Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Picea_20abies_20[ConGenIE_20PRJEB1822-1.0_202015-05-12] 10,253,695 sequences; 12,301,475,675 total letters Query= NC_011202.1 Length=34794 Score E Sequences producing significant alignments: (Bits) Value seq416950 551 1e-152 seq1393656 134 3e-27 >seq416950 Length=5269 Score = 551 bits (610), Expect = 1e-152 Identities = 1592/2410 (66%), Gaps = 85/2410 (4%) Strand=Plus/Plus Query 5039 AGTCTGTTCCACAGTTCAGTGATGTGTTCTATGGCA-TCTCGATCCAGCAGACCTCCTCG 5097 ||| | | ||||||||| | | ||||| | |||| | || ||||| || || || | | Sbjct 334 AGTTTATCCCACAGTTCTTTTACATGTTCCACGGCAGTGTC-ATCCAACATACATCGTTG 392 Query 5098 TTTCGCGGGTTTGGACGGCTCCTGGAATAGGGTATGAGACGATGGGCGTCCAGCGCTGCC 5157 |||| |||||||| | || | || || || || || || ||| |||| | || | Sbjct 393 TTTCTTGGGTTTGGTTG-CTTTTCGAGTAAGGCATCAGGCGGTGGCCGTCTATGTCTACA 451 Query 5158 AGGGTTCGGTCCTTCCAGGGTCTCAGTGTTCGAGTCAGGGTTGTTTCCGTCACAGTGAAG 5217 ||||| ||| ||||| || |||| ||| || || | |||||||| || || ||||| Sbjct 452 AGGGTCTTGTCTTTCCAAGGCCTCACTGTGCGCGTTAAAGTTGTTTCGGTGACTGTGAAC 511 Query 5218 GGGTGTGCGCCTGCTTGGGCGCTT-GCCAGGGTGCGCTTCAGACTCATCCTGCTGGTCGA 5276 ||| ||| ||||| || | | || ||||| || || | ||||| | |||||| Sbjct 512 GGGGCCGCGT-TGCTTTGGTTCGTAGCGAGGGTCCGTTTTAAACTCAGGCGGCTGGTGTG 570 Query 5277 AAACTTCTGTCGCTTGGCGCC--CTGTATGTCGGCCAAGTAGCAGTTTACCATGAGT-TC 5333 ||| ||| ||| | || ||| ||| | ||||||||| || ||| ||| || Sbjct 571 AAAGCGCTG--GCT---CCCCTGCTGCGCGTCAGACAAGTAGCATTTAGCCAA-AGTGTC 624 Query 5334 GTAGTTGAGCGCCTCGGCTGCGTGGCCTTTGGCGCGGAGCTTACCTTTGGAAGTTTTCTT 5393 || | | | ||| || || || || || || |||||||| | | Sbjct 625 ATAACATAATTCAGTAGTTGCATGACCCTTCGCCCGCAGTTTACCTTTACCCA----CAT 680 Query 5394 GCATACCGGGCAGTATAGGCA-----TTTCAGCGCATACAACTTGGGCGCAAGGAAAACG 5448 || || | |||| | || ||| | ||||||| || || || || || || Sbjct 681 GCCCACAGCA-AGTACAAACAGTGTTTTTTAAAGCATACAGTTTAGGAGCGAGAAAGACA 739 Query 5449 GATTCTGGGGAGTATGCATCTGCGCCGCAGGAGGCGCAAACAGTTTCACATTCCACCAGC 5508 ||||| | | ||||| | || | || ||| |||||||| |||| | Sbjct 740 GATTCAGAACTAAAAGCATCAGACTTACATTTTTCACACTGAGTCTCACATTCAACCAAC 799 Query 5509 CAGGTTAAATCCGGTTCATTGGGGTCAAAAACAAGTTTTCCGCCATATTTTTTGATGCGT 5568 || || | | || | || || |||||||| || || || |||| ||| || ||||| Sbjct 800 CATGTAATAGATGGGTTTTTTGGATCAAAAACTAGCTTCCCTCCATTTTTCTTAATGCGG 859 Query 5569 TTCTTACCTTTGGTCTCCATGAGTTCGTGTCCTCGTTGAGTGACAAACAGGCTGTCCGTG 5628 | |||||| | ||||||||| ||| || || || ||||||| |||||| ||| Sbjct 860 TGTTTACCTCTTTGCTCCATGAGCCGGTGCCCCTCTTCGGTCACAAACAAGCTGTCAGTG 919 Query 5629 TCCCCGTAGACTGATTTTACAGGCCTCTTCTCCAGTGGAGTGCCTCGGTCTTCTTCGTAC 5688 ||||||||||| ||||||| || | | | ||||| | |||| |||||| |||| Sbjct 920 TCCCCGTAGACAGATTTTATAGTTTTTTGATGTAGTGGCTTTCCTCTGTCTTCGGCGTAT 979 Query 5689 AGGAACTCTGACCACTCTGATACAAAGGCGCGCGTCCAGGCCAGCACAAAGGAGGCTATG 5748 | || |||| |||||| || ||||| | | |||||||||| ||||| || || ||| Sbjct 980 AAAAATTCTGCCCACTCAGACACAAATACTCTAGTCCAGGCCAAAACAAACGAAGCAATG 1039 Query 5749 TGGGAGGGGTAGCGATCGTTGTCAACCAGGGGGTCCACCTTTTCCAAAGTATGCAAACAC 5808 ||||| | ||| | | ||| || | | || ||||| ||||| || || || Sbjct 1040 TGGGAAGCGTACCTGTTGTTTTCTATTAAAGGAGAGTTGTTTTCTAAAGTGTGTAAGCAT 1099 Query 5809 ATGTCACCCTCTTCAACATCCAGGAATGTGATTGGCTTGTAGGTGTATTTCACGTGACCT 5868 |||||| | |||||| || | || ||||||||||| || | ||| ||||||||| Sbjct 1100 ATGTCATCATCTTCAGTTTCTAAAAACGTGATTGGCTTATACTTATATGTCACGTGACTA 1159 Query 5869 GGGGTCCCCGCTgggggggTATAAAAGGGGGCGGTTCTTTGCTCTTCCTCACTGTCTTCC 5928 | |||||||||| ||| | |||| | | ||| ||||| || || Sbjct 1160 TCTTT-----------GGGTATAAAAAGGGTGTGCTCTTCGTT-TTCATCACTTTCATCT 1207 Query 5929 GGATCGCTGTCCAGGAACGTCAGCTGTTGGGGTAGGTATTCCCTCTCGAAGGCGGGCATG 5988 ||| ||| || || || | |||| || || | || | ||||| Sbjct 1208 AACTCGG----CAG-AAGGT--GCAGGTGGGTAAGCTACGACA-----AATTCTGGCATA 1255 Query 5989 ACCTCTGCACTCAGGTTGTCAGTTTCTAAGAACGAGGAGGATTTGATATTGACAGTGCCG 6048 | || ||||| | |||||||||||||| ||| || || |||||||| | | || Sbjct 1256 ATTTCAGCACTAAAGTTGTCAGTTTCTATGAATGATGAAGATTTGATGGAAAAGTTACCT 1315 Query 6049 GTTGAGATGCCTTTCATGAGGTTTTCG--TCCATTTGGTCAGAAAACACAAtttttttAT 6106 | | |||| ||| ||| | | | || | |||||| ||||||||||||||||| | Sbjct 1316 CTGGCGATGGTTTT--TGACGCGCTGGCTTCTAGTTGGTCTGAAAACACAATTTTTTTGT 1373 Query 6107 TGTCAAGTTTGGTGGCAAATGATCCATACAGGGCGTTGGATAAAAGTTTGGCAATGGATC 6166 |||| | ||| |||||||| ||||| | ||||||||| | || || || ||| || Sbjct 1374 TGTCCAATTTAGTGGCAAAGCTGCCATATAAGGCGTTGGAAAGTAGCTTAGCTATGCTTC 1433 Query 6167 