Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Picea_20abies_20[ConGenIE_20PRJEB1822-1.0_202015-05-12] 10,253,695 sequences; 12,301,475,675 total letters Query= NC_009899.1 Length=344691 Score E Sequences producing significant alignments: (Bits) Value seq8953 100 5e-16 >seq8953 Length=51508 Score = 100 bits (110), Expect = 5e-16 Identities = 231/348 (66%), Gaps = 10/348 (3%) Strand=Plus/Plus Query 149151 TCATTTGGACCGCTGAGATTCGTCGGCATGACTGAGACGAAATTACATCCATATTGTTTT 149210 ||||||||||| ||||| || |||||| | || |||| ||||| |||| | Sbjct 25165 TCATTTGGACCATACAGATTAGTGGGCATGCCAGA-----AATTGCATCCCATTTGTACT 25219 Query 149211 -----CTGTAAGCATCACACATCTCGATTCCGGCGATTTTCGCTATCGCGTATGGTTTGT 149265 | || || | ||||||| || || || || || || || || || | || Sbjct 25220 GAAGACGATATGCTTGGCACATCTTTATCCCAGCAATCTTAGCAATAGCATACCACTCGT 25279 Query 149266 TAGTGGGTTCGAGAAATCCTGTCATCAGATATTCTTCCTTGATAGGATTTTGAGCTTCTT 149325 ||||||| || ||| || |||| || |||||| ||||||| | | || || Sbjct 25280 TAGTGGGCTCCAGAGGACCAGTCAAAAGTGCTTCTTCTGTGATAGGTTGCGGGGCAAATT 25339 Query 149326 TTGGGTAAATGCAACTGCTACCGAGAAACACGAGTTTTTTCACTCCGAACATTTTGGACG 149385 |||| ||||||||| ||| ||||||| || || |||||||| | | | | | Sbjct 25340 TTGGATAAATGCAAGAAGAACCCAGAAACAGCAGCTTCTTCACTCCATTCCTATAGCTTG 25399 Query 149386 CATGAATGACATTCGTCTGAATCATCAGATTATCGTGAATAAAATCGCCCCCGAAGGAGT 149445 ||| || ||||| || |||||| ||||||| | || ||||| | | | | | Sbjct 25400 CATCGATCACATTTGTTTGAATCTGCAGATTAATGGCTATGAAATCAGCAGGGTAAGTAT 25459 Query 149446 TGTTCGCGTGAATACCTCCTACTTTTGCAGCCGCGAGAAATACGTATT 149493 |||| || ||||||||||| ||||| || |||| || || ||| |||| Sbjct 25460 TGTTGGCATGAATACCTCCAACTTTCGCTGCCGTGACAATTACATATT 25507 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 957988624748250