGTCAGCGTTTTCACAAAGATTTGCAT 15297 >seq62192 Length=24286 Score = 82.4 bits (90), Expect = 5e-11 Identities = 137/198 (69%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 16733 TGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCCTCCAATTGT 16792 || || ||||| |||||||| |||||||||||||| | || |||||||||| || Sbjct 20128 TGGAGAGTGGATTCCTTTTGGATGTTGTAGTCGGCGAGAGTGCGTCCGTCCTCCAACTGC 20187 Query 16793 TTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCGGCAATTTGC 16852 ||||| ||| | || || ||||| || || ||| | ||||| ||||| || | | Sbjct 20188 TTGCCAGCAAAGATGAGACGCTGCTGATCGGGAGGGATACCCTCCTTGTCCTGGATCTTC 20247 Query 16853 TGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTTTTTCCGGTC 16912 |||||| | | | | || || | |||| || | |||||| || ||||| ||| Sbjct 20248 GCCTTCACATTGTCAATGGTATCAGAGTTCTCCACCTCAAGGGTGATTGTCTTTCCAGTC 20307 Query 16913 AGCGTTTTGACAAAAATC 16930 | || || ||||| ||| Sbjct 20308 AATGTCTTTACAAATATC 20325 >seq57571 Length=25446 Score = 82.4 bits (90), Expect = 5e-11 Identities = 152/218 (70%), Gaps = 4/218 (2%) Strand=Plus/Minus Query 16724 AGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGC-GTC 16782 ||||| | || || ||||| |||||||| |||||||||||| | | | || || | ||| Sbjct 1998 AGTACGAGGTGGAGAGTGGATTCCTTTTGGATGTTGTAGTCGACGA-GATTGTGTCCGTC 1940 Query 16783 CTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTC 16842 |||||| || ||||| ||| | | || | | |||||| || | ||||||||||| Sbjct 1939 CTCCAACTGCTTGCCAGCAAAGACGAGACATTATTGGTCGGGAGTGATACCCTCTTTGTC 1880 Query 16843 -GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGG 16901 | | ||| | |||||| | | | | || || | |||| || | |||||||| Sbjct 1879 TTGGATCTTGGT-CTTCACATTGTCAATGGTATCAGAGCTCTCCACCTCAAGGGTGATGG 1821 Query 16902 TTTTTCCGGTCAGCGTTTTGACAAAAATCTGCATTTTG 16939 | ||||| | || || || ||||| |||| ||| ||| Sbjct 1820 TCTTTCCAGGCAATGTCTTCACAAATATCTACATATTG 1783 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 354465405248050