Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Picea_20abies_20[ConGenIE_20PRJEB1822-1.0_202015-05-12] 10,253,695 sequences; 12,301,475,675 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq220612 131 2e-25 seq6585 118 1e-21 seq178673 93.3 4e-14 seq177539 86.0 6e-12 seq9369708 84.2 2e-11 seq2888806 84.2 2e-11 seq1818012 84.2 2e-11 seq1734642 84.2 2e-11 >seq220612 Length=9589 Score = 131 bits (144), Expect = 2e-25 Identities = 300/444 (68%), Gaps = 6/444 (1%) Strand=Plus/Minus Query 9194 ATCAAAGCGACCTGGACGAAGGAGCGCGTCATCAAGGATATCAACGCGATTCGTCGCGGC 9253 |||||| || ||||| || | | || ||||||| |||||| | | || || || || Sbjct 3258 ATCAAAACGCCCTGGGCGCAACAAAGCAGCATCAAGTATATCAGCCCTGTTGGTTGCAGC 3199 Query 9254 GATGACAACAATACCTGT-TTCATTATCAAAACCATCCATCTCTGTCAAAAGTTGGTTAA 9312 || |||| ||||| || ||| | |||||||||||||| ||||| | ||| || || | Sbjct 3198 AATCACAATGATACCAGTGTTCCCT-TCAAAACCATCCATTTCTGTAAGAAGCTGATTCA 3140 Query 9313 TAGTTTGTTCCCGTTCATCATTCGCT-GGCATACCACCAGCACTGCGTTGCTTTCCCACG 9371 |||||||| || |||||||| || | || |||| | | ||| | || || Sbjct 3139 GGGTTTGTTCTCGCTCATCATTTCCTCCACCTA-TTCCAGTTCCTCTCTGCCTACCAACT 3081 Query 9372 GCATCAATCTCATCAATGAAGACAATACATGGTTGATTTTCGCGGGCGATTTCAAAGAGA 9431 |||||||| ||||| | ||| ||||| || || |||||| ||| ||| || || Sbjct 3080 GCATCAATTTCATCGACGAAAACAATGCAAGGGGCATTTTCTTTGGCCTTTTTGAACAGG 3021 Query 9432 TCGCGAACCCTTTTGGCGCCCACACCAACAAACATCTCCACAAAGTTTGCGGCGGAACAT 9491 || || || || || || | ||| ||||||||||| ||||| | | | | | || Sbjct 3020 TCACGCACTCTAGATGCTCCGATACCGACAAACATCTCAACAAACTCAGACCCTG-AGAT 2962 Query 9492 TG-GATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAGAGTCTTACCCGT 9550 | || |||||| ||| || ||| || |||||||| ||| || | |||||| || || Sbjct 2961 AGAGAAGAAGGGTACACCAGCTTCCCCTGCAATGGCCTTGGCTAGCAAAGTCTTCCCAGT 2902 Query 9551 ACCTGGCTTACCCGCGAGGAGGGCACCCCGTGGAATCTTGGCGCCACTTCCAAAGTATCT 9610 ||||| |||| | || || | || ||||| || ||| || || | || Sbjct 2901 CCCTGGTGGACCCACAAGAAGAACTCCTTTAGGAATACGAGCTCCAATTGCAGTAAACCT 2842 Query 9611 CTCAGGTTGCTTGAGAAAATCCAC 9634 ||| |||| ||| || || || || Sbjct 2841 CTCTGGTTTCTTCAGGAACTCAAC 2818 >seq6585 Length=56338 Score = 118 bits (130), Expect = 1e-21 Identities = 194/276 (70%), Gaps = 8/276 (3%) Strand=Plus/Plus Query 9204 CCTGGACGAAGGAGCGCGTCATCAAGGATATCAACGCGATTCGTCGCGGCGATGACAACA 9263 || || ||||| | || |||| || | |||||| ||||| || || |||||||||| Sbjct 3592 CCAGGCCGAAGTAAAGCTGCATCCAGCACATCAACTCGATTGGTAGCTGCGATGACAATC 