Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Picea_20abies_20[ConGenIE_20PRJEB1822-1.0_202015-05-12] 10,253,695 sequences; 12,301,475,675 total letters Query= NC_010956.1 Length=35083 Score E Sequences producing significant alignments: (Bits) Value seq416950 407 3e-109 seq1393656 116 7e-22 >seq416950 Length=5269 Score = 407 bits (450), Expect = 3e-109 Identities = 1270/1943 (65%), Gaps = 54/1943 (3%) Strand=Plus/Plus Query 5465 GGGTCAAAAACCAGTTTTCCCCCGTTCTTTTTGATGCGCTTCTTACCTCGCGTCTCCATG 5524 || |||||||| || || || || || || || ||||| | ||||||| ||||||| Sbjct 821 GGATCAAAAACTAGCTTCCCTCCATTTTTCTTAATGCGGTGTTTACCTCTTTGCTCCATG 880 Query 5525 AGTCTGTGTCCGCGCTCGGTGACAAACAGGCTGTCGGTGTCCCCGTAGACGGACTTGATT 5584 || | ||| || ||||| ||||||| |||||| |||||||||||||| || || || Sbjct 881 AGCCGGTGCCCCTCTTCGGTCACAAACAAGCTGTCAGTGTCCCCGTAGACAGATTTTATA 940 Query 5585 GGCCTGTCCTGCAGGGGCGTCCCGCGGTCCTCCTCGTAGAGAAACTCGGACCACTCTGAG 5644 | | | || || ||| | || | ||| || |||| | ||| || | |||||| || Sbjct 941 GTTTTTTGATGTAGTGGCTTTCCTCTGTCTTCGGCGTATAAAAATTCTGCCCACTCAGAC 1000 Query 5645 ACAAAGGCGCGCGTCCACGCCAAGACAAAGGAGGCCACGTGCGAGGGGTAGCGGTCGTTG 5704 ||||| | | ||||| ||||| ||||| || || | ||| || | ||| | || ||| Sbjct 1001 ACAAATACTCTAGTCCAGGCCAAAACAAACGAAGCAATGTGGGAAGCGTACCTGTTGTTT 1060 Query 5705 TCCACTAGGGGGTCCACCTTTTCCACCGTGTGCAGACACATGTCCCCCTCCTCCGCATCC 5764 || | || || ||||| | ||||| | || ||||| | || || | || Sbjct 1061 TCTATTAAAGGAGAGTTGTTTTCTAAAGTGTGTAAGCATATGTCATCATCTTCAGTTTCT 1120 Query 5765 AAGAAGGTGATTGGCTTGTAGGTGTAGGCCACGTGACCGGGGGTCCCCGACgggggggTA 5824 || || ||||||||||| || | || | |||||||| | ||||| Sbjct 1121 AAAAACGTGATTGGCTTATACTTATATGTCACGTGACTATCTTT-----------GGGTA 1169 Query 5825 TAAAAGGGGGCGGGTCTGTGCTCGTCCTCACTCTCTTCCGCGTCGCTGTCCACGAGCGCC 5884 ||||| ||| | ||| | | || ||||| || || | || || | Sbjct 1170 TAAAAAGGGTGTGCTCTTCGTTT-TCATCACTTTCATC----TAACT---------CGGC 1215 Query 5885 AGCTGTTGG-GGTAGGTATTCCCTCTCGAGAGCGGGCATGACCTCGGCACTCAGGTTGTC 5943 || | || ||| |||| | | | | ||||| | || ||||| | |||||| Sbjct 1216 AGAAGGTGCAGGTGGGTAAGCTACGACAAATTCTGGCATAATTTCAGCACTAAAGTTGTC 1275 Query 5944 AGTTTCTAGAAACGAGGAGGATTTGATGTTGGCTTGCCCTGCCGCGATGCTTTTT-AGGA 6002 |||||||| || || || ||||||||| | ||| |||||| ||||| | | Sbjct 1276 AGTTTCTATGAATGATGAAGATTTGATGGAAAAGTTACCTCTGGCGATGGTTTTTGACGC 