Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Picea_20abies_20[ConGenIE_20PRJEB1822-1.0_202015-05-12] 10,253,695 sequences; 12,301,475,675 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq220612 107 2e-18 seq447055 95.1 1e-14 >seq220612 Length=9589 Score = 107 bits (118), Expect = 2e-18 Identities = 257/385 (67%), Gaps = 14/385 (4%) Strand=Plus/Minus Query 11505 ATCGAAACGACCTGGGCGGAGTAGAGCATCATCAAGAATATCGACACGGTTTGTAGCGGC 11564 ||| ||||| |||||||| | | |||| ||||||| ||||| | | ||| || || || Sbjct 3258 ATCAAAACGCCCTGGGCGCAACAAAGCAGCATCAAGTATATCAGCCCTGTTGGTTGCAGC 3199 Query 11565 AATGACTACAATGCCAGTCTCATTGTCGAAACCGTCCATTTCTGTGAGAAGCTGGTTGAT 11624 ||| || | || ||||| | || ||||| ||||||||||| |||||||| || | Sbjct 3198 AATCACAATGATACCAGTGTTCCCTTCAAAACCATCCATTTCTGTAAGAAGCTGATTCAG 3139 Query 11625 CGTCTGTTCACGCTCATCGTTGGAGGGCATACCACCT------GCCGAACGCTTCTTACC 11678 || ||||| |||||||| || | | |||||| | | || | |||| Sbjct 3138 GGTTTGTTCTCGCTCATCATT-----TCCT-CCACCTATTCCAGTTCCTCTCTGCCTACC 3085 Query 11679 GACAGCGTCAATCTCATCGATGAATACGATACACGGTTGGTTGGCACGTGCCTGTTCGAA 11738 || || ||||| ||||||| ||| || || || || || | |||| || ||| Sbjct 3084 AACTGCATCAATTTCATCGACGAAAACAATGCAAGGGGCATTTTCTTTGGCCTTTTTGAA 3025 Query 11739 AAGTTCACGTACACGCTTCGCTCCAACACCTACGAACATCTCAACGAAGTTTGCGGCAGA 11798 || ||||| || | ||||| | ||| || ||||||||||| || | | | || Sbjct 3024 CAGGTCACGCACTCTAGATGCTCCGATACCGACAAACATCTCAACAAACTCAGACCCTGA 2965 Query 11799 -ACACTGAATGAAGGGAACATTAGACTCACCAGCGATGGCTCGAGCGAGGAGAGTCTTAC 11857 | | ||| |||||| ||| || || || || ||||| || || | |||||| | Sbjct 2964 GATAGAGAA-GAAGGGTACACCAGCTTCCCCTGCAATGGCCTTGGCTAGCAAAGTCTTCC 2906 Query 11858 CCGTACCAGGTGCACCAGCGAGAAG 11882 | || || |||| ||| | ||||| Sbjct 2905 CAGTCCCTGGTGGACCCACAAGAAG 2881 >seq447055 Length=4881 Score = 95.1 bits (104), Expect = 1e-14 Identities = 250/379 (66%), Gaps = 2/379 (1%) Strand=Plus/Minus Query 11592 GAAACCGTCCATTTCTGTGAGAAGCTGGTTGATCGTCTGTTCACGCTCATCGTTGG-AGG 11650 ||| |||||||| || || | ||||| ||||||||||| || | ||||| || | Sbjct 3039 GAACCCGTCCATCTCCGTCAACAGCTGATTGATCGTCTGCTCCCTTTCATCATTACCACC 2980 Query 11651 GCATACCACCTGCCGAACGCTTCTTACCGACAGCGTCAATCTCATCGATGAATACGATAC 11710 || | | || ||| | | | | || || |||||||| || ||||| || ||||| | Sbjct 2979 GCCGAGC-CCGGCCCCCCTTTGCCTCCCTACCGCGTCAATTTCGTCGATAAAGACGATGC 2921 Query 11711 ACGGTTGGTTGGCACGTGCCTGTTCGAAAAGTTCACGTACACGCTTCGCTCCAACACCTA 11770 | || ||||| |||| ||||| || || || || || ||| || || || | Sbjct 2920 AGGGCGCCTTGGCCTTGGCCTTCTCGAACAGGTCCCGGACCCGGGACGCACCTACGCCGA 2861 Query 11771 CGAACATCTCAACGAAGTTTGCGGCAGAACACTGAATGAAGGGAACATTAGACTCACCAG 11830 |||| | ||| ||||| | | || | || || |||||| || || ||| || | Sbjct 2860 CGAAGAGCTCGACGAACTCCGACGCCGCGCATGAAAAGAAGGGGACCCCAGCCTCCCCTG 2801 Query 11831 CGATGGCTCGAGCGAGGAGAGTCTTACCCGTACCAGGTGCACCAGCGAGAAGGGCGCCAC 11890 || || || || || || ||||| ||||| || || | ||| | || | | || Sbjct 2800 AGACCGCCCGGGCCAGCAGGGTCTTGCCCGTCCCCGGCGGACCGACAAGCAAGCATCCCT 2741 Query 11891 GGGGGATCTTGGCACCACTTCCAAAGTAGCGCTCAGGCTTCTTGAGGAAGTCCACAATCT 11950 ||||||||||||||| | || || ||||| || || | ||| ||||||| | Sbjct 2740 TGGGGATCTTGGCACCCAGTGCAGTATACTTATCAGGGTTTTTCAAGAAATCCACAACTT 2681 Query 11951 CCTCAAGTTCCTCCTTGGC 11969 ||| ||| || |||||| Sbjct 2680 CCTGAAGCTCAAGCTTGGC 2662 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 513486246671000