3651 Query 9264 ATACCTGT-TTCATTATCAAAACCATCCATCTCTGTCAAAAGTTGGTTAATAGTTTGTTC 9322 | || || ||| | ||||| ||||||||||| || | | |||||| | || ||||| Sbjct 3652 ACTCCAGTGTTCCCT-TCAAATCCATCCATCTCAGTAAGCAATTGGTTCAATGTCTGTTC 3710 Query 9323 CCGTTCATCATTCGCTGGCATACCA---CCAGCACTGCGTTGCTTTCCCACGGCATCAAT 9379 ||||||||||| || |||| || | | | ||| ||||||| ||||| | Sbjct 3711 TCGTTCATCATTGCCT---CCACCAATTCCTGTTCCCCTCTGCCTTCCCACTGCATCGAG 3767 Query 9380 CTCATCAATGAAGACAATACATGGTTGATTTTCGCGGGCGATTTCAAAGAGATCGCGAAC 9439 ||||| ||||| | |||||| ||| |||||| || | | || ||||| ||||| Sbjct 3768 TTCATCTATGAAAATAATACAAGGTGCATTTTCCTTTGCCCTCTTGAAAAGATCACGAAC 3827 Query 9440 CCTTTTGGCGCCCACACCAACAAACATCTCCACAAA 9475 ||| ||| || || || ||||||||||| | ||| Sbjct 3828 CCTAGAGGCTCCTACTCCTACAAACATCTCTATAAA 3863 >seq178673 Length=11302 Score = 93.3 bits (102), Expect = 4e-14 Identities = 246/368 (67%), Gaps = 17/368 (5%) Strand=Plus/Plus Query 6949 CACCACAAAACGAGGAGACACCCTTCTACCCACGCTCGGTC--TACGGAGTCTCAAAGGT 7006 |||| || || ||| | || |||||| ||||| | ||| || | ||||| ||| | Sbjct 3318 CACCCCAGAATGAGAACACCCCCTTCCACCCAAGAA--GTCCTTATGCTGTCTCCAAGCT 3375 Query 7007 TGCGGCACATTGGC--TC-GTCAAAAATTACCGCGAGTCTTACGGACTGTTTGCGTGCTC 7063 ||| || |||||| || ||||| ||| | ||| | || ||| ||||||| ||| Sbjct 3376 TGCAGCCCATTGGTATTCTGTCAAC---TACAGAGAGGCATATGGAATGTTTGCCTGCAA 3432 Query 7064 CGGAATCCTCTTCAACCATGAATCACCGAGACGAGGTGCAGACTTTGTCACAAAGAAGAT 7123 || ||||| |||||||| || || || || |||||| |||||||||||| |||||| Sbjct 3433 TGGGATCCTGTTCAACCACGAGTCCCCAAGGAGAGGTGAGAACTTTGTCACAAGGAAGAT 3492 Query 7124 TACCGAGGGTATCAAACAAATCATGAAGGG---TGAAAAGGAGTTCATTGAATTGGGTAA 7180 ||| || | | ||||| | || | | ||| || | | ||||| || Sbjct 3493 CACCAGGGCTGTGGGGAGAATCAAAATTGGGCTTCAGAAGAAG---CTGTATTTGGGCAA 3549 Query 7181 CATAAACGCGGAGAGAGATTGGGGTCACGCGAAGGACTATGTTGAAGCCATGTGGCTCAT 7240 | || || || |||||||| || ||||||||| || || |||||| | || Sbjct 3550 TCTCAAGGCCTCCAGGGATTGGGGATTTGCTGGGGACTATGTGGAGGCAATGTGGTTGAT 3609 Query 7241 GCTTCAACAAGAGGAAGCCGACGAATATGTAGTAGCAACGGGTGAGACCCATTCAG-TGA 7299 | | || ||||| | |||| || ||||| || || || | ||| | |||| | | ||| Sbjct 3610 GGTGCAGCAAGATAAGCCCGATGACTATGTTGTTGCCACTGATGATAGCCATACCGTTGA 3669 Query 7300 GGCGGTTC 7307 || | ||| Sbjct 3670 GGAGTTTC 3677 >seq177539 Length=11366 Score = 86.0 bits (94), Expect = 6e-12 Identities = 119/164 (73%), Gaps = 2/164 (1%) Strand=Plus/Plus Query 106241 