1335 Query 6003 GACTTTCATCCATCTGGTCAGAAAAGACTAtttttttATTGTCAAGCTTGGTGGCGAAGG 6062 | || | || | ||||| ||||| || |||||||| ||||| | || ||||| ||| Sbjct 1336 G-CTGGCTTCTAGTTGGTCTGAAAACACAATTTTTTTGTTGTCCAATTTAGTGGCAAAGC 1394 Query 6063 AGCCATAGAGGGCGTTGGATAGAAGCTTGGCGATGGATCTCATGGTCTGATTTTTGTCAC 6122 |||||| | ||||||||| || ||||| || ||| || |||||| || || || || Sbjct 1395 TGCCATATAAGGCGTTGGAAAGTAGCTTAGCTATGCTTCGCATGGTTTGGTTCTTTTCTT 1454 Query 6123 GGTCGGCGCGCTCCTTGGCCGCGATGTTTAGCTGGACATACTCGCGCGCGACGCACTTCC 6182 ||| || || ||||| ||||||||||||| || || || || |||||||||| Sbjct 1455 TGTCTGCTTTTTCTTTGGCTCCGATGTTTAGCTGCACGTATTCTTTGGCCACGCACTTCC 1514 Query 6183 ATTCGGGGAAGACGGTGGTGCGCTCGTCGGGCACGATCCTGACGCGCCAGCCGCGGTTAT 6242 | || ||||||| ||| || | ||||| || | || | || ||| || | ||| | Sbjct 1515 ACTCTGGGAAGATGGTTGTTCTTTCGTCTGGAAGAATGCGCACTGCCCATCCTCTGTTGT 1574 Query 6243 GCAGGGTGACCAGGTCCACGCTGGTGGCCACCTCGCCGCGCAGGGGCTCGTTGGTCCAGC 6302 ||| || | || ||| | || || || || || |||| |||||||| ||||||| Sbjct 1575 GCAAAGTAATCAAGTCTATAGAAGTAGCTACTTCTCCTCGCAAAGGCTCGTTAGTCCAGC 1634 Query 6303 AGAGTCTGCCGCCCTTGCGCGAGCAGAACGGGGGCAGCACATCAAGCAGATGCTCGTCAG 6362 | || || ||||| || | ||||| ||||| ||||| ||||||| | |||||| | Sbjct 1635 ACAGCCTTCCGCCTTTTCTGGAGCAAAACGGAGGCAGTTCATCAAGAAACAACTCGTCTG 1694 Query 6363 GGGGGTCCGCATCGATGGTGAAGATGCCCGGACAGAGTTCCTTGTCAAAATAATCGATTT 6422 | || ||||| ||||||||||| ||||| ||| || || ||||||||| || |||| Sbjct 1695 GAGGATCCGCGTCGATGGTGAAAATGCCTGGAAGAAGACACTCGTCAAAATAGTCAATTT 1754 Query 6423 TTGAGGATGC----ATCATCCAAGGCCATCTG--CCACTCGCGGGCGGCCAGCGCTCGCT 6476 || ||| | | ||| || |||| ||| || || || | |||| | Sbjct 1755 TT-----TGCTCTAAGTTTTCAA-GCTTTCTGATCCATTCTGTCGCAGCTAAGGCTCTTT 1808 Query 6477 CGTAGGGGTTGAGGGGCGGACCCCAGGGCATGGGATGAGTGAGGGCGGAGGCGTACATGC 6536 | || || || | ||| | || | ||| | ||||| || || || ||| ||||||| Sbjct 1809 CATACGGATTTAAAGGCTGCCCGCTGGGAAAAGGATGCGTTAGAGCACTGGCATACATGC 1868 Query 6537 CGCAGATGTCGTAGACATAGATGGGCTCCGAGAGGATGCCGATGTAGGTGGGATAACAGC 6596 |||||||||| || ||||| || |||| | |||||| || || |||||||| |||| Sbjct 1869 CGCAGATGTCATACACATAAATTGGCTGTTCCATGATGCCAATATAAGTGGGATAGCAGC 1928 Query 6597 GCCCCCCGCGGATGCTGGCGCGCACGTAGTCATACAACTCGTGCGAGGGGGCCAAGAAGG 6656 | || || |||||||| ||| ||||||||||||| || || || || || || || Sbjct 1929 