Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Picea_20abies_20[ConGenIE_20PRJEB1822-1.0_202015-05-12] 10,253,695 sequences; 12,301,475,675 total letters Query= NC_009503.1 Length=124121 Score E Sequences producing significant alignments: (Bits) Value seq497574 102 6e-17 seq704658 91.5 1e-13 seq512774 86.0 4e-12 seq67916 86.0 4e-12 seq193073 82.4 5e-11 >seq497574 Length=4355 Score = 102 bits (112), Expect = 6e-17 Identities = 156/220 (71%), Gaps = 2/220 (1%) Strand=Plus/Minus Query 33910 AGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGCCAATTGTCGC 33969 ||||| || || ||||| || || ||||||||||||||| || || |||| | | Sbjct 2333 AGCCGAAGGACAAGATGCAGGGTAGACTCCTTCTGAATGTTATAGTCCGCCAGAGTCCTC 2274 Query 33970 TCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCGGCACGCTCTCT 34029 | || || | |||||| || ||||| |||| | |||||||||| || | | ||| Sbjct 2273 CCATCTTCAAGTTGCTTTCCTGCAAAGATCAACCTCTGCTGATCCGGAGGAATCCCCTCC 2214 Query 34030 TTGTCCATAATTTTTTGCTTAATGGAACTCACACTATCAGTAGAT-TCGCATTCGACCGT 34088 |||||| ||| ||| ||| | | | | |||||| || | || ||||| ||| Sbjct 2213 TTGTCCTGAATCTTTGCCTTCACATTATCAATAGTATCAG-AGCTCTCAACTTCGAGCGT 2155 Query 34089 TATTGTTTTTCCGGTTAGTGTTTTCACAAAGATTTGCATT 34128 || || || ||||| || ||||||||||||||||||||| Sbjct 2154 AATGGTCTTGCCGGTCAGGGTTTTCACAAAGATTTGCATT 2115 >seq704658 Length=3035 Score = 91.5 bits (100), Expect = 1e-13 Identities = 153/219 (70%), Gaps = 2/219 (1%) Strand=Plus/Minus Query 33910 AGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGCCAATTGT-CG 33968 || || ||||||||||| || || ||||||||||||||| ||||| | ||| || || Sbjct 308 AGACGGAGCACCAGATGCAGAGTAGACTCCTTCTGAATGTTATAATCAG-CAAGAGTACG 250 Query 33969 CTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCGGCACGCTCTC 34028 | || ||||| ||||| || ||||| ||||| | ||||||||| || | || ||| Sbjct 249 TCCATCTTCCAACTGCTTACCAGCAAAAATCAGCCTCTGCTGATCGGGAGGGATGCCCTC 190 Query 34029 TTTGTCCATAATTTTTTGCTTAATGGAACTCACACTATCAGTAGATTCGCATTCGACCGT 34088 || ||| ||||||| ||| | | | | | || | | || || | || Sbjct 189 CTTATCCTGAATTTTTGCCTTCACGTTATCAATGGTGTCCGAACTCTCCACCTCCAAGGT 130 Query 34089 TATTGTTTTTCCGGTTAGTGTTTTCACAAAGATTTGCAT 34127 || ||||| || || || |||||||||||||| ||||| Sbjct 129 GATAGTTTTCCCCGTCAGGGTTTTCACAAAGATCTGCAT 91 >seq512774 Length=4225 Score = 86.0 bits (94), Expect = 4e-12 Identities = 152/219 (69%), Gaps = 2/219 (1%) Strand=Plus/Plus Query 33910 AGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGCCAATTGT-CG 33968 || || ||||||||||| || || ||||||||||||||| ||||| | ||| || || Sbjct 3796 AGACGAAGCACCAGATGCAGAGTAGACTCCTTCTGAATGTTATAATCAG-CAAGAGTACG 3854 Query 33969 CTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCGGCACGCTCTC 34028 | || ||||| ||||| || ||||| ||||| | |||||| || || | || ||| Sbjct 3855 TCCATCTTCCAACTGCTTACCAGCAAAAATCAGCCTCTGCTGGTCGGGAGGGATGCCCTC 3914 Query 34029 TTTGTCCATAATTTTTTGCTTAATGGAACTCACACTATCAGTAGATTCGCATTCGACCGT 34088 |||||| |||||| ||| | | | | | || | | || || | || Sbjct 3915 CTTGTCCTGAATTTTAGCCTTCACGTTATCAATGGTGTCCGAACTCTCCACCTCCAAGGT 3974 Query 34089 TATTGTTTTTCCGGTTAGTGTTTTCACAAAGATTTGCAT 34127 || ||||| || || || |||||||||||||| ||||| Sbjct 3975 GATGGTTTTCCCCGTCAGCGTTTTCACAAAGATCTGCAT 4013 >seq67916 Length=22924 Score = 86.0 bits (94), Expect = 4e-12 Identities = 152/219 (69%), Gaps = 2/219 (1%) Strand=Plus/Plus Query 33910 AGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGCCAATTGT-CG 33968 || || ||||||||||| || || ||||||||||||||| ||||| | ||| || || Sbjct 18681 AGACGGAGCACCAGATGCAGAGTAGACTCCTTCTGAATGTTATAATCAG-CAAGAGTACG 18739 Query 33969 CTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCGGCACGCTCTC 34028 | || ||||| ||||| || ||||| ||||| | ||||||||| || | || ||| Sbjct 18740 TCCATCTTCCAACTGCTTACCAGCAAAAATCAGCCTCTGCTGATCGGGAGGGATGCCCTC 18799 Query 34029 TTTGTCCATAATTTTTTGCTTAATGGAACTCACACTATCAGTAGATTCGCATTCGACCGT 34088 || ||| |||||| ||| | | | | | || | | || || | || Sbjct 18800 CTTATCCTGAATTTTAGCCTTCACGTTATCAATGGTGTCCGAACTCTCCACCTCCAAGGT 18859 Query 34089 TATTGTTTTTCCGGTTAGTGTTTTCACAAAGATTTGCAT 34127 || ||||| || || || |||||||||||||| ||||| Sbjct 18860 GATAGTTTTCCCCGTCAGGGTTTTCACAAAGATCTGCAT 18898 >seq193073 Length=10590 Score = 82.4 bits (90), Expect = 5e-11 Identities = 99/135 (73%), Gaps = 0/135 (0%) Strand=Plus/Plus Query 33900 ACCTCCTCTCAGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGC 33959 |||||| ||||| ||||| |||||||| || || |||||||| || ||||| || || Sbjct 4007 ACCTCCCCTCAGTCGCAGGACCAGATGCAGGGTCGATTCCTTCTGGATATTGTAGTCGGC 4066 Query 33960 CAATTGTCGCTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCGG 34019 || || | || |||| ||||| || || ||||||||||||||||| || ||| Sbjct 4067 CAGAGTCCGGCCATCTTCCAGCTGCTTTCCCGCGAATATCAGGCGCTGCTGGTCGGGCGG 4126 Query 34020 CACGCTCTCTTTGTC 34034 | | ||| ||||| Sbjct 4127 AATACCCTCCTTGTC 4141 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 347442739663390