GCATGGTTTGGTTCTTTTCCTTGTCCGCGCGCTCTTTGGCGGCGATGTTGAGTTGGACAT 6226 ||||||||||||||||||| ||||| || |||||||| ||||||| || || || | Sbjct 1434 GCATGGTTTGGTTCTTTTCTTTGTCTGCTTTTTCTTTGGCTCCGATGTTTAGCTGCACGT 1493 Query 6227 ACTCGCGTGCCAGGCACTTCCATTCGGGGAAGATAGTTGTTAATTCATCTGGCACGATTC 6286 | || |||| ||||||||| || |||||||| |||||| ||| ||||| | || | Sbjct 1494 ATTCTTTGGCCACGCACTTCCACTCTGGGAAGATGGTTGTTCTTTCGTCTGGAAGAATGC 1553 Query 6287 TCACTTGCCACCCTCGATTATGCAAGGTAATTAAATCCACACTGGTGGCCACCTCGCCTC 6346 |||| ||| |||| || ||||| ||||| || || | | || || || || |||| Sbjct 1554 GCACTGCCCATCCTCTGTTGTGCAAAGTAATCAAGTCTATAGAAGTAGCTACTTCTCCTC 1613 Query 6347 GAAGGGGTTCATTGGTCCAACAGAGCCTACCTCCTTTCCTAGAACAGAAAGGGGGAAGTG 6406 | | || || || ||||| || ||||| || ||||| || || || || || || ||| Sbjct 1614 GCAAAGGCTCGTTAGTCCAGCACAGCCTTCCGCCTTTTCTGGAGCAAAACGGAGGCAGTT 1673 Query 6407 GGTCTAGCATAAGTTCATCGGGAGGGTCTGCATCCATGGTAAAGATTCCCGGAAGTAAAT 6466 || || | | || || ||||| || || || ||||| || || || ||||| | | Sbjct 1674 CATCAAGAAACAACTCGTCTGGAGGATCCGCGTCGATGGTGAAAATGCCTGGAAGAAGAC 1733 Query 6467 CCTTATCAAAATAGCTGATGGGAGTGGGGTCA--TCTAAGGCCATTTG--CCATTCTCGA 6522 || ||||||||| | | || | | | | | || | || ||||||| Sbjct 1734 ACTCGTCAAAATAG-TCAATTTTTTGCTCTAAGTTTTCAAGCTTTCTGATCCATTCTGTC 1792 Query 6523 GCTGCCAGTGCGCGCTCATATGGGTTAAGGGGACTGCCC-CATGGCATGGGATGGGTGAG 6581 || || | || | ||||| || || | || |||||| | || | ||||| || || Sbjct 1793 GCAGCTAAGGCTCTTTCATACGGATTTAAAGG-CTGCCCGCTGGGAAAAGGATGCGTTAG 1851 Query 6582 TGCAGAGGCATACATGCCACAGATGTCATAGACGTAGATGGGATCCTCAAAGATGCCTAT 6641 ||| |||||||||||| ||||||||||| || || || || | || | |||||| || Sbjct 1852 AGCACTGGCATACATGCCGCAGATGTCATACACATAAATTGGCTGTTCCATGATGCCAAT 1911 Query 6642 GTAGGTTGGATAGCATCGCCCCCCTCTGATACTTGCTCGCACATAGTCATATAGTTCATG 6701 || || |||||||| || || || | ||| || || || |||||||| | |||||| Sbjct 1912 ATAAGTGGGATAGCAGCGACCACCACGGATGCTCTGGCGGACGTAGTCATACATTTCATG 1971 Query 6702 TGATGGCGCTAGCAGCCCCGGACCCAAGTTGGTGCGATTGGGTTTTTCTGTTCTGTAGAC 6761 ||||| |||| | | | ||||| | ||| || | || |||||| | Sbjct 1972 AGATGGTGCTAATAAAACGTTGTCTAAGTTTGCTTTATTTGGCCTAACTTCTCTGTATAA 2031 Query 6762 GATCTGGCGAAAGATGGCGTGAGAATTGGAAGAGATGGTGGGTCTTTGAAAAATGTTGAA 6821 || || ||| || || ||||| || || || |||||||||||||||||||| || Sbjct 2032 TATTTGCTTAAAAATTGCATGAGAGTTAGAGCTAATAGTGGGTCTTTGAAAAATGTT-AA 2090 Query 6822 ATG-GGCATGAGGT-AGACCTACAGAGTCTCTGACAAAGTGGGCATAAGATTCTTGAAGC 6879 ||| |||| |||| || | ||| | | ||||| ||||||||||| || Sbjct 2091 ATGAAGCATCAGGTAAGTTCACTTGAGAAGC-AATAAAGTTTTTGTAAGATTCTTGGAGT 2149 Query 6880 TTGGTTACCAGTTCGGCGGTGACAAGTACGTCTAGGGCGCAGTAGTCAAGTGTTTCTTGA 6939 ||| |||| || | | || || | |||||| | | || |||| || |||| || Sbjct 2150 TTGTTTACTAGGGCCGATGTCACTAACACGTCTTGCACACAATAGTGCAGCGTTTGCTGG 2209 Query 6940 ATGATGTCATAA----CCTGGTTGGTTTTTCTTTTCCCACAGTTCGCGGTTGAGAAGGTA 6995 || ||||| ||| || ||| ||||||| | |||||| | |||||| | || Sbjct 2210 ATTATGTCGTAAGCCCCCACGTT--TTTTTCTCT--CCACAGAGCCTTGTTGAGTTGATA 2265 Query 6996 TTCTTCGC--GATCCTTCCAGTACTCTTCTAGC--GGAAACCCGTCTTTGTCTGCACGGT 7051 ||||||| ||| |||||||| |||| || ||||| || || | ||| ||| Sbjct 2266 CTCTTCGCTGGAT--TTCCAGTA-TCTT-AGGCTTGGAAAGCCATCCTCATCTTGTTGGT 2321 Query 7052 AAGATCCTAGCATGTAGAACTGATTAACTGCCTTGTAAGGGCAGCAGCCCTTCTCTACGG 7111 |||| |||| | ||||| | ||| ||||| | ||| || |||| || || ||||| | Sbjct 2322 AAGACCCTATTCTATAGAATTCATTTACTGCTTCGTACGGACAGCTTCCTTTTTCTACAG 2381 Query 7112 GTAGAGAGTATGCTTGAGCAGCTTTTCGTAGCGAAGCGTGAGTAAGGGCAAAGGTGTCTC 7171 | || ||| || |||||| |||| || || ||| || || ||||| ||||||| Sbjct 2382 GCAGCTCGTAAGCCCCAGCAGCATTTCTTAAGCTAGTGTGGGTCAGCGCAAAAGTGTCTC 2441 Query 7172 TGACCATGACTTTGAGAAATTGGTATTTGAAGT-CGATGTCGTCACAGGC--TCCCTGTT 7228 | ||||| | ||| | ||| ||||| ||| || || | || | || ||| | Sbjct 2442 TTACCATAAATTTAACAAACTGGTACTTGTGGTCCGCGGCTGTGA---GCTTTCCACACT 2498 Query 7229 CCCAGAGTTGGAAGTCTACCCGTTTCTTGTAGGCGGGGTTGGGCAAAGCGAAAGTAACAT 7288 |||| ||| ||| ||||| | ||| || || || || |||| || | Sbjct 2499 CCCAATCGGCGAAATCTTTTCGTTTTTCGTACTTTGGATTAGGTAAGCAAAAAGAAATGT 2558 Query 7289 CATTGAAGAGAATCTTACCGGCTCTGGGCATAAAATTGCGAGTGATGCGAAAAGGCTGTG 7348 ||||||| || || |||||| ||| ||||||||||| | | | || |||| | Sbjct 2559 CATTGAACAGTATTTTACCGTTTCTTGGCATAAAATTTCTATTTATTTTGAAAGCAGGCA 2618 Query 7349 GTACTTCCGCTCGATTGTTGATCACCTGGGCAGCTAGGACGATCTCGTCGAAACCGTTGA 7408 | || |||| || |||| || || || || || | |||||||| || |||||| || Sbjct 2619 GAACATCCGTTCTGTTGTGTATGACTTGCGCGGCCAACACGATCTCATCAAAACCGCAGA 2678 Query 7409 TGTTGTGTCC 7418 ||||||| || Sbjct 2679 TGTTGTGGCC 2688 Score = 134 bits (148), Expect = 3e-27 Identities = 373/571 (65%), Gaps = 16/571 (3%) Strand=Plus/Plus Query 8635 TGAACCTGAAAGAGAGTTCAACAGAATCAATTTCGGTATCGTTAACGGCAGCTTGTCTCA 8694 ||||||||||||| | ||| | ||| ||||| || | || ||||| || |||| | | Sbjct 3746 TGAACCTGAAAGATATTTCCATAGAGTCAATGTCTGCGTCATTAACTGCCACTTGCTTTA 3805 Query 8695 GTATTTCTTGTACGTCACCAGAGTTGTCCTGGTAGGCGATCTCCGCCATGAACTGCTCGA 8754 || || ||||| || ||| || || || || || || ||||| |||||||| | Sbjct 3806 AAATCTCACTCACGTCTCCGCTGTTATCGTGATAAGCTATTTCTGCCATAAACTGCTCAA 3865 Query 8755 TTTCTTCCTCCTGAAGATCTCCGCGACCCGCTCTTTCGACGGTGGCCGCGAGGTCATTGG 8814 | ||||||| || | ||||| | || ||||| || || ||||| || | |||| || Sbjct 3866 TCTCTTCCTGCTCTAACTCTCCTCTCCCTGCTCTCTCAACTGTGGCAGCCAAGTCAATGC 3925 Query 8815 AGATACGGCCCATGA-GTTGGGAGAATGCATTCATGCCCGCCTCGTTCCAGACGCGGCTG 8873 || || ||||| ||| | || || | || || ||||| || | |||| Sbjct 3926 TAATGCGAGACATGATGTTACTAAAA-GCCTGTTCCCCATTTTCATTCCACACTCTGCTG 3984 Query 8874 TAAACCACGGCCCCCTCGGAGTCTCTTGCGCGCATCACCACCTGAGCGAGGTTAAGCTCC 8933 || || | || || || ||| || | ||| || ||||| || || |||||| | Sbjct 3985 TACACAATTTGTCCATCTTCGTTTCTGGCTCTCATTACTACCTGCGCCAGATTAAGCATC 4044 Query 8934 ACGTGTCT-------GGTGAAGACCGCATAGTTGCATAGGCGCTGAAAAAGGTAGTTGAG 8986 || | ||| || ||||| | || || | ||| | |||||| || Sbjct 4045 ACATATCTCCCAAAAGGGGAAGATACCCTAATTT-------GGTGATTTAAGTAGTTTAG 4097 Query 8987 TGTGGTGGCAATGTGTTCGGCGACGAAGAAATACATGATCCATCGTCTCAGCGGCATTTC 9046 |||||| ||||||||||| || || || || |||| | ||| ||| || | |||| Sbjct 4098 TGTGGTAGCAATGTGTTCTGCCACAAAAAAGAACATCACCCAGCGTTGGAGAGTTGTTTC 4157 Query 9047 GCTAACATCGCCCAGAGCTTCCAAGCGCTCCATGGCCTCGTAGAAGTCCACGGCAAAATT 9106 ||| || || || || ||||| |||| || |||| || || | || ||||| || Sbjct 4158 ATTAATGTCACCTAGCGCCTCCAAACGCTGAATAACCTCATAAAAATTTACAGCAAAGTT 4217 Query 9107 AAAAAACTGGGAGTTTCGCGCGGACACGGTCAATTCCTCCTCGAGAAGACGGATGAGTTC 9166 ||||||||| ||||| || ||||| || | || || || | | || ||| ||| Sbjct 4218 AAAAAACTGCTGGTTTCTAGCAGACACAGTGAGCTCTTCTTCTAATAAGCGAATGGTTTC 4277 Query 9167 GGCTATGGTGGCCCGTACTTCGCGTTCGAAG 9197 || | | || || ||||||| ||| ||| Sbjct 4278 TGCCACAGCGGTCCTAACTTCGCTTTCAAAG 