GACCACCACGGATGCTCTGGCGGACGTAGTCATACATTTCATGAGATGGTGCTAATAAAA 1988 Query 6657 CG-GGGCCGAGATTGGTGCGCTGGGGCTGCTCGGCGCGGAAGACGATCTGGCGAAAGATG 6715 || | | || ||| | | || || | | | | | | || || ||| || Sbjct 1989 CGTTGTCTAAGTTTGCTTTATTTGGCCT-AACTTCTCTGTATAATATTTGCTTAAAAATT 2047 Query 6716 GCGTGCGAGTTGGAGGAGATGGTGGGCCGTTGGAAGATGTTAAAGTGGGCGTGGGGCAAG 6775 || || ||||| ||| || ||||| | ||| || |||||||| || | || ||| Sbjct 2048 GCATGAGAGTTAGAGCTAATAGTGGGTCTTTGAAAAATGTTAAATGAAGCATCAGGTAAG 2107 Query 6776 CGGAC-CGAGTCGCGGATGAAGTGCGCGTAGGAGTCTTGCAGCTTGGCGACGAGCTCGGC 6834 || ||| || || |||| ||| || ||||| || ||| || || | | Sbjct 2108 TTCACTTGAGAAGC-AATAAAGTTTTTGTAAGATTCTTGGAGTTTGTTTACTAGGGCCGA 2166 Query 6835 GGTGACGAGGACGTCCATGGCGCAGTAGTCCAGCGTTTCGCGGATGATGTCATAACCCGC 6894 || || | ||||| | || |||| |||||||| |||| ||||| ||| || | Sbjct 2167 TGTCACTAACACGTCTTGCACACAATAGTGCAGCGTTTGCTGGATTATGTCGTAAGCCCC 2226 Query 6895 CTCTCCTTTCTTCTC-CCACAGCTCGCGGTTGAGGGCGTACTCCTCGTCATCCTTCCAGT 6953 | | ||| ||||| |||||| | |||||| ||||| ||| ||||||| Sbjct 2227 CAC-GTTTTTTTCTCTCCACAGAGCCTTGTTGAGTTGATACTCTTCGCTGGATTTCCAGT 2285 Query 6954 ACTCCCGGAGCGGGAATCCTCGATCGTCCGCACGGTAAGAGCCCAGCATGTAGAAATGGT 7013 | || || || || || || ||||||| || | | ||||| | | Sbjct 2286 ATCTTAGGCTTGGAAAGCCATCCTCATCTTGTTGGTAAGACCCTATTCTATAGAATTCAT 2345 Query 7014 TCACGGCCTTGTAGGGACAGCAGCCCTTCTCCACGGGGAGGGCGTAAGCTTGAGCGGCCT 7073 | || || | ||| ||||||| || || || || || || ||||||| ||| || | Sbjct 2346 TTACTGCTTCGTACGGACAGCTTCCTTTTTCTACAGGCAGCTCGTAAGCCCCAGCAGCAT 2405 Query 7074 TGC-GGAGCGAGGTGTGCGTCAGGGCGAAGGTGTCCCTGACCATGACTTTCAAGAACTGG 7132 | | ||| | ||||| ||||| || || ||||| || ||||| | ||| | |||||| Sbjct 2406 TTCTTAAGCTA-GTGTGGGTCAGCGCAAAAGTGTCTCTTACCATAAATTTAACAAACTGG 2464 Query 7133 TACTTGAAATCCGAGTCGTCGCAGC-CGCCGTGCTCCCAGAGCTCGAAATCGGTGCGCTT 7191 |||||| |||| | | | ||| || |||||| ||||||| | || || Sbjct 2465 TACTTGTGGTCCGCGGC-TGTGAGCTTTCCACACTCCCAATCGGCGAAATCTTTTCG-TT 2522 Query 7192 CTTCG-AGAGGGGGTTAGGCAGAGC-GAAAGTGACGTCATTGAAGAGAATCTTGCCTGCT 7249 |||| | || ||||| | ||| |||| | ||||||||| || || || || | Sbjct 2523 TTTCGTACTTTGGATTAGGTA-AGCAAAAAGAAATGTCATTGAACAGTATTTTACCGTTT 2581 Query 7250 CGCGGCATGAAATTGCGGGTGATGCGGAAAGGGCCCGGGACGGAGGCTCGGTTGTTGATC 7309 | ||||| ||||| | | || ||||| | | || | || ||||| || Sbjct 2582 