Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Picea_20abies_20[ConGenIE_20PRJEB1822-1.0_202015-05-12] 10,253,695 sequences; 12,301,475,675 total letters Query= NC_012959.1 Length=34920 Score E Sequences producing significant alignments: (Bits) Value seq416950 441 1e-119 seq1393656 150 4e-32 >seq416950 Length=5269 Score = 441 bits (488), Expect = 1e-119 Identities = 1581/2438 (65%), Gaps = 78/2438 (3%) Strand=Plus/Plus Query 4986 TCCCAGAGCTCGGTGACGTGCTCTACGGCATCTGGATCCAGCAGACTTCCTCGTTTCGGG 5045 ||||| || || | || || || |||||| ||||| || || || | ||||| | Sbjct 340 TCCCACAGTTCTTTTACATGTTCCACGGCAGTGTCATCCAACATACATCGTTGTTTCTTG 399 Query 5046 GGTTGGGACGACTG-CGACTGTAGGGCACAAGACGATGGGCGTCCAGCGCGGCCAGCGTC 5104 |||| || | | ||| ||| |||| || || ||| |||| | | | || ||| Sbjct 400 GGTTTGGTTGCTTTTCGA--GTAAGGCATCAGGCGGTGGCCGTCTATGTCTACAAGGGTC 457 Query 5105 ATGTCCTTCCAGGGTCTCAGGGTCCGCGTGAGGGTGGTCTCCGTTACGGTGAATGGGTGG 5164 |||| ||||| || |||| || ||||| | || || || || || ||||| ||| Sbjct 458 TTGTCTTTCCAAGGCCTCACTGTGCGCGTTAAAGTTGTTTCGGTGACTGTGAACGGG--- 514 Query 5165 GCCCCGG-GCTG-GGCGCTT-GCAAGTGTGCGCTTCAGACTCATCCTGCTGGTGCTGAAA 5221 ||| || ||| || | | || || || || || | ||||| | ||||||| ||||| Sbjct 515 GCCGCGTTGCTTTGGTTCGTAGCGAGGGTCCGTTTTAAACTCAGGCGGCTGGTG-TGAAA 573 Query 5222 CGGGCACGGTCTTCGCC-CTGCGCGTCGG-CAAGATAGCAGTTAACCA-----TGAGCTG 5274 || | | || | | ||||||||| | |||| ||||| ||| ||| | | Sbjct 574 ---GCGCTGGCTCCCCTGCTGCGCGTCAGACAAG-TAGCATTTAGCCAAAGTGTCATAAC 629 Query 5275 GTAGTTCAGGGCCTTGGCGGCATGGCCCTTGGCGCGGAGCTTGCCCTTGGAAAAGCGCCC 5334 || ||||| | | ||||| ||||| || || || || || || | |||| Sbjct 630 ATAATTCAG-----TAGTTGCATGACCCTTCGCCCGCAGTTTACCTTTACCCACATGCCC 684 Query 5335 GCAGGCGGGACAGAGGAGGGATTGCAGGGCGTACAGTTTGGGCGCGAGAAAGACCGACTC 5394 ||| | ||| | | || | || |||||||| || ||||||||||| || || Sbjct 685 ACAGCAAGTACAAACAGTGTTTTTTAAAGCATACAGTTTAGGAGCGAGAAAGACAGATTC 744 Query 5395 GGGGGCAAAGGCGTCCGCTCCGCAGTGGGCGCAGACGGTCTCGCACTCGACAAGCCAGGT 5454 | ||| || || | || | | || ||||| || || || | ||| || Sbjct 745 AGAACTAAAAGCATCAGACTTACATTTTTCACACTGAGTCTCACATTCAACCAACCATGT 804 Query 5455 GAGCTCGGGCTGCTTGGGGTCAAAAACCAGTTTTCCCCCGTTCTTTTTGATGCGCTTCTT 5514 | || | || || |||||||| || || || || || || || ||||| | || Sbjct 805 AATAGATGGGTTTTTTGGATCAAAAACTAGCTTCCCTCCATTTTTCTTAATGCGGTGTTT 864 Query 5515 ACCTCGCGTCTCCATAAGTCTGTGTCCGCGCTCGGTGACAAACAGGCTGTCGGTGTCCCC 5574 ||||| |||||| || | ||| || ||||| ||||||| |||||| |||||||| Sbjct 865 ACCTCTTTGCTCCATGAGCCGGTGCCCCTCTTCGGTCACAAACAAGCTGTCAGTGTCCCC 924 Query 5575 GTAGACGGACTTGATTGGCCTGTCCTGCAGGGGCGTCCCGCGGTCCTCCTCGTAAAGAAA 5634 |||||| || || || | | | || || ||| | || | ||| || |||| | ||| Sbjct 925 GTAGACAGATTTTATAGTTTTTTGATGTAGTGGCTTTCCTCTGTCTTCGGCGTATAAAAA 984 Query 5635 CTCGGACCACTCTGAGACGAAGGCGCGCGTCCACGCCAAGACAAAGGAGGCCACGTGCGA 5694 || | |||||| || || || | | ||||| ||||| ||||| || || | ||| || Sbjct 985 TTCTGCCCACTCAGACACAAATACTCTAGTCCAGGCCAAAACAAACGAAGCAATGTGGGA 1044 Query 5695 GGGGTAGCGGTCGTTTTCCACCAGGGGGTCCACCTTTTCCACCGTGTGCAGACACATGTC 5754 | ||| | || |||||| | | || ||||| | ||||| | || ||||| Sbjct 1045 AGCGTACCTGTTGTTTTCTATTAAAGGAGAGTTGTTTTCTAAAGTGTGTAAGCATATGTC 1104 Query 5755 CCCCTCCTCCGCATCCAAGAAGGTGATTGGCTTGTAGGTGTAGGCCACGTGACCGGGGGT 5814 | || || | || || || ||||||||||| || | || | |||||||| | Sbjct 1105 ATCATCTTCAGTTTCTAAAAACGTGATTGGCTTATACTTATATGTCACGTGACTATCTTT 1164 Query 5815 CCCCGACgggggggTATAAAAGGGGGCGGGTCTGTGCTCGTCCTCACTCTCTTCCGCGTC 5874 |||||||||| ||| | ||| | | || ||||| || || | Sbjct 1165 -----------GGGTATAAAAAGGGTGTGCTCTTCGTTT-TCATCACTTTCATC----TA 1208 Query 5875 GCTGTCCACGAGCGCCAGCTGTTGG-GGTAGGTATTCCCTCTCAAGAGCGGGCATAACCT 5933 || || ||| | || ||| |||| | ||| | ||||||| | Sbjct 1209 ACT---------CGGCAGAAGGTGCAGGTGGGTAAGCTACGACAAATTCTGGCATAATTT 1259 Query 5934 CGGCACTCAGGTTGTCAGTTTCTAGAAACGAGGAGGATTTGATGTTGGCCTGCCCTGCCG 5993 | ||||| | |||||||||||||| || || || ||||||||| | ||| | Sbjct 1260 CAGCACTAAAGTTGTCAGTTTCTATGAATGATGAAGATTTGATGGAAAAGTTACCTCTGG 1319 Query 5994 CAATGCTTTTT-AGGAGACTTTCATCCATTTGGTCAGAAAAGACTAtttttttATTGTCA 6052 | ||| ||||| | | | || | || | |||||| ||||| || |||||||| ||||| Sbjct 1320 CGATGGTTTTTGACGCG-CTGGCTTCTAGTTGGTCTGAAAACACAATTTTTTTGTTGTCC 1378 Query 6053 AGCTTGGTGGCAAAGGAGCCATAGAGGGCGTTGGAGAGAAGCTTGGCGATGGATCTCATG 6112 | || ||||||||| |||||| | ||||||||| || ||||| || ||| || |||| Sbjct 1379 AATTTAGTGGCAAAGCTGCCATATAAGGCGTTGGAAAGTAGCTTAGCTATGCTTCGCATG 1438 Query 6113 GTCTGATTTTTGTCACGGTCGGCGCGCTCCTTGGCCGCAATGTTGAGCTGGACATATTCG 6172 || || || || || ||| || || ||||| | ||||| ||||| || ||||| Sbjct 1439 GTTTGGTTCTTTTCTTTGTCTGCTTTTTCTTTGGCTCCGATGTTTAGCTGCACGTATTCT 1498 Query 6173 CGCGCAACGCACTTCCATTCGGGAAAAACAGTGGTGCGCTCGTCGGGCACAATCCTGACG 6232 || ||||||||||| || || || | || || | ||||| || | ||| | || Sbjct 1499 TTGGCCACGCACTTCCACTCTGGGAAGATGGTTGTTCTTTCGTCTGGAAGAATGCGCACT 1558 Query 6233 CGCCAGCCTCGGTTATGCAGGGTGACCAGGTCCACGCTGGTGGCCACCTCGCCGCGCAGG 6292 ||| |||| ||| |||| || | || ||| | || || || || || |||| Sbjct 1559 GCCCATCCTCTGTTGTGCAAAGTAATCAAGTCTATAGAAGTAGCTACTTCTCCTCGCAAA 1618 Query 6293 GGCTCGTTAGTCCAGCAGAGGCGCCCGCCCTTGCGCGAGCAAAAAGGTGGTAACACATCA 6352 ||||||||||||||||| || | ||||| || | |||||||| || || | ||||| Sbjct 1619 GGCTCGTTAGTCCAGCACAGCCTTCCGCCTTTTCTGGAGCAAAACGGAGGCAGTTCATCA 1678 Query 6353 AGCAAATGCTCGTCAGGGGGGTCCGCATCGATGGTAAAGATGCCCGGACAGAGTTCCTTG 6412 || || |||||| || || ||||| |||||||| || ||||| ||| || || | Sbjct 1679 AGAAACAACTCGTCTGGAGGATCCGCGTCGATGGTGAAAATGCCTGGAAGAAGACACTCG 1738 Query 6413 TCAAAATAATCAATTTTTAAGGATGC----ATCATCCAAGGCCATTTG--CCAGTTGCGG 6466 |||||||| ||||||||| ||| | | ||| || | || ||| | Sbjct 1739 TCAAAATAGTCAATTTTT-----TGCTCTAAGTTTTCAA-GCTTTCTGATCCATTCTGTC 1792 Query 6467 GCGGCCAGGGCTCGCTCGCAGGGGTTCAGGGGCGGACCCCAGGGCATGGGATGCGTAAGC 6526 || || | ||||| || | || || | ||| | || | ||| | |||||||| || Sbjct 1793 GCAGCTAAGGCTCTTTCATACGGATTTAAAGGCTGCCCGCTGGGAAAAGGATGCGTTAGA 1852 Query 6527 GCGGAGGCGTACATGCCGCAGATGTCATACACATAGATGGGCTCCGAGAGGATGCCGATG 6586 || ||| |||||||||||||||||||||||||| || |||| | |||||| || Sbjct 1853 GCACTGGCATACATGCCGCAGATGTCATACACATAAATTGGCTGTTCCATGATGCCAATA 1912 Query 6587 TAGGTGGGATAACAGCGCCCCCCGCGGATGCTGGCGCGCACGTAGTCATACAACTCATGC 6646 || |||||||| ||||| || || |||||||| ||| ||||||||||||| ||||| Sbjct 1913 TAAGTGGGATAGCAGCGACCACCACGGATGCTCTGGCGGACGTAGTCATACATTTCATGA 1972 Query 6647 GAGGGTGCCAAGAAGGCG-GGGCCAAGATTGGTGCGCTGGGGCTGCTCGGCGCGAAAGAC 6705 || ||||| || || || | | ||| ||| | | || || | | | | | Sbjct 1973 GATGGTGCTAATAAAACGTTGTCTAAGTTTGCTTTATTTGGCCT-AACTTCTCTGTATAA 2031 Query 6706 GATCTGGCGAAAGATGGCATGCGAGTTGGAGGAAATAGTGGGCCGTTGGAAGATGTTAAA 6765 || || ||| || ||||| ||||| ||| ||||||||| | ||| || |||||||| Sbjct 2032 TATTTGCTTAAAAATTGCATGAGAGTTAGAGCTAATAGTGGGTCTTTGAAAAATGTTAAA 2091 Query 6766 GTGGGCGTGGGGCAGGCGGAC-CGAGTCGCGGATAAAGTGCGCGTAGGAGTCTTGCAGCT 6824 || | || | | || ||| || ||||||| ||| || ||||| || | Sbjct 2092 TGAAGCATCAGGTAAGTTCACTTGAGAAGC-AATAAAGTTTTTGTAAGATTCTTGGAGTT 2150 Query 6825 TGGCGACCAGCTCGGCAGTGACAAGGACGTCCATGGCGCAGTAGTCCAGTGTTTCGCGGA 6884 || || || | | || || | ||||| | || |||| ||| |||| ||| Sbjct 2151 TGTTTACTAGGGCCGATGTCACTAACACGTCTTGCACACAATAGTGCAGCGTTTGCTGGA 2210 Query 6885 TAATGTCATAACCCGCCTCTCCTTTTTTCT-TCCACAGCTCGCGGTTAAGGGCGTACTCC 6943 | ||||| ||| || || | |||||||| ||||||| | ||| || ||||| Sbjct 2211 TTATGTCGTAAGCCCCCAC-GTTTTTTTCTCTCCACAGAGCCTTGTTGAGTTGATACTCT 2269 Query 6944 TCGTCATCCTTCCAGTACTCCCGGAGCGGGAATCCTCGATCGTCCGCACGGTAAGAGCCC 7003 ||| |||||||| || || || || || || ||||||| || Sbjct 2270 TCGCTGGATTTCCAGTATCTTAGGCTTGGAAAGCCATCCTCATCTTGTTGGTAAGACCCT 2329 Query 7004 AGCATGTAGAAATGGTTAACGGCCTTGTAGGGACAGCAGCCCTTCTCCACGGGGAGGGCG 7063 | | ||||| | || || || | ||| ||||||| || || || || || || || Sbjct 2330 ATTCTATAGAATTCATTTACTGCTTCGTACGGACAGCTTCCTTTTTCTACAGGCAGCTCG 2389 Query 7064 TAAGCTTGAGCGGCCTTGC-GGAGCGAGGTGTGCGTCAGGGCAAAGGTGTCCCTGACCAT 7122 ||||| ||| || || | ||| | ||||| ||||| ||||| ||||| || ||||| Sbjct 2390 TAAGCCCCAGCAGCATTTCTTAAGCTA-GTGTGGGTCAGCGCAAAAGTGTCTCTTACCAT 2448 Query 7123 GACTTTCAAAAACTGGTACTTAAAGTCCGAGTCGTCGCAGC-CGCCGTGCTCCCAGAGCT 7181 | ||| | |||||||||||| ||||| | | | ||| || |||||| Sbjct 2449 AAATTTAACAAACTGGTACTTGTGGTCCGCGGC-TGTGAGCTTTCCACACTCCCAATCGG 2507 Query 7182 CAAAATCGGTGCGCTTCTTTGAGAGGGGGTTAGGCAGAGC-GAAAGTGACGTCATTGAAG 7240 | ||||| | || || | | || ||||| | ||| |||| | ||||||||| Sbjct 2508 CGAAATCTTTTCGTTTTTCGTACTTTGGATTAGGTA-AGCAAAAAGAAATGTCATTGAAC 2566 Query 7241 AGAATCTTGCCTGCTCGTGGCATAAAATTGCGGGTGATGCGGAAAGGGCCCGGAACGCAG 7300 || || || || || |||||||||||| | | || ||||| | |||| Sbjct 2567 AGTATTTTACCGTTTCTTGGCATAAAATTTCTATTTATTTTGAAAGCAGGCAGAACATCC 2626 Query 7301 GCTCGGTTGTTGATAACCTGGGCGGCTAGGACAATCTCGTCAAAGCCGTTGATGTTGTGC 7360 | || ||||| || || || ||||| | || ||||| ||||| ||| ||||||||| Sbjct 2627 GTTCTGTTGTGTATGACTTGCGCGGCCAACACGATCTCATCAAAACCGCAGATGTTGTGG 2686 Query 7361 CCGACAATGTATAGTTCCATGAATCGCGGGCGGCCTTT 7398 || | | || | ||| || || | || | |||||| Sbjct 2687 CCAATTACATAAATTTCAATAAACTGTGGACTGCCTTT 2724 Score = 154 bits (170), Expect = 3e-33 Identities = 382/575 (66%), Gaps = 10/575 (2%) Strand=Plus/Plus Query 8469 GCGGTTGACATCCTGGATCTGCCGCCTCTGCGTGAAGACCACGGGCCCCGTGACTTTGAA 8528 |||||||| | ||| |||| |||| | || ||||| || || || ||| |||| Sbjct 3690 GCGGTTGATGTTCTGAATCTCCCGCAGGCCGGAAAATACCACTGGGCCGGTCACTCTGAA 3749 Query 8529 CCTGAAAGACAGTTCAACAGAATCAATCTCGGCGTCATTGACGGCGGCCTGCCGCAGGAT 8588 ||||||||| | ||| | ||| ||||| || |||||||| || || | ||| | || Sbjct 3750 CCTGAAAGATATTTCCATAGAGTCAATGTCTGCGTCATTAACTGCCACTTGCTTTAAAAT 3809 Query 8589 CTCTTGCACGTCGCCCGAGTTGTCCTGGTAGGCGATCTCGGACATGAACTGCTCGATCTC 8648 ||| |||||| || ||| || || || || || || | ||| |||||||| ||||| Sbjct 3810 CTCACTCACGTCTCCGCTGTTATCGTGATAAGCTATTTCTGCCATAAACTGCTCAATCTC 3869 Query 8649 CTCCTCCTGGAGATCGCCGCGGCCCGCGCGCTCGACGGTGGCGGCAAGGTCATTTGAGAT 8708 |||| || | || || | || || | ||| || ||||| || | |||| | || Sbjct 3870 TTCCTGCTCTAACTCTCCTCTCCCTGCTCTCTCAACTGTGGCAGCCAAGTCAATGCTAAT 3929 Query 8709 GCGACCCAT-AAGCTGCGAAAAGGC--ACCCAGGCCGCTCTCGTTCCAAACGCGGCTGTA 8765 |||| ||| | | | | ||||| | || || | || ||||| || | |||||| Sbjct 3930 GCGAGACATGATGTTACTAAAAGCCTGTTCC---CCATTTTCATTCCACACTCTGCTGTA 3986 Query 8766 AACCACGTCCCCGTCAACGTCGCGCGCGCGCATGACCACCTGCGCAAGGTTCAGCTCCAC 8825 || | | || || ||| | || | ||| || |||||||| || || ||| ||| Sbjct 3987 CACAATTTGTCCATCTTCGTTTCTGGCTCTCATTACTACCTGCGCCAGATTAAGCATCAC 4046 Query 8826 GTGCCGCGTAAAGACGGCGTAGTTGCGC--AGGCGCTGAAAAAGGTAGTTAAGGGTGGTG 8883 | | | || | || | || | | | | | ||| | |||||| || ||||| Sbjct 4047 ATATCTCCCAA--AAGGGGAAGATACCCTAATTTGGTGATTTAAGTAGTTTAGTGTGGTA 4104 Query 8884 GCGATGTGCTCGGTGACAAAGAAGTACATGATCCAGCGGCGCAGGGGCATTTCGCTGATG 8943 || ||||| || | ||||| ||| |||| | |||||| | || | |||| | ||| Sbjct 4105 GCAATGTGTTCTGCCACAAAAAAGAACATCACCCAGCGTTGGAGAGTTGTTTCATTAATG 4164 Query 8944 TCGCCAATGGCCTCCAGCCTTTCCATGGCCTCGTAAAAGTCCACGGCAAAGTTAAAAAAC 9003 || || | ||||||| | | || |||| ||||| | || ||||||||||||||| Sbjct 4165 TCACCTAGCGCCTCCAAACGCTGAATAACCTCATAAAAATTTACAGCAAAGTTAAAAAAC 4224 Query 9004 TGGGCGTTGCGGGCCGATACCGTGAGCTCGTCTTC 9038 || ||| | || || || |||||||| ||||| Sbjct 4225 TGCTGGTTTCTAGCAGACACAGTGAGCTCTTCTTC 4259 >seq1393656 Length=1543 Score = 150 bits (166), Expect = 4e-32 Identities = 361/541 (67%), Gaps = 10/541 (2%) Strand=Plus/Plus Query 8503 AAGACCACGGGCCCCGTGACTTTGAACCTGAAAGACAGTTCAACAGAATCAATCTCGGCG 8562 || ||||| || || || ||| ||||||||||||| | ||| | ||| ||||| || ||| Sbjct 32 AATACCACTGGGCCGGTCACTCTGAACCTGAAAGATATTTCCATAGAGTCAATGTCTGCG 91 Query 8563 TCATTGACGGCGGCCTGCCGCAGGATCTCTTGCACGTCGCCCGAGTTGTCCTGGTAGGCG 8622 ||||| || || | ||| | ||||| |||||| || ||| || || || || Sbjct 92 TCATTAACTGCCACTTGCTTTAAAATCTCACTCACGTCTCCGCTGTTATCGTGATAAGCT 151 Query 8623 ATCTCGGACATGAACTGCTCGATCTCCTCCTCCTGGAGATCGCCGCGGCCCGCGCGCTCG 8682 || || | ||| |||||||| ||||| |||| || | || || | || || | ||| Sbjct 152 ATTTCTGCCATAAACTGCTCAATCTCTTCCTGCTCTAACTCTCCTCTCCCTGCTCTCTCA 211 Query 8683 ACGGTGGCGGCAAGGTCATTTGAGATGCGACCCAT-AAGCTGCGAAAAGGC--ACCCAGG 8739 || ||||| || | |||| | |||||| ||| | | | | ||||| | || Sbjct 212 ACTGTGGCAGCCAAGTCAATGCTAATGCGAGACATGATGTTACTAAAAGCCTGTTCC--- 268 Query 8740 CCGCTCTCGTTCCAAACGCGGCTGTAAACCACGTCCCCGTCAACGTCGCGCGCGCGCATG 8799 || | || ||||| || | |||||| || | | || || ||| | || | ||| Sbjct 269 CCATTTTCATTCCACACTCTGCTGTACACAATTTGTCCATCTTCGTTTCTGGCTCTCATT 328 Query 8800 ACCACCTGCGCAAGGTTCAGCTCCACGTGCCGCGTAAAGACGGCGTAGTTGCGC--AGGC 8857 || |||||||| || || ||| ||| | | | || | || | || | | | | Sbjct 329 ACTACCTGCGCCAGATTAAGCATCACATATCTCCCAA--AAGGGGAAGATACCCTAATTT 386 Query 8858 GCTGAAAAAGGTAGTTAAGGGTGGTGGCGATGTGCTCGGTGACAAAGAAGTACATGATCC 8917 | ||| | |||||| || ||||| || ||||| || | ||||| ||| |||| | || Sbjct 387 GGTGATTTAAGTAGTTTAGTGTGGTAGCAATGTGTTCTGCCACAAAAAAGAACATCACCC 446 Query 8918 AGCGGCGCAGGGGCATTTCGCTGATGTCGCCAATGGCCTCCAGCCTTTCCATGGCCTCGT 8977 |||| | || | |||| | ||||| || | ||||||| | | || |||| | Sbjct 447 AGCGTTGGAGAGTTGTTTCATTAATGTCACCTAGCGCCTCCAAACGCTGAATAACCTCAT 506 Query 8978 AAAAGTCCACGGCAAAGTTAAAAAACTGGGCGTTGCGGGCCGATACCGTGAGCTCGTCTT 9037 |||| | || ||||||||||||||||| ||| | || || || |||||||| |||| Sbjct 507 AAAAATTTACAGCAAAGTTAAAAAACTGCTGGTTTCTAGCAGACACAGTGAGCTCTTCTT 566 Query 9038 C 9038 | Sbjct 567 C 567 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 98030963218380