Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Picea_20abies_20[ConGenIE_20PRJEB1822-1.0_202015-05-12] 10,253,695 sequences; 12,301,475,675 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq20237 98.7 9e-16 seq109075 93.3 4e-14 seq20028 93.3 4e-14 seq360634 89.7 4e-13 seq340010 87.8 2e-12 seq68131 87.8 2e-12 seq59979 86.0 5e-12 seq497574 84.2 2e-11 seq62192 84.2 2e-11 seq4575705 82.4 7e-11 seq3250489 82.4 7e-11 seq664089 82.4 7e-11 seq178778 82.4 7e-11 >seq20237 Length=39773 Score = 98.7 bits (108), Expect = 9e-16 Identities = 160/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || || | |||||| | ||| | || | | | || |||||||| ||||||||||| | Sbjct 30266 CCACCCCTCAAACGGAGAACAAGGTGCAGGGTAGATTCCTTTTGTATGTTGTAGTCAGCC 30207 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | ||||| |||||| || || || || | |||| |||||||| ||||| || || Sbjct 30206 AGGGTACGGCCGTCCTCAAGCTGCTTTCCTGCGAAGATCAGACGCTGCTGGTCGGGGGGA 30147 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTA-ATTGTTCCACGGTGTCGGTCGACTCCAC 138566 || ||||| ||||| ||| || ||| | |||| || | |||||| | ||| || Sbjct 30146 ATCCCTTCCTTGTCCTGGATCTTAGCTTTGACATTG-TCAATGGTGTCAGAGCTCTCGAC 30088 Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 ||||| || | || || || || || || || ||||| |||||||| Sbjct 30087 CTCGAGAGTGATGGTCTTGCCGGTGAGGGTCTTGACAAAGATCTGCAT 30040 >seq109075 Length=16623 Score = 93.3 bits (102), Expect = 4e-14 Identities = 139/195 (71%), Gaps = 2/195 (1%) Strand=Plus/Minus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 || |||||||| || ||||| ||| | || || || || || || || |||| | Sbjct 10613 GATTCCTTTTGGATATTGTAATCGGCAAGGGTTCGGCCATCTTCAAGCTGCTTTCCGGCA 10554 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTA-A 138539 |||| | |||||| || ||||| || || || || ||||| ||| || |||| | Sbjct 10553 AAGATCAAACGCTGCTGATCCGGGGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTTACA 10494 Query 138540 TTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTT 138599 |||| | | |||||| | ||| ||||||| || | ||| |||||||| ||||| || Sbjct 10493 TTGT-CAATGGTGTCAGAGCTCTCAACCTCGAGAGTGATCGTCTTACCAGTGAGAGTCTT 10435 Query 138600 TACAAAAATCTGCAT 138614 |||||||||||||| Sbjct 10434 GACAAAAATCTGCAT 10420 >seq20028 Length=39891 Score = 93.3 bits (102), Expect = 4e-14 Identities = 160/229 (70%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || || | |||||| | ||| | || | | | || |||||||| ||||||||||| | Sbjct 30726 CCTCCCCTCAAACGGAGAACCAGGTGGAGGGTAGATTCCTTTTGGATGTTGTAGTCCGCC 30785 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | || || |||||||| || ||||||| | |||| || | ||| ||||| || || Sbjct 30786 AGGGTTCGGCCATCCTCGAGCTGCTTACCGGCAAAGATAAGCCTCTGCTGGTCTGGGGGA 30845 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTG--TTTTAATTGTTCCACGGTGTCGGTCGACTCCA 138565 || ||||| || || ||| | || | || |||| || | |||||| | ||| | Sbjct 30846 ATCCCTTCCTTATC-CTGAATCTTGGCCTTGACATTG-TCGATGGTGTCAGAGCTCTCGA 30903 Query 138566 CCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 | |||| || | || || ||||| || ||||| ||||| |||||||| Sbjct 30904 CTTCGAGAGTGATTGTCTTGCCAGTGAGGGTTTTAACAAAGATCTGCAT 30952 >seq360634 Length=6173 Score = 89.7 bits (98), Expect = 4e-13 Identities = 157/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 138387 GCCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCT 138446 ||| |||| |||||| | || | ||| | | | || ||||| ||||| |||||||| Sbjct 5826 GCCACCTCTCAAACGGAGGACAAGATGCAGGGTCGATTCCTTCTGAATATTGTAGTCAGC 5767 Query 138447 CATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGG 138506 | || || || ||||| || || || | | |||| ||||| || || || || || Sbjct 5766 AAGGGTTCGGCCATCTTCGAGCTGCTTTCCCGCAAAGATCAGACGTTGCTGATCAGGGGG 5707 Query 138507 TATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCAC 138566 ||| ||||||||||| ||| || || | | || | |||||| | ||| || Sbjct 5706 TATGCCTTCTTTGTCTTGGATCTTGGCCTTCACGTTGTCGATGGTGTCCGAGCTCTCAAC 5647 Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCATG 138615 || | || | ||| |||||||| || ||||| || || ||||||||| Sbjct 5646 TTCCAAAGTAATCGTCTTACCAGTGAGGGTTTTAACGAAGATCTGCATG 5598 >seq340010 Length=6563 Score = 87.8 bits (96), Expect = 2e-12 Identities = 138/195 (71%), Gaps = 2/195 (1%) Strand=Plus/Minus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 || |||||||| |||||||||||| | ||| || |||||| | || || || | Sbjct 579 GATTCCTTTTGGATGTTGTAGTCGGCGAGAGTGCGTCCGTCCTCCAACTGCTTGCCAGCG 520 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTA-A 138539 |||| ||||| || ||||| ||||| ||||| |||||||| ||| || || | | Sbjct 519 AAGATGAGACGTTGCTGGTCGGGAGGGATACCCTCTTTGTCCTGGATCTTGGCCTTCACA 460 Query 138540 TTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTT 138599 ||| || | ||| || | ||||||||| | || | || || ||||||| || || Sbjct 459 TTG-TCAATGGTATCAGAGCTCTCCACCTCAAGGGTGATGGTCTTTCCAGTCAATGTCTT 401 Query 138600 TACAAAAATCTGCAT 138614 ||||| |||||||| Sbjct 400 CACAAATATCTGCAT 386 >seq68131 Length=22879 Score = 87.8 bits (96), Expect = 2e-12 Identities = 156/225 (69%), Gaps = 2/225 (1%) Strand=Plus/Plus Query 138391 CCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTCATA 138450 |||| |||||| | ||| | || | | | || |||||||| ||||||||||| | Sbjct 16680 CCTCTCAAACGGAGAACGAGGTGCAGGGTGGATTCCTTTTGGATGTTGTAGTCCGCAAGG 16739 Query 138451 GTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGTATA 138510 || || || || || || || |||| | |||| |||||||| ||||| || || || Sbjct 16740 GTTCGACCATCTTCCAGCTGCTTTCCGGCAAAGATCAGACGCTGCTGGTCAGGGGGAATC 16799 Query 138511 CCTTCTTTGTCGGTGATTTTTTGTTTTA-ATTGTTCCACGGTGTCGGTCGACTCCACCTC 138569 ||||| ||||| ||| || || | |||| || | |||||| | || ||||| Sbjct 16800 CCTTCCTTGTCCTGGATCTTGGCCTTGACATTG-TCAATGGTGTCCGAACTGTCGACCTC 16858 Query 138570 GACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 || || | || || |||| |||||||| ||||| || ||||| Sbjct 16859 GAGAGTGATGGTCTTGCCAGAGAGAGTTTTGACAAATATTTGCAT 16903 >seq59979 Length=24830 Score = 86.0 bits (94), Expect = 5e-12 Identities = 158/229 (69%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || || | || ||| | ||| | ||||| | |||||||| || || || ||||| Sbjct 7658 CCACCCCTCAGACGTAGAACGAGATGTAGAGTGGACTCCTTCTGGATATTATAGTCAGCA 7717 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | ||| || || || || || || || | | | ||||||||||| ||||| ||||| Sbjct 7718 AGAGTTCGGCCATCTTCAAGCTGCTTTCCAGCAAAAATTAGACGCTGCTGGTCAGGAGGA 7777 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTA-ATTGTTCCACGGTGTCGGTCGACTCCAC 138566 || ||||| ||||| ||| || || | |||| || | ||||||| ||| || Sbjct 7778 ATGCCTTCCTTGTCCTGGATCTTGGCCTTGACATTG-TCGATAGTGTCGGAGCTCTCAAC 7836 Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCATG 138615 || | || | ||| ||||| || || ||||| ||||| ||||||||| Sbjct 7837 TTCCAAAGTAATCGTCTTACCGGTGAGGGTTTTGACAAAGATCTGCATG 7885 >seq497574 Length=4355 Score = 84.2 bits (92), Expect = 2e-11 Identities = 137/195 (70%), Gaps = 2/195 (1%) Strand=Plus/Minus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 || ||||| || |||||||||||| | |||||| ||||| | || ||||||| | Sbjct 1853 GATTCCTTCTGGATGTTGTAGTCGGCGAGAGTACGTCCATCCTCCAACTGCTTACCGGCA 1794 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTA-A 138539 |||| ||||| || ||||| || || || || |||||||| |||||| || | | Sbjct 1793 AAGATGAGACGTTGCTGGTCTGGTGGAATTCCCTCTTTGTCCTGGATTTTCGCCTTCACA 1734 Query 138540 TTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTT 138599 ||| || | ||| || | ||| ||||| | || | || ||||| |||| || || Sbjct 1733 TTG-TCAATGGTATCAGAGCTCTCAACCTCAAGAGTTATAGTCTTACCGGTCAAGGTCTT 1675 Query 138600 TACAAAAATCTGCAT 138614 || || |||||||| Sbjct 1674 CACGAATATCTGCAT 1660 >seq62192 Length=24286 Score = 84.2 bits (92), Expect = 2e-11 Identities = 134/190 (71%), Gaps = 2/190 (1%) Strand=Plus/Plus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 || |||||||| |||||||||||| | ||| || |||||| | || || || | | Sbjct 20137 GATTCCTTTTGGATGTTGTAGTCGGCGAGAGTGCGTCCGTCCTCCAACTGCTTGCCAGCA 20196 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTA-A 138539 |||| |||||||| || || ||||| ||||| || ||||| ||| || || | | Sbjct 20197 AAGATGAGACGCTGCTGATCGGGAGGGATACCCTCCTTGTCCTGGATCTTCGCCTTCACA 20256 Query 138540 TTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTT 138599 ||| || | ||| || | ||||||||| | || | || || ||||||| || || Sbjct 20257 TTG-TCAATGGTATCAGAGTTCTCCACCTCAAGGGTGATTGTCTTTCCAGTCAATGTCTT 20315 Query 138600 TACAAAAATC 138609 |||||| ||| Sbjct 20316 TACAAATATC 20325 >seq4575705 Length=350 Score = 82.4 bits (90), Expect = 7e-11 Identities = 114/157 (73%), Gaps = 2/157 (1%) Strand=Plus/Plus Query 138460 TCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTG 138519 || || || ||||| || | | | ||||||||||| ||||| ||||| || ||||| ||| Sbjct 28 TCTTCAAGCTGTTTTCCAGCAAATATTAGACGCTGCTGGTCAGGAGGAATGCCTTCCTTG 87 Query 138520 TCGGTGATTTTTTGTTTTA-ATTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAG 138578 || ||| || || | |||| || | ||| |||| ||| || || | || | Sbjct 88 TCCTGGATCTTGGCCTTCACATTG-TCGATGGTATCGGAGCTCTCAACTTCCAAGGTAAT 146 Query 138579 CGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCATG 138615 ||| ||||| || || ||||| ||||||||||||||| Sbjct 147 CGTCTTACCGGTGAGGGTTTTAACAAAAATCTGCATG 183 >seq3250489 Length=488 Score = 82.4 bits (90), Expect = 7e-11 Identities = 157/229 (69%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || || | || ||| | ||| | ||||| | |||||||| || || || ||||| Sbjct 94 CCACCCCTCAGACGTAGAACGAGATGTAGAGTGGACTCCTTCTGGATATTATAGTCAGCA 153 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | ||| || || || || || || || | | | ||||||||||| ||||| ||||| Sbjct 154 AGAGTTCGGCCATCTTCAAGCTGCTTTCCAGCAAAAATTAGACGCTGCTGGTCAGGAGGA 213 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTA-ATTGTTCCACGGTGTCGGTCGACTCCAC 138566 || ||||| ||||| ||| || || | |||| || | ||||||| ||| || Sbjct 214 ATGCCTTCCTTGTCCTGGATCTTGGCCTTCACATTG-TCGATAGTGTCGGAGCTCTCAAC 272 Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCATG 138615 || | || | || ||||| || || ||||| ||||| ||||||||| Sbjct 273 TTCCAAAGTAATGGTCTTACCGGTGAGGGTTTTCACAAAGATCTGCATG 321 >seq664089 Length=3230 Score = 82.4 bits (90), Expect = 7e-11 Identities = 158/229 (69%), Gaps = 3/229 (1%) Strand=Plus/Minus Query 138387 GCCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCT 138446 ||| |||| |||||| | || | || | | | || |||||||| || ||||| ||| Sbjct 697 GCCACCTCCCAAACGGAGGACAAGGTGCAGGGTGGATTCCTTTTGGATATTGTAATCGGC 638 Query 138447 CATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGG 138506 | || || || | |||||| || || | | |||| | ||| ||||||||||| || Sbjct 637 AAGGGTTCGGCCATCTTTGAGTTGCTTTCCAGTAAAGATCAAACGTTGTTGGTCCGG-GG 579 Query 138507 TATACCTTCTTTGTCGGTGATTTTTTGTTTTA-ATTGTTCCACGGTGTCGGTCGACTCCA 138565 || |||| ||||| |||||||| |||| |||| || | ||| | | ||| | Sbjct 578 GATGCCTTTCTTGTCCTGGATTTTTTCCTTTACATTG-TCAATGGTATTAGAGCTCTCAA 520 Query 138566 CCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 |||||| || | || || ||||| || || || ||||| || ||||| Sbjct 519 CCTCGAGAGTGATTGTCTTGCCAGTGAGGGTATTCACAAAGATATGCAT 471 >seq178778 Length=11296 Score = 82.4 bits (90), Expect = 7e-11 Identities = 158/229 (69%), Gaps = 3/229 (1%) Strand=Plus/Plus Query 138387 GCCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCT 138446 ||| |||| |||||| | || | || | | | || |||||||| || ||||| ||| Sbjct 3025 GCCACCTCCCAAACGGAGGACAAGGTGCAGGGTGGATTCCTTTTGGATATTGTAATCGGC 3084 Query 138447 CATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGG 138506 | || || || | |||||| || || | | |||| | ||| ||||||||||| || Sbjct 3085 AAGGGTTCGGCCATCTTTGAGTTGCTTTCCAGTAAAGATCAAACGTTGTTGGTCCGG-GG 3143 Query 138507 TATACCTTCTTTGTCGGTGATTTTTTGTTTTA-ATTGTTCCACGGTGTCGGTCGACTCCA 138565 || |||| ||||| |||||||| |||| |||| || | ||| | | ||| | Sbjct 3144 GATGCCTTTCTTGTCCTGGATTTTTTCCTTTACATTG-TCAATGGTATTAGAGCTCTCAA 3202 Query 138566 CCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 |||||| || | || || ||||| || || || ||||| || ||||| Sbjct 3203 CCTCGAGAGTGATTGTCTTGCCAGTGAGGGTATTCACAAAGATATGCAT 3251 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 434248822514285