CTTGGCATAAAATTTCTATTTATTTTGAAAGCAGGCAGAACATCCGTTCTGTTGTGTATG 2641 Query 7310 ACCTGGGCGGCAAGGACGATCTCGTCGAAGCCGTTGATGTTGTGCCCGACGATGTAGAGT 7369 || || ||||| | |||||||| || || ||| ||||||||| || | | || | | Sbjct 2642 ACTTGCGCGGCCAACACGATCTCATCAAAACCGCAGATGTTGTGGCCAATTACATAAATT 2701 Query 7370 TCCATGAATCGCGGGCGGCCTTT 7392 || || || | || | |||||| Sbjct 2702 TCAATAAACTGTGGACTGCCTTT 2724 Score = 118 bits (130), Expect = 2e-22 Identities = 374/574 (65%), Gaps = 8/574 (1%) Strand=Plus/Plus Query 8463 GCGGTTGACATCCTGGATCTGCCGCCTCTGCGTGAAGACCACGGGCCCCGTGACTTTGAA 8522 |||||||| | ||| |||| |||| | || ||||| || || || ||| |||| Sbjct 3690 GCGGTTGATGTTCTGAATCTCCCGCAGGCCGGAAAATACCACTGGGCCGGTCACTCTGAA 3749 Query 8523 CCTGAAAGACAGTTCAACAGAATCAATCTCTGCGTCATTGACGGCGGCCTGACGCAGGAT 8582 ||||||||| | ||| | ||| ||||| ||||||||||| || || | || | || Sbjct 3750 CCTGAAAGATATTTCCATAGAGTCAATGTCTGCGTCATTAACTGCCACTTGCTTTAAAAT 3809 Query 8583 CTCTTGCACGTCGCCCGAGTTGTCCTGGTAGGCGATCTCGGTCATGAACTGTTCGATCTC 8642 ||| |||||| || ||| || || || || || || | ||| ||||| || ||||| Sbjct 3810 CTCACTCACGTCTCCGCTGTTATCGTGATAAGCTATTTCTGCCATAAACTGCTCAATCTC 3869 Query 8643 CTCCTCCTGGAGATCGCCGCGGCCCGCGCGCTCCACGGTGGCGGCGAGGTCATTGGAGAT 8702 |||| || | || || | || || | ||| || ||||| || | |||| || || Sbjct 3870 TTCCTGCTCTAACTCTCCTCTCCCTGCTCTCTCAACTGTGGCAGCCAAGTCAATGCTAAT 3929 Query 8703 GCGGCCCATGA-GCTGCGAGAAGGC-GCCCAGGCCGCTCTCGTTCCAGACGCGGCTGTAG 8760 ||| ||||| | | | | ||| | | | || | || ||||| || | |||||| Sbjct 3930 GCGAGACATGATGTTACTAAAAGCCTGTTC--CCCATTTTCATTCCACACTCTGCTGTAC 3987 Query 8761 ACCACGTCCCCGTCGGCGTCGCGTGCGCGCATGACCACCTGCGCGAGGTTGAGCTCCACG 8820 || | | || || ||| | || | ||| || |||||||| || || ||| ||| Sbjct 3988 ACAATTTGTCCATCTTCGTTTCTGGCTCTCATTACTACCTGCGCCAGATTAAGCATCACA 4047 Query 8821 TGCCGCGTGAAGACGGCGTAGTTGCGC--AGGCGCTGGAAGAGGTAGTTGAGGGTGGTGG 8878 | | | | | || | || | | | | | || | |||||| || ||||| | Sbjct 4048 TATCTC--CCAAAAGGGGAAGATACCCTAATTTGGTGATTTAAGTAGTTTAGTGTGGTAG 4105 Query 8879 CGATGTGCTCGGTGACGAAGAAGTACATGATCCAGCGGCGCAGGGGCATCTCGCTGATGT 8938 | ||||| || | || || ||| |||| | |||||| | || | | || | |||| Sbjct 4106 CAATGTGTTCTGCCACAAAAAAGAACATCACCCAGCGTTGGAGAGTTGTTTCATTAATGT 4165 Query 8939 CGCCGATGGCCTCCAGCCTTTCCATGGCCTCGTAGAAATCCACGGCGAAGTTGAAAAACT 8998 | || | ||||||| | | || |||| || |||| || || ||||| ||||||| Sbjct 4166 CACCTAGCGCCTCCAAACGCTGAATAACCTCATAAAAATTTACAGCAAAGTTAAAAAACT 4225 Query 8999 GGGCATTGCGGGCCGAGACCGTGAGCTCGTCTTC 9032 | || | || || || |||||||| ||||| Sbjct 4226 GCTGGTTTCTAGCAGACACAGTGAGCTCTTCTTC 4259 >seq1393656 Length=1543 Score = 116 bits (128), Expect = 7e-22 Identities = 353/540 (65%), Gaps = 8/540 (1%) Strand=Plus/Plus Query 8497 AAGACCACGGGCCCCGTGACTTTGAACCTGAAAGACAGTTCAACAGAATCAATCTCTGCG 8556 || ||||| || || || ||| ||||||||||||| | ||| | ||| ||||| |||||| Sbjct 32 AATACCACTGGGCCGGTCACTCTGAACCTGAAAGATATTTCCATAGAGTCAATGTCTGCG 91 Query 8557 TCATTGACGGCGGCCTGACGCAGGATCTCTTGCACGTCGCCCGAGTTGTCCTGGTAGGCG 8616 ||||| || || | || | ||||| |||||| || ||| || || || || Sbjct 92 TCATTAACTGCCACTTGCTTTAAAATCTCACTCACGTCTCCGCTGTTATCGTGATAAGCT 151 Query 8617 ATCTCGGTCATGAACTGTTCGATCTCCTCCTCCTGGAGATCGCCGCGGCCCGCGCGCTCC 8676 || || | ||| ||||| || ||||| |||| || | || || | || || | ||| Sbjct 152 ATTTCTGCCATAAACTGCTCAATCTCTTCCTGCTCTAACTCTCCTCTCCCTGCTCTCTCA 211 Query 8677 ACGGTGGCGGCGAGGTCATTGGAGATGCGGCCCATGA-GCTGCGAGAAGGC-GCCCAGGC 8734 || ||||| || | |||| || ||||| ||||| | | | | ||| | | | | Sbjct 212 ACTGTGGCAGCCAAGTCAATGCTAATGCGAGACATGATGTTACTAAAAGCCTGTTC--CC 269 Query 8735 CGCTCTCGTTCCAGACGCGGCTGTAGACCACGTCCCCGTCGGCGTCGCGTGCGCGCATGA 8794 | | || ||||| || | |||||| || | | || || ||| | || | ||| | Sbjct 270 CATTTTCATTCCACACTCTGCTGTACACAATTTGTCCATCTTCGTTTCTGGCTCTCATTA 329 Query 8795 CCACCTGCGCGAGGTTGAGCTCCACGTGCCGCGTGAAGACGGCGTAGTTGCGC--AGGCG 8852 | |||||||| || || ||| ||| | | | | | || | || | | | | | Sbjct 330 CTACCTGCGCCAGATTAAGCATCACATATCTC--CCAAAAGGGGAAGATACCCTAATTTG 387 Query 8853 CTGGAAGAGGTAGTTGAGGGTGGTGGCGATGTGCTCGGTGACGAAGAAGTACATGATCCA 8912 || | |||||| || ||||| || ||||| || | || || ||| |||| | ||| Sbjct 388 GTGATTTAAGTAGTTTAGTGTGGTAGCAATGTGTTCTGCCACAAAAAAGAACATCACCCA 447 Query 8913 GCGGCGCAGGGGCATCTCGCTGATGTCGCCGATGGCCTCCAGCCTTTCCATGGCCTCGTA 8972 ||| | || | | || | ||||| || | ||||||| | | || |||| || Sbjct 448 GCGTTGGAGAGTTGTTTCATTAATGTCACCTAGCGCCTCCAAACGCTGAATAACCTCATA 507 Query 8973 GAAATCCACGGCGAAGTTGAAAAACTGGGCATTGCGGGCCGAGACCGTGAGCTCGTCTTC 9032 |||| || || ||||| |||||||| || | || || || |||||||| ||||| Sbjct 508 AAAATTTACAGCAAAGTTAAAAAACTGCTGGTTTCTAGCAGACACAGTGAGCTCTTCTTC 567 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 98489051831550