TCATCTGAATCAAATG-CGTAGCGGCACAAAATAAATACATCCGCGAGACCTTGAACACC 106299 || ||||| ||||||| | || | |||||||||| ||| || || || |||||||| Sbjct 5122 TCTTCTGAGTCAAATGGCATACCAAG-CAAAATAAATGTATCAGCAAGGCCCTGAACACC 5180 Query 106300 CAAACCAATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTCAACGGGATAAAAATT 106359 | |||||||||||||| |||||||| |||| ||||| || || ||||| |||| Sbjct 5181 AATGCCAATAGGTCTGTGACGCATATTTGACTGCTTTGCAGTTTCTACAGGATAGTAATT 5240 Query 106360 TCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGA 106403 ||||||| | ||| || |||| ||||| || ||||| Sbjct 5241 CACATCAATGATTTTGTTCAGGTTTTGAGTAACTATTGATGTGA 5284 >seq9369708 Length=212 Score = 84.2 bits (92), Expect = 2e-11 Identities = 63/74 (85%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 136169 TATAGTGTAGTGGTCATCACTTTGGACTTTGAATCCAACAACCCTGGTTCAAATCCAGGT 136228 ||| |||||||||| | ||||||||||||||||||||| ||| ||||||||||| || Sbjct 125 TATGGTGTAGTGGTTAGCACTTTGGACTTTGAATCCAATGACCTAGGTTCAAATCCCAGT 66 Query 136229 AGGAGCTTTACCCA 136242 |||| ||||| ||| Sbjct 65 AGGACCTTTAGCCA 52 >seq2888806 Length=556 Score = 84.2 bits (92), Expect = 2e-11 Identities = 63/74 (85%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 136169 TATAGTGTAGTGGTCATCACTTTGGACTTTGAATCCAACAACCCTGGTTCAAATCCAGGT 136228 ||| |||||||||| | |||| ||||||||||||||| ||||| ||||| ||||| ||| Sbjct 466 TATGGTGTAGTGGTTAGCACTCTGGACTTTGAATCCAGCAACCTGGGTTCGAATCCCGGT 525 Query 136229 AGGAGCTTTACCCA 136242 |||| ||||| ||| Sbjct 526 AGGACCTTTAGCCA 539 >seq1818012 Length=1111 Score = 84.2 bits (92), Expect = 2e-11 Identities = 63/74 (85%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 136169 TATAGTGTAGTGGTCATCACTTTGGACTTTGAATCCAACAACCCTGGTTCAAATCCAGGT 136228 ||| |||||||||| | ||||||||||||||||||||| ||| ||||||||||| || Sbjct 664 TATGGTGTAGTGGTTAGCACTTTGGACTTTGAATCCAATGACCTAGGTTCAAATCCCAGT 605 Query 136229 AGGAGCTTTACCCA 136242 |||| ||||| ||| Sbjct 604 AGGACCTTTAGCCA 591 >seq1734642 Length=1176 Score = 84.2 bits (92), Expect = 2e-11 Identities = 63/74 (85%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 136169 TATAGTGTAGTGGTCATCACTTTGGACTTTGAATCCAACAACCCTGGTTCAAATCCAGGT 136228 ||| |||||||||| |||||| |||||||||||||||| ||| |||||||||| ||| Sbjct 115 TATGGTGTAGTGGTTATCACTCTGGACTTTGAATCCAATGACCTGAGTTCAAATCCTGGT 56 Query 136229 AGGAGCTTTACCCA 136242 |||| ||||| ||| Sbjct 55 AGGACCTTTAGCCA 42 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 514362260261800