Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Picea_20abies_20[ConGenIE_20PRJEB1822-1.0_202015-05-12] 10,253,695 sequences; 12,301,475,675 total letters Query= NC_015932.1 Length=31616 Score E Sequences producing significant alignments: (Bits) Value seq416950 646 0.0 seq1393656 253 4e-63 >seq416950 Length=5269 Score = 646 bits (716), Expect = 0.0 Identities = 1350/2003 (67%), Gaps = 57/2003 (3%) Strand=Plus/Plus Query 4745 AGAGTCTTGTCCTTCCATGGCCTTAGGCGCCGCTTCAGGGTGGTCTCCGTCACTGTGAAG 4804 || |||||||| ||||| ||||| | ||| | | || || || || |||||||| Sbjct 452 AGGGTCTTGTCTTTCCAAGGCCTCACTGTGCGCGTTAAAGTTGTTTCGGTGACTGTGAAC 511 Query 4805 GGCTGCACATGGGACTGCACGCTGGTGAGGGTGCGGCGGAGACTCATTCTGCTGGTGTGG 4864 || | | | | || | | |||||| || | ||||| | ||||||||| Sbjct 512 GGGGCCGCGTTGCTTTGGTTCGTAGCGAGGGTCCGTTTTAAACTCAGGCGGCTGGTGTGA 571 Query 4865 AAGACATCGCTTCCGTGCTGCATGTCGGCAAGGTAGCAAGCTTTTAGCAC----GTCATA 4920 ||| | ||| || |||||| ||| | | |||||| |||||| |||||| Sbjct 572 AAGCGCTGGCTCCCCTGCTGCGCGTCAGACAAGTAGCA----TTTAGCCAAAGTGTCATA 627 Query 4921 GGACAGAGAAGAGGTGGCATGACCCTTGGCTCTAAGCTTGCCCTTTCCTACGTGCCCGCA 4980 | | || || ||||||||||| || | || || || || || || ||||| || Sbjct 628 ACATAATTCAGTAGTTGCATGACCCTTCGCCCGCAGTTTACCTTTACCCACATGCCCACA 687 Query 4981 GGACACACAAGTGGTGTCTTTGAGAGCATATAGCTTAGGGGCGAGATATACCGACTCTGA 5040 | | |||| |||| ||| | |||||| || ||||| |||||| | || || || || Sbjct 688 GCAAGTACAAACAGTGTTTTTTAAAGCATACAGTTTAGGAGCGAGAAAGACAGATTCAGA 747 Query 5041 GCTGTAGGCGTCGCTGCCGCACTTTTCACACTGGGTTTCGCACTCCACCAGCCAAGTTAG 5100 || | || || || ||||||||||| || || || || |||| ||| || | Sbjct 748 ACTAAAAGCATCAGACTTACATTTTTCACACTGAGTCTCACATTCAACCAACCATGTAAT 807 Query 5101 CTCTGGGTTGCTGGGGTCAAACACTAGTTTGCCTCCAttttttttGAGCCGATGCTTACC 5160 |||||| | || ||||| ||||| || ||||||||||| || | || || ||||| Sbjct 808 AGATGGGTTTTTTGGATCAAAAACTAGCTTCCCTCCATTTTTCTTAATGCGGTGTTTACC 867 Query 5161 TTTTGTTTCCATCAGTTTGTATCCCTCTAAGGTGGTGAAGAGACTATCTGTGTCCCCGTA 5220 | || ||||| || || |||||| ||| || | || || ||||||||||| Sbjct 868 TCTTTGCTCCATGAGCCGGTGCCCCTCTTCGGTCACAAACAAGCTGTCAGTGTCCCCGTA 927 Query 5221 GACAGATTTTAGCTGGCGGTCT--TCAAGAGGGATGCCCACGTCATCTGCGTAGAGAAAC 5278 ||||||||||| | | | | | || || | || ||| || ||||| | ||| Sbjct 928 GACAGATTTTA--TAGTTTTTTGATGTAGTGGCTTTCCTCTGTCTTCGGCGTATAAAAAT 985 Query 5279 TGAGACCACTCTGACACGAATGCTCGGGTCCAAGCCAAAACAAAGGAGGCAATCTGGGAA 5338 | | |||||| ||||| ||| ||| ||||| ||||||||||| || ||||| |||||| Sbjct 986 TCTGCCCACTCAGACACAAATACTCTAGTCCAGGCCAAAACAAACGAAGCAATGTGGGAA 1045 Query 5339 GGGTACCTGTTATTGGCTATGAGCGGAGAAGCCCGCTCTAGGGTTTGCAGGCAAAAACTA 5398 | ||||||||| || |||| | ||||| |||| || || | ||| | | Sbjct 1046 GCGTACCTGTTGTTTTCTATTAAAGGAGAGTTGTTTTCTAAAGTGTGTAAGCATATGTCA 1105 Query 5399 TCATCCTCTGCATCCAGAAATGTGATTGGCTTGTAGGTATATG--ACGTCATGCGGTCAT 5456 ||||| || | || | ||| ||||||||||| || |||||| |||| | | || | Sbjct 1106 TCATCTTCAGTTTCTAAAAACGTGATTGGCTTATACTTATATGTCACGTGA--CTATCTT 1163 Query 5457 TGCCAATAAAAGGGGT---CTCTTCGGGGTCCTCTGACAGTGGACTTGCGTCTACCTCGG 5513 || |||||| |||| ||||||| || || |||| | |||| ||||| Sbjct 1164 TGGGTATAAAAAGGGTGTGCTCTTCGTTTTCATC---------ACTTTCATCTAACTCGG 1214 Query 5514 AGGAAGGCGTGTCTGCAGGTGGGTACGCTACGACAAATTCTGGCATGATTTCTGCGCACA 5573 ||||| |||||||||||| |||||||||||||||||||| ||||| || | | Sbjct 1215 CAGAAGG------TGCAGGTGGGTAAGCTACGACAAATTCTGGCATAATTTCAGCACTAA 1268 Query 5574 GATTATCTGTTTCTATGTAGGAAGAAGATTTGACTACAAATTCCCCGGCCGCAATTTCCT 5633 || || ||||||||| | || |||||||||| ||| | || || || | Sbjct 1269 AGTTGTCAGTTTCTATGAATGATGAAGATTTGATGGAAAAGTTACCTCTGGCGATGGTTT 1328 Query 5634 TTGCAAGGTTATGCTCAATTTGGTCAGAAAACACCGtttttttGTTGTCTAACTTGGTTG 5693 ||| | | || | |||||| |||||||| ||||||||||||| || || || | Sbjct 1329 TTGACGCGCTGGCTTCTAGTTGGTCTGAAAACACAATTTTTTTGTTGTCCAATTTAGTGG 1388 Query 5694 CAAATGAACCGTAGAGGGCGTTGGATAAAAGCTTGGCGATGCTTCGCATGGTTTGGTNNN 5753 |||| || || | ||||||||| | ||||| || ||||||||||||||||||| Sbjct 1389 CAAAGCTGCCATATAAGGCGTTGGAAAGTAGCTTAGCTATGCTTCGCATGGTTTGGTTCT 1448 Query 5754 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTTGAGTTGCACATACTCCCTGGCTATGC 5813 ||| || ||||| || || |||| | || Sbjct 1449 TTTCTTTGTCTGCTTTTTCTTTGGCTCCGATGTTTAGCTGCACGTATTCTTTGGCCACGC 1508 Query 5814 ATTTCCACTCTGGAAAGACCGTGGCGCGCGCGTCCGGAACGAGGGTGACCTTCCAGCCTC 5873 | ||||||||||| |||| || | | |||| |||| | | || ||| |||| Sbjct 1509 ACTTCCACTCTGGGAAGATGGTTGTTCTTTCGTCTGGAAGAATGCGCACTGCCCATCCTC 1568 Query 5874 GGTTGTGGAGGGTTATTACATCAATGGATGTAGCTATTTCCCCCCGGAGGGGCTCGTTGG 5933 |||||| | || || | || || || ||||||| ||| || || | |||||||| | Sbjct 1569 TGTTGTGCAAAGTAATCAAGTCTATAGAAGTAGCTACTTCTCCTCGCAAAGGCTCGTTAG 1628 Query 5934 TCCAGCATAGCCTTCCGCCTTTTCTGGAACAAAATGGCGGCAGGACGTCAAGATGGCTGT 5993 ||||||| |||||||||||||||||||| ||||| || ||||| | |||||| | Sbjct 1629 TCCAGCACAGCCTTCCGCCTTTTCTGGAGCAAAACGGAGGCAGTTCATCAAGAAACAACT 1688 Query 5994 CTTCAGGGGGGTCGGCGTCGATGGTGAAAATGGCGGGCAGCAGCTCCGCGTCAAAATAAC 6053 | || || || || |||||||||||||||||| | || || || | |||||||||| Sbjct 1689 CGTCTGGAGGATCCGCGTCGATGGTGAAAATGCCTGGAAGAAGACACTCGTCAAAATAGT 1748 Query 6054 TAATTTGGGGACACT--GTT-----GCATCTTGAGCTCATACGCCCGCATGGCCAGGGCC 6106 ||||| | | || ||| || | ||| | ||| | |||| || | ||| Sbjct 1749 CAATTTTTTG-CTCTAAGTTTTCAAGCTTTCTGATC-CATTCTGTCGCA--GCTAAGGCT 1804 Query 6107 CTCTCATAGGGGTTGAGAGGGGCGCCGGCGGGAAACGGATGGGTGAGGGCGCTCGCATAC 6166 || ||||| || || | ||| ||| |||||| ||||| || || || || |||||| Sbjct 1805 CTTTCATACGGATTTAAAGGCTGCCCGCTGGGAAAAGGATGCGTTAGAGCACTGGCATAC 1864 Query 6167 ATGCCACAGATGTCATAAACAAACACGGGTTCTGCTAGAACGCCTATGTAAGTGGGGTAG 6226 ||||| ||||||||||| ||| | | || | | | | | ||| || |||||||| ||| Sbjct 1865 ATGCCGCAGATGTCATACACATAAATTGGCTGTTCCATGATGCCAATATAAGTGGGATAG 1924 Query 6227 CAGCGCCCCCCGCGGATGCTGGCGCGCACGTACTCATACATCTCATTGGAGGGGGCCAGC 6286 ||||| || || |||||||| ||| ||||| |||||||| |||| || || || | Sbjct 1925 CAGCGACCACCACGGATGCTCTGGCGGACGTAGTCATACATTTCATGAGATGGTGCTAAT 1984 Query 6287 AGGATGGTAT-TAAAATGACCCTGTCCGGGCTGTTCCGCTCTGTACAATATTTGTTTAAA 6345 | | | | | ||| | | | | || || | ||||||| |||||||| ||||| Sbjct 1985 AAAACGTTGTCTAAGTTTGCTTTATTTGGCCTAA-CTTCTCTGTATAATATTTGCTTAAA 2043 Query 6346 AATGGCGTGAGAGTTTGAGCTGATGGTGGGCCGCTGGAACACGTTGAAAGATGCAGCAGG 6405 ||| || |||||||| ||||| || ||||| | || || | ||| || || ||| |||| Sbjct 2044 AATTGCATGAGAGTTAGAGCTAATAGTGGGTCTTTGAAAAATGTTAAATGAAGCATCAGG 2103 Query 6406 TAAGTTTACCGACGTGGCGATAAACTCTTGGTAAGACGCTATAAGCTTCTGCACCAGCTG 6465 |||||| || | || ||||| | || |||||| || || || | || || | Sbjct 2104 TAAGTTCACTTGAGAAGCAATAAAGTTTTTGTAAGATTCTTGGAGTTTGTTTACTAG--G 2161 Query 6466 GGCGGTGAC-CTG-CACATCCAGCGCGCAGTAATCCAGGGTTTGCTGGACAATGTCGTAA 6523 | || || | || ||| || || | || || | ||| |||||||||| ||||||||| Sbjct 2162 GCCGATGTCACTAACACGTCTTGCACACAATAGTGCAGCGTTTGCTGGATTATGTCGTAA 2221 Query 6524 GCGCC--CGtttttttATCTAACCACAGGGCCTTGTTGAGAAGATACTCCTCCCGGTCCT 6581 || || ||||||||| ||| |||||| ||||||||||| ||||||| || | | | Sbjct 2222 GCCCCCACGTTTTTTTCTCT--CCACAGAGCCTTGTTGAGTTGATACTCTTCGCTGGATT 2279 Query 6582 TCCAGTACTCCACCGC-GGGAAATCCCTGCTCGTCTTGCTGGTAGGTGCCCAACATGTAA 6640 ||||||| || || ||||| || | ||| ||||| ||||| | || | | || Sbjct 2280 TCCAGTA-TCTTAGGCTTGGAAAGCCATCCTCATCTTGTTGGTAAGACCCTATTCTATAG 2338 Query 6641 AAGTCATTAACGGCCTGGTAGGGACAGCACCCTTTGGCCACAGGCAGGCTGTAGGCTTTG 6700 || ||||| || || | ||| ||||||| ||||| | |||||||| ||| || Sbjct 2339 AATTCATTTACTGCTTCGTACGGACAGCTTCCTTTTTCTACAGGCAGCTCGTAAGCCCCA 2398 Query 6701 GCGGCGTTTCTTAGGCTGGTGTG 6723 || || ||||||| ||| ||||| Sbjct 2399 GCAGCATTTCTTAAGCTAGTGTG 2421 Score = 253 bits (280), Expect = 4e-63 Identities = 382/541 (71%), Gaps = 4/541 (1%) Strand=Plus/Plus Query 8031 GGAGAATACCACGGGTCCTGTCACCTTGAACCTAAAAGAGAGTTCCATGGAGTCAACCTC 8090 ||| |||||||| || || ||||| ||||||| ||||| | |||||| ||||||| || Sbjct 3720 GGAAAATACCACTGGGCCGGTCACTCTGAACCTGAAAGATATTTCCATAGAGTCAATGTC 3779 Query 8091 TGCATCATTGATAGCCACCTGCCTCAGAATCTCTGCCACGTCCCCACTGTTGTCTTGATA 8150 ||| ||||| | ||||| ||| | | |||||| |||||| || ||||| || ||||| Sbjct 3780 TGCGTCATTAACTGCCACTTGCTTTAAAATCTCACTCACGTCTCCGCTGTTATCGTGATA 3839 Query 8151 GGCAATGTCTGCCATGAACTGCTCCACTTCCTCCTCCTCTAGCTCCCCCATGCCCGCCCT 8210 || || |||||||| |||||||| | || |||| ||||| ||| || | || || || Sbjct 3840 AGCTATTTCTGCCATAAACTGCTCAATCTCTTCCTGCTCTAACTCTCCTCTCCCTGCTCT 3899 Query 8211 CTCTACGGTGGCGGCCAGGTCCCCCGAGACCCTCCCCATAACCTGACTGAATGCATTTTC 8270 ||| || ||||| |||| ||| | | ||| | | ||| || || | ||| Sbjct 3900 CTCAACTGTGGCAGCCAAGTCAATGCTAATGCGAGACATGATGTTACTAAAAGCCTGTTC 3959 Query 8271 TCCCATCTCATTCCACACCCTGCTGTACACCACCCTTCCGCCGCTGTCCCTGGCTCGCAT 8330 || | ||||||||||| ||||||||||| | ||| | || ||||||| ||| Sbjct 3960 CCCATTTTCATTCCACACTCTGCTGTACACAATTTGTCCATCTTCGTTTCTGGCTCTCAT 4019 Query 8331 GACCACCTGGGCCAGCTCCAGGTCCAGCCAGCGCG--AGGCGGGCGGATACAGGCGCAGG 8388 || ||||| ||||| | || || | | | | ||| ||||| | | Sbjct 4020 TACTACCTGCGCCAGATTAAGCATCACATATCTCCCAAAAGGGGAAGATACC--CTAATT 4077 Query 8389 TTGTGATTTAGGTAATTGAGGGTGGTGGCGATGTGCTCCGCCACaaaaaaaTACATAACC 8448 | |||||||| ||| || || ||||| || ||||| || ||||||||||| |||| ||| Sbjct 4078 TGGTGATTTAAGTAGTTTAGTGTGGTAGCAATGTGTTCTGCCACAAAAAAGAACATCACC 4137 Query 8449 CAGCGACGGATGGTAAGTTCATTCACATTGCCTAGCATTTCCAGCCTCTGAAAGGTCTCA 8508 ||||| ||| || |||||| | | |||||| |||| | ||||| |||| Sbjct 4138 CAGCGTTGGAGAGTTGTTTCATTAATGTCACCTAGCGCCTCCAAACGCTGAATAACCTCA 4197 Query 8509 TAAAAATCAATAGCAAAGTTAAAAAACTGCTCGTTGCGGGCAGACACTGTCAGTTCTTCT 8568 ||||||| | |||||||||||||||||||| ||| | |||||||| || || |||||| Sbjct 4198 TAAAAATTTACAGCAAAGTTAAAAAACTGCTGGTTTCTAGCAGACACAGTGAGCTCTTCT 4257 Query 8569 T 8569 | Sbjct 4258 T 4258 >seq1393656 Length=1543 Score = 253 bits (280), Expect = 4e-63 Identities = 382/541 (71%), Gaps = 4/541 (1%) Strand=Plus/Plus Query 8031 GGAGAATACCACGGGTCCTGTCACCTTGAACCTAAAAGAGAGTTCCATGGAGTCAACCTC 8090 ||| |||||||| || || ||||| ||||||| ||||| | |||||| ||||||| || Sbjct 28 GGAAAATACCACTGGGCCGGTCACTCTGAACCTGAAAGATATTTCCATAGAGTCAATGTC 87 Query 8091 TGCATCATTGATAGCCACCTGCCTCAGAATCTCTGCCACGTCCCCACTGTTGTCTTGATA 8150 ||| ||||| | ||||| ||| | | |||||| |||||| || ||||| || ||||| Sbjct 88 TGCGTCATTAACTGCCACTTGCTTTAAAATCTCACTCACGTCTCCGCTGTTATCGTGATA 147 Query 8151 GGCAATGTCTGCCATGAACTGCTCCACTTCCTCCTCCTCTAGCTCCCCCATGCCCGCCCT 8210 || || |||||||| |||||||| | || |||| ||||| ||| || | || || || Sbjct 148 AGCTATTTCTGCCATAAACTGCTCAATCTCTTCCTGCTCTAACTCTCCTCTCCCTGCTCT 207 Query 8211 CTCTACGGTGGCGGCCAGGTCCCCCGAGACCCTCCCCATAACCTGACTGAATGCATTTTC 8270 ||| || ||||| |||| ||| | | ||| | | ||| || || | ||| Sbjct 208 CTCAACTGTGGCAGCCAAGTCAