Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Picea_20abies_20[ConGenIE_20PRJEB1822-1.0_202015-05-12] 10,253,695 sequences; 12,301,475,675 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq220612 138 1e-27 seq6585 89.7 6e-13 seq36261 87.8 2e-12 >seq220612 Length=9589 Score = 138 bits (152), Expect = 1e-27 Identities = 304/446 (68%), Gaps = 10/446 (2%) Strand=Plus/Minus Query 15887 ATCAAAGCGACCTGGGCGAAGGAGCGCGTCATCAAGGATATCAACGCGATTCGTTGCGGC 15946 |||||| || |||||||| | | || ||||||| |||||| | | || ||||| || Sbjct 3258 ATCAAAACGCCCTGGGCGCAACAAAGCAGCATCAAGTATATCAGCCCTGTTGGTTGCAGC 3199 Query 15947 GATGACAACAATACCTGT-TTCGTTATCAAAACCATCCATCTCTGTCAAAAGCTGGTTAA 16005 || |||| ||||| || ||| | |||||||||||||| ||||| | |||||| || | Sbjct 3198 AATCACAATGATACCAGTGTTCCCT-TCAAAACCATCCATTTCTGTAAGAAGCTGATTCA 3140 Query 16006 TAGTTTGTTCCCGTTCATCATTCGCT-GGCATACCACCAGCACTGCGTTGCTTTCCCACG 16064 |||||||| || |||||||| || | || |||| | | ||| | || || Sbjct 3139 GGGTTTGTTCTCGCTCATCATTTCCTCCACCTA-TTCCAGTTCCTCTCTGCCTACCAACT 3081 Query 16065 GCATCAATCTCATCAATGAAGACGATGCATGGTTGATTTTCGCGAGCGACTTCAAAGAGA 16124 |||||||| ||||| | ||| || ||||| || |||||| || || || || Sbjct 3080 GCATCAATTTCATCGACGAAAACAATGCAAGGGGCATTTTCTTTGGCCTTTTTGAACAGG 3021 Query 16125 TCCCGTACACGCTTG--GCGCCCACACCAACAAACATCTCCACAAAGTTTGCGGCGGAAC 16182 || || ||| || | || || | ||| ||||||||||| ||||| | | | | | Sbjct 3020 TCACG--CACTCTAGATGCTCCGATACCGACAAACATCTCAACAAACTCAGACCCTG-AG 2964 Query 16183 ATTG-GATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAGAGTCTTACCC 16241 || | || |||||| ||| || ||| || |||||||| ||| || | |||||| || Sbjct 2963 ATAGAGAAGAAGGGTACACCAGCTTCCCCTGCAATGGCCTTGGCTAGCAAAGTCTTCCCA 2904 Query 16242 GTACCTGGCTTACCCGCGAGGAGGGCACCTCGTGGAATCTTGGCGCCACTTCCAAAGTAT 16301 || ||||| |||| | || || | ||| ||||| || ||| || || | Sbjct 2903 GTCCCTGGTGGACCCACAAGAAGAACTCCTTTAGGAATACGAGCTCCAATTGCAGTAAAC 2844 Query 16302 CTCTCAGGTTGCTTAAGAAAATCCAC 16327 ||||| |||| ||| || || || || Sbjct 2843 CTCTCTGGTTTCTTCAGGAACTCAAC 2818 >seq6585 Length=56338 Score = 89.7 bits (98), Expect = 6e-13 Identities = 190/277 (69%), Gaps = 10/277 (4%) Strand=Plus/Plus Query 15897 CCTGGGCGAAGGAGCGCGTCATCAAGGATATCAACGCGATTCGTTGCGGCGATGACAACA 15956 || || ||||| | || |||| || | |||||| ||||| || || |||||||||| Sbjct 3592 CCAGGCCGAAGTAAAGCTGCATCCAGCACATCAACTCGATTGGTAGCTGCGATGACAATC 3651 Query 15957 ATACCTGT-TTCGTTATCAAAACCATCCATCTCTGTCAAAAGCTGGTTAATAGTTTGTTC 16015 | || || ||| | ||||| ||||||||||| || | | ||||| | || ||||| Sbjct 3652 ACTCCAGTGTTCCCT-TCAAATCCATCCATCTCAGTAAGCAATTGGTTCAATGTCTGTTC 3710 Query 16016 CCGTTCATCATTCGCTGGCATACCA---CCAGCACTGCGTTGCTTTCCCACGGCATCAAT 16072 ||||||||||| || |||| || | | | ||| ||||||| ||||| | Sbjct 3711 TCGTTCATCATTGCCT---CCACCAATTCCTGTTCCCCTCTGCCTTCCCACTGCATCGAG 3767 Query 16073 CTCATCAATGAAGACGATGCATGGTTGATTTTCGCGAG-CGACTTCAAAGAGATCCCGTA 16131 ||||| ||||| | || || ||| |||||| | | ||| ||| ||||| || | Sbjct 3768 TTCATCTATGAAAATAATACAAGGTGCATTTTCCTTTGCCCTCTTGAAA-AGATCACGAA 3826 Query 16132 CACGCTTGGCGCCCACACCAACAAACATCTCCACAAA 16168 | | ||| || || || ||||||||||| | ||| Sbjct 3827 CCCTAGAGGCTCCTACTCCTACAAACATCTCTATAAA 3863 >seq36261 Length=32380 Score = 87.8 bits (96), Expect = 2e-12 Identities = 278/424 (66%), Gaps = 8/424 (2%) Strand=Plus/Minus Query 175841 CCCGTACCGATACCCTCTGTACCGTTCACGAGAACCATGGGGAGTGTTGGCATGTAGAAG 175900 || ||||| ||||| || | ||| ||||| | |||||| || | | || || || Sbjct 3121 CCAGTACCAATACCTTCAGCACCATTCACTAAAACCATTGGAATAATGGGTGCATAAAAT 3062 Query 175901 TCTGGCTCAATGGGGCGACCATCGTCATCCAAATAGTTGAGAATTGGATCATCTCTCGGA 175960 |||||||| | | || || || || | || | | ||||||||||||| || | Sbjct 3061 TCTGGCTCTACCATGAGATTGTCATCTTCGAGGTAATGCAAAATTGGATCATCT-TCAGG 3003 Query 175961 TC-AAAGATCTTTCGGGCATCTTTTG--TGAGCTTTGTAAAGATATACCTCGTTTGAGAC 176017 || ||| ||||||| | || | | | | | |||| ||| || | | || Sbjct 3002 TCTAAAAATCTTTCTTG--TCAGTGGATTCAACATTGTGTTGATGTAACGAGCACTAGCA 2945 Query 176018 GCATCCTTACCACCCATGAGACGCGTACCAAACTGACCACACGGCTCAAGAAGATTGATA 176077 ||||| || || ||| | | || |||||||||||||| || | ||| | || ||| Sbjct 2944 GCATCTTTTCCTCCCCTTAATCGAGTACCAAACTGACCGATAGGTTGAAGCAAGTTTATA 2885 Query 176078 TTGTTTGAACCCATGTAGTCATTCGCCAACTTGACAATCGTGTCCGCGAGAGAGACTTCA 176137 ||||| || || | |||| | || || |||||||| || | || || ||||| Sbjct 2884 TTGTTAGAGCCTACAAAGTCTTGTGCTAAATTGACAATAGTTGCTTGCAGTGAAGCTTCA 2825 Query 176138 CCGTGGTGGTACG-CACTCTTCTCTGCGACAAATGCCGCCAACTGCGCCACTTTCATCTC 176196 ||||| ||||| | | |||| || || ||| | | ||||| || || ||||||| ||| Sbjct 2824 CCGTGATGGTAAGCCGATCTT-TCGGCAACAGAACCAGCCAATTGTGCGACTTTCACCTC 2766 Query 176197 ATCCTTGAGATTCTTGTGGAAACATGCGTACATAACCTTGCGTTGCGAAGGCTTGAGACC 176256 ||| ||| || ||||| | | | || || || ||||| |||||| | ||| Sbjct 2765 TCGCTTATCATTTCTGACAAAACAAGTGAATATGACTTTACGTTGGCCAGGCTTCAAACC 2706 Query 176257 ATCC 176260 |||| Sbjct 2705 ATCC 2702 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 541181109460400