4308 >seq1393656 Length=1543 Score = 134 bits (148), Expect = 3e-27 Identities = 373/571 (65%), Gaps = 16/571 (3%) Strand=Plus/Plus Query 8635 TGAACCTGAAAGAGAGTTCAACAGAATCAATTTCGGTATCGTTAACGGCAGCTTGTCTCA 8694 ||||||||||||| | ||| | ||| ||||| || | || ||||| || |||| | | Sbjct 54 TGAACCTGAAAGATATTTCCATAGAGTCAATGTCTGCGTCATTAACTGCCACTTGCTTTA 113 Query 8695 GTATTTCTTGTACGTCACCAGAGTTGTCCTGGTAGGCGATCTCCGCCATGAACTGCTCGA 8754 || || ||||| || ||| || || || || || || ||||| |||||||| | Sbjct 114 AAATCTCACTCACGTCTCCGCTGTTATCGTGATAAGCTATTTCTGCCATAAACTGCTCAA 173 Query 8755 TTTCTTCCTCCTGAAGATCTCCGCGACCCGCTCTTTCGACGGTGGCCGCGAGGTCATTGG 8814 | ||||||| || | ||||| | || ||||| || || ||||| || | |||| || Sbjct 174 TCTCTTCCTGCTCTAACTCTCCTCTCCCTGCTCTCTCAACTGTGGCAGCCAAGTCAATGC 233 Query 8815 AGATACGGCCCATGA-GTTGGGAGAATGCATTCATGCCCGCCTCGTTCCAGACGCGGCTG 8873 || || ||||| ||| | || || | || || ||||| || | |||| Sbjct 234 TAATGCGAGACATGATGTTACTAAAA-GCCTGTTCCCCATTTTCATTCCACACTCTGCTG 292 Query 8874 TAAACCACGGCCCCCTCGGAGTCTCTTGCGCGCATCACCACCTGAGCGAGGTTAAGCTCC 8933 || || | || || || ||| || | ||| || ||||| || || |||||| | Sbjct 293 TACACAATTTGTCCATCTTCGTTTCTGGCTCTCATTACTACCTGCGCCAGATTAAGCATC 352 Query 8934 ACGTGTCT-------GGTGAAGACCGCATAGTTGCATAGGCGCTGAAAAAGGTAGTTGAG 8986 || | ||| || ||||| | || || | ||| | |||||| || Sbjct 353 ACATATCTCCCAAAAGGGGAAGATACCCTAATTT-------GGTGATTTAAGTAGTTTAG 405 Query 8987 TGTGGTGGCAATGTGTTCGGCGACGAAGAAATACATGATCCATCGTCTCAGCGGCATTTC 9046 |||||| ||||||||||| || || || || |||| | ||| ||| || | |||| Sbjct 406 TGTGGTAGCAATGTGTTCTGCCACAAAAAAGAACATCACCCAGCGTTGGAGAGTTGTTTC 465 Query 9047 GCTAACATCGCCCAGAGCTTCCAAGCGCTCCATGGCCTCGTAGAAGTCCACGGCAAAATT 9106 ||| || || || || ||||| |||| || |||| || || | || ||||| || Sbjct 466 ATTAATGTCACCTAGCGCCTCCAAACGCTGAATAACCTCATAAAAATTTACAGCAAAGTT 525 Query 9107 AAAAAACTGGGAGTTTCGCGCGGACACGGTCAATTCCTCCTCGAGAAGACGGATGAGTTC 9166 ||||||||| ||||| || ||||| || | || || || | | || ||| ||| Sbjct 526 AAAAAACTGCTGGTTTCTAGCAGACACAGTGAGCTCTTCTTCTAATAAGCGAATGGTTTC 585 Query 9167 GGCTATGGTGGCCCGTACTTCGCGTTCGAAG 9197 || | | || || ||||||| ||| ||| Sbjct 586 TGCCACAGCGGTCCTAACTTCGCTTTCAAAG 616 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 97676857910040