Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Picea_20abies_20[ConGenIE_20PRJEB1822-1.0_202015-05-12] 10,253,695 sequences; 12,301,475,675 total letters Query= NC_011203.1 Length=35343 Score E Sequences producing significant alignments: (Bits) Value seq416950 419 5e-113 seq1393656 100 6e-17 >seq416950 Length=5269 Score = 419 bits (464), Expect = 5e-113 Identities = 1250/1908 (66%), Gaps = 59/1908 (3%) Strand=Plus/Plus Query 5514 GGGTCAAAAACAAGTTTTCCGCCATGTTTTTTGATGCGTTTCTTACCTTTGGTTTCCATG 5573 || |||||||| || || || |||| ||| || ||||| | |||||| | |||||| Sbjct 821 GGATCAAAAACTAGCTTCCCTCCATTTTTCTTAATGCGGTGTTTACCTCTTTGCTCCATG 880 Query 5574 AGTTCGTGTCCCCGCTGGGTGACAAAGAGGCTGTCCGTGTCCCCGTAGACCGACTTTATG 5633 || ||| ||| | ||| ||||| | |||||| |||||||||||||| || ||||| Sbjct 881 AGCCGGTGCCCCTCTTCGGTCACAAACAAGCTGTCAGTGTCCCCGTAGACAGATTTTATA 940 Query 5634 GGCCTGTCCTCGAGCGGAGTGCCTCGGTCCTCTTCGTAGAGGAACCCAGCCCACTCTGAT 5693 | | | | || || | |||| ||| || |||| | || | |||||||| || Sbjct 941 GTTTTTTGATGTAGTGGCTTTCCTCTGTCTTCGGCGTATAAAAATTCTGCCCACTCAGAC 1000 Query 5694 ACAAAAGCGCGTGTCCAGGCCAGCACAAAGGAGGCCACGTGGGAGGGGTAGCGGTCGTTG 5753 ||||| | | |||||||||| ||||| || || | |||||| | ||| | || ||| Sbjct 1001 ACAAATACTCTAGTCCAGGCCAAAACAAACGAAGCAATGTGGGAAGCGTACCTGTTGTTT 1060 Query 5754 TCAACCAGGGGGTCCACCTTCTCTACGGTATGTAAACACATGTCCCCCTCCTCCACATCC 5813 || | | || || |||| || ||||| || ||||| | || || || Sbjct 1061 TCTATTAAAGGAGAGTTGTTTTCTAAAGTGTGTAAGCATATGTCATCATCTTCAGTTTCT 1120 Query 5814 AAGAATGTGATTGGCTTGTAAGTGTAGGCCACGTGACCAGGGGTCCCCGCCgggggggTA 5873 || || ||||||||||| || | || | |||||||| | | ||||| Sbjct 1121 AAAAACGTGATTGGCTTATACTTATATGTCACGTGACTATCTTT-----------GGGTA 1169 Query 5874 TAAAAGGGGGCGGGCCTCTGTTCGTCCTCACTGTCTTCCGGATCGCTGTCCAGGAGCGCC 5933 ||||| ||| | || ||| || ||||| || || ||| ||| || | Sbjct 1170 TAAAAAGGGTGTGCTCTTCGTTT-TCATCACTTTCATCTAACTCGG----CAGAAGGTGC 1224 Query 5934 AGCTGTTGGGGTAGGTATTCCCTCTCGAAGGCGGGCATGACCTCTGCACTCAGGTTGTCA 5993 || || |||| | | || | ||||| | || ||||| | ||||||| Sbjct 1225 AGGTG--------GGTAAGCTACGACAAATTCTGGCATAATTTCAGCACTAAAGTTGTCA 1276 Query 5994 GTTTCTAGGAACGAGGAGGATTTGATATTGACAGTACCAGCAGAGATGCCTTTCATAAGA 6053 ||||||| ||| || || |||||||| | |||| | |||| ||| | | Sbjct 1277 GTTTCTATGAATGATGAAGATTTGATGGAAAAGTTACCTCTGGCGATGGTTTT--TGACG 1334 Query 6054 CTCTCG--TCCATCTGGTCAGAAAACACAATCTTCTTGTTGTCCAGCTTGGTGGCAAATG 6111 | || | || | ||||| ||||||||||| || |||||||||| || |||||||| Sbjct 1335 CGCTGGCTTCTAGTTGGTCTGAAAACACAATTTTTTTGTTGTCCAATTTAGTGGCAAAGC 1394 Query 6112 ATCCATAGAGGGCATTGGATAGAAGCTTGGCGATGGAGCGCATGGTTTGGTTCTTTTCCT 6171 ||||| | ||| ||||| || ||||| || ||| |||||||||||||||||||| | Sbjct 1395 TGCCATATAAGGCGTTGGAAAGTAGCTTAGCTATGCTTCGCATGGTTTGGTTCTTTTCTT 1454 Query 6172 TGTCCGCGCGCTCCTTGGCGGTGATGTTAAGCTGGACGTACTCGCGCGCCACACATTTCC 6231 |||| || || ||||| |||||| ||||| ||||| || ||||| || |||| Sbjct 1455 TGTCTGCTTTTTCTTTGGCTCCGATGTTTAGCTGCACGTATTCTTTGGCCACGCACTTCC 1514 Query 6232 ATTCAGGAAAGATGGTTGTCAGTTCATCCGGAACTATTCTGATTCGCCATCCCCTATTGT 6291 | || || ||||||||||| ||| || |||| || | | | |||||| || |||| Sbjct 1515 ACTCTGGGAAGATGGTTGTTCTTTCGTCTGGAAGAATGCGCACTGCCCATCCTCTGTTGT 1574 Query 6292 GCAGGGTTATCAGATCCACACTGGTGGCCACCTCGCCTCGGAGGGGCTCATTGGTCCAGC 6351 ||| || |||| || | | || || || || ||||| | ||||| || ||||||| Sbjct 1575 GCAAAGTAATCAAGTCTATAGAAGTAGCTACTTCTCCTCGCAAAGGCTCGTTAGTCCAGC 1634 Query 6352 AGAGTCGACCTCCTTTTCTTGAACAGAAAggggggagggggTCTAGCATGAACTCATCAG 6411 | || | || |||||||| || || || || || || || || | ||||| || | Sbjct 1635 ACAGCCTTCCGCCTTTTCTGGAGCAAAACGGAGGCAGTTCATCAAGAAACAACTCGTCTG 1694 Query 6412 GGGGGTCCGCATCTATGGTAAATATTCCCGGTAGCAAATCTTTGTCAAAATAGCTGA--T 6469 | || ||||| || ||||| || || || || || | | | |||||||||| | | Sbjct 1695 GAGGATCCGCGTCGATGGTGAAAATGCCTGGAAGAAGACACTCGTCAAAATAGTCAATTT 1754 Query 6470 GGTGGCGGGATCATCCAAGGTCATCTG--CCATTCTCGAACTGCCAGCGCGCGCTCATAG 6527 || | | |||| | |||| ||||||| | || | || | ||||| Sbjct 1755 TTTGCTCTAAGTTTTCAAGCT-TTCTGATCCATTCTGTCGCAGCTAAGGCTCTTTCATAC 1813 Query 6528 GGGTTAAGAGGGGTGCCC-CAGGGCATGGGGTGGGTGAGCGCGGAGGCATACATGCCACA 6586 || || | | || ||||| | ||| | || || || || || |||||||||||| || Sbjct 1814 GGATTTA-AAGGCTGCCCGCTGGGAAAAGGATGCGTTAGAGCACTGGCATACATGCCGCA 1872 Query 6587 GATATCGTAGACATAGAGGGGCTCTTCGAGGATGCCGATGTAAGTGGGATAACATCGCCC 6646 ||| || || ||||| | |||| ||| | |||||| || ||||||||||| || || || Sbjct 1873 GATGTCATACACATAAATTGGCTGTTCCATGATGCCAATATAAGTGGGATAGCAGCGACC 1932 Query 6647 CCCTCTGATGCTTGCTCGCACATAGTCATAGAGTTCATGTGAGGGGGC-AAGAAGACCCG 6705 || | |||||| || || |||||||| | |||||| || || || || || || Sbjct 1933 ACCACGGATGCTCTGGCGGACGTAGTCATACATTTCATGAGATGGTGCTAATAAAACGTT 1992 Query 6706 GGCCCAGATTGGTGCGGTTGGGTTTTTCCGCCCTGTAAACGATCTGGCGAAAGATGGCAT 6765 | | || ||| | || || | | | ||||| | || || ||| || |||| Sbjct 1993 GTCTAAGTTTGCT-TTATTTGGCCTAACTTCTCTGTATAATATTTGCTTAAAAATTGCAT 2051 Query 6766 GGGAATTGGAAGAGATAGTAGGTCTCTGGAATATGTTAAAATGGGCATGAGGTAAGCCTA 6825 | || || || ||||| ||||| || || |||||||| |||| ||||||| | Sbjct 2052 GAGAGTTAGAGCTAATAGTGGGTCTTTGAAAAATGTTAAATGAAGCATCAGGTAAGTTCA 2111 Query 6826 C-AGAGTCCCTTATGAAGTGGGCATATGACTCTTGCAGCTTGGCTACCAGCTCGGCGGTG 6884 | ||| | || |||| || || ||||| || ||| ||| || | | || Sbjct 2112 CTTGAGAAGC-AATAAAGTTTTTGTAAGATTCTTGGAGTTTGTTTACTAGGGCCGATGTC 2170 Query 6885 ATGAGTACATCCAGGGCACAGTAGTCGAGAGTTTCCTGGATGATGTCATAACGCGGTTGG 6944 | | || || | |||| |||| || |||| |||||| ||||| ||| | | Sbjct 2171 ACTAACACGTCTTGCACACAATAGTGCAGCGTTTGCTGGATTATGTCGTAAGCCCCCACG 2230 Query 6945 CTTTTCTTTTCCCACAGCTCGCGGTTGAGAAGGTATTCTTCG--TGATCCTTCCAGTACT 7002 |||| | | |||||| | |||||| | || |||||| ||| |||||||| | Sbjct 2231 TTTTTTTCTCTCCACAGAGCCTTGTTGAGTTGATACTCTTCGCTGGAT--TTCCAGTA-T 2287 Query 7003 CTTCGAGG---GGAAACCCGTCTTTTTCTGCACGGTAAGAGCCCAACATGTAGAACTGAT 7059 ||| ||| ||||| || || | ||| ||||||| || | | ||||| | || Sbjct 2288 CTT--AGGCTTGGAAAGCCATCCTCATCTTGTTGGTAAGACCCTATTCTATAGAATTCAT 2345 Query 7060 TGACTGCCTTGTAGGGACAGCATCCCTTCTCCACTGGGAGAGAGTATGCTTGGGCTGCAT 7119 | ||||| | ||| ||||||| ||| || || || || || ||| || || |||| Sbjct 2346 TTACTGCTTCGTACGGACAGCTTCCTTTTTCTACAGGCAGCTCGTAAGCCCCAGCAGCAT 2405 Query 7120 TGC-GCAGCGAGGTATGAGTGAGGGCAAAAGTGTCCCTGACCATGACTTTGAGGAATTGA 7178 | | ||| | || || || || ||||||||||| || ||||| | ||| | || || Sbjct 2406 TTCTTAAGCTA-GTGTGGGTCAGCGCAAAAGTGTCTCTTACCATAAATTTAACAAACTGG 2464 Query 7179 TACTTGAAGTC----GATGTCATCACAGGCCCCCTGTTCCCAGAGTTGGAAGTCCACCCG 7234 |||||| ||| | ||| | | || ||||| ||| || || Sbjct 2465 TACTTGTGGTCCGCGGCTGTGAGC----TTTCCACACTCCCAATCGGCGAAATCTTTTCG 2520 Query 7235 CTTCTTGTAGGCGGGGTTGGGCAAAGCGAAAGTAACATCATTGAAGAGGATCTTGCCGGC 7294 || | ||| || || || || |||| || |||||||| || || || ||| Sbjct 2521 TTTTTCGTACTTTGGATTAGGTAAGCAAAAAGAAATGTCATTGAACAGTATTTTACCGTT 2580 Query 7295 CCTGGGCATGAAATTTCGGGTGATTTTGAAAGGCTGAGGAACCTCTGCTCGGTTATTGAT 7354 || ||||| ||||||| | |||||||||| | |||| || | || ||| | || Sbjct 2581 TCTTGGCATAAAATTTCTATTTATTTTGAAAGCAGGCAGAACATCCGTTCTGTTGTGTAT 2640 Query 7355 AACCTGAGCGGCCAAGACGATCTCATCAAAGCCATTGATGTTGTGCCC 7402 || || |||||||| |||||||||||||| || ||||||||| || Sbjct 2641 GACTTGCGCGGCCAACACGATCTCATCAAAACCGCAGATGTTGTGGCC 2688 Score = 100 bits (110), Expect = 6e-17 Identities = 335/521 (64%), Gaps = 14/521 (3%) Strand=Plus/Plus Query 8619 TGAACCTGAAAGAGAGTTCAACAGAATCAATCTCGGTATCGTTGACGGCGGCTTGCCTAA 8678 ||||||||||||| | ||| | ||| ||||| || | || || || || ||||| | | Sbjct 3746 TGAACCTGAAAGATATTTCCATAGAGTCAATGTCTGCGTCATTAACTGCCACTTGCTTTA 3805 Query 8679 GGATTTCTTGCACGTCGCCAGAGTTGTCCTGGTAGGCGATCTCGGCCATGAACTGCTCGA 8738 || || |||||| || ||| || || || || || || ||||| |||||||| | Sbjct 3806 AAATCTCACTCACGTCTCCGCTGTTATCGTGATAAGCTATTTCTGCCATAAACTGCTCAA 3865 Query 8739 TCTCTTCCTCTTGAAGATCTCCGCGGCCCGCTCTCTCGACGGTGGCCGCGAGGTCGTTGG 8798 ||||||||| | | ||||| | || |||||||| || ||||| || | ||| || Sbjct 3866 TCTCTTCCTGCTCTAACTCTCCTCTCCCTGCTCTCTCAACTGTGGCAGCCAAGTCAATGC 3925 Query 8799 AGATGCGCCCAATGAGTTGAGAGAATGCATTCATGCCCGCCTCGTTCCAGACGCGGCTGT 8858 ||||| |||| | | || || | || || ||||| || | ||||| Sbjct 3926 TAATGCGAGACATGATGTTACTAAAAGCCTGTTCCCCATTTTCATTCCACACTCTGCTGT 3985 Query 8859 AGACCACAGCCCCCACGGGATCTCTCGCGCGCATGACCACCTGGGCGAGGTTGAGCTCCA 8918 | || | || | | ||| || | ||| || ||||| || || || ||| || Sbjct 3986 ACACAATTTGTCCATCTTCGTTTCTGGCTCTCATTACTACCTGCGCCAGATTAAGCATCA 4045 Query 8919 CGTGGC-------GGGTGAAGACCGCATAGTTGCATAGGCGCTGGAAAAGGTAGTTGAGT 8971 | | | || ||||| | || | | || | | || |||||| ||| Sbjct 4046 CATATCTCCCAAAAGGGGAAGATACCCTAAT----TTGGTGATTTAA---GTAGTTTAGT 4098 Query 8972 GTGGTGGCGATGTGCTCGGTGACGAAGAAATACATGATCCATCGTCTCAGCGGCATCTCG 9031 ||||| || ||||| || | || || || |||| | ||| ||| || | | || Sbjct 4099 GTGGTAGCAATGTGTTCTGCCACAAAAAAGAACATCACCCAGCGTTGGAGAGTTGTTTCA 4158 Query 9032 CTGACATCGCCCAGCGCTTCCAAGCGCTCCATGGCCTCGTAGAAGTCCACGGCAAAGTTA 9091 | | || || ||||| ||||| |||| || |||| || || | || ||||||||| Sbjct 4159 TTAATGTCACCTAGCGCCTCCAAACGCTGAATAACCTCATAAAAATTTACAGCAAAGTTA 4218 Query 9092 AAAAACTGGGAGTTACGCGCGGACACGGTCAACTCCTCTTC 9132 |||||||| ||| | || ||||| || | ||| ||||| Sbjct 4219 AAAAACTGCTGGTTTCTAGCAGACACAGTGAGCTCTTCTTC 4259 >seq1393656 Length=1543 Score = 100 bits (110), Expect = 6e-17 Identities = 335/521 (64%), Gaps = 14/521 (3%) Strand=Plus/Plus Query 8619 TGAACCTGAAAGAGAGTTCAACAGAATCAATCTCGGTATCGTTGACGGCGGCTTGCCTAA 8678 ||||||||||||| | ||| | ||| ||||| || | || || || || ||||| | | Sbjct 54 TGAACCTGAAAGATATTTCCATAGAGTCAATGTCTGCGTCATTAACTGCCACTTGCTTTA 113 Query 8679 GGATTTCTTGCACGTCGCCAGAGTTGTCCTGGTAGGCGATCTCGGCCATGAACTGCTCGA 8738 || || |||||| || ||| || || || || || || ||||| |||||||| | Sbjct 114 AAATCTCACTCACGTCTCCGCTGTTATCGTGATAAGCTATTTCTGCCATAAACTGCTCAA 173 Query 8739 TCTCTTCCTCTTGAAGATCTCCGCGGCCCGCTCTCTCGACGGTGGCCGCGAGGTCGTTGG 8798 ||||||||| | | ||||| | || |||||||| || ||||| || | ||| || Sbjct 174 TCTCTTCCTGCTCTAACTCTCCTCTCCCTGCTCTCTCAACTGTGGCAGCCAAGTCAATGC 233 Query 8799 AGATGCGCCCAATGAGTTGAGAGAATGCATTCATGCCCGCCTCGTTCCAGACGCGGCTGT 8858 ||||| |||| | | || || | || || ||||| || | ||||| Sbjct 234 TAATGCGAGACATGATGTTACTAAAAGCCTGTTCCCCATTTTCATTCCACACTCTGCTGT 293 Query 8859 AGACCACAGCCCCCACGGGATCTCTCGCGCGCATGACCACCTGGGCGAGGTTGAGCTCCA 8918 | || | || | | ||| || | ||| || ||||| || || || ||| || Sbjct 294 ACACAATTTGTCCATCTTCGTTTCTGGCTCTCATTACTACCTGCGCCAGATTAAGCATCA 353 Query 8919 CGTGGC-------GGGTGAAGACCGCATAGTTGCATAGGCGCTGGAAAAGGTAGTTGAGT 8971 | | | || ||||| | || | | || | | || |||||| ||| Sbjct 354 CATATCTCCCAAAAGGGGAAGATACCCTAAT----TTGGTGATTTAA---GTAGTTTAGT 406 Query 8972 GTGGTGGCGATGTGCTCGGTGACGAAGAAATACATGATCCATCGTCTCAGCGGCATCTCG 9031 ||||| || ||||| || | || || || |||| | ||| ||| || | | || Sbjct 407 GTGGTAGCAATGTGTTCTGCCACAAAAAAGAACATCACCCAGCGTTGGAGAGTTGTTTCA 466 Query 9032 CTGACATCGCCCAGCGCTTCCAAGCGCTCCATGGCCTCGTAGAAGTCCACGGCAAAGTTA 9091 | | || || ||||| ||||| |||| || |||| || || | || ||||||||| Sbjct 467 TTAATGTCACCTAGCGCCTCCAAACGCTGAATAACCTCATAAAAATTTACAGCAAAGTTA 526 Query 9092 AAAAACTGGGAGTTACGCGCGGACACGGTCAACTCCTCTTC 9132 |||||||| ||| | || ||||| || | ||| ||||| Sbjct 527 AAAAACTGCTGGTTTCTAGCAGACACAGTGAGCTCTTCTTC 567 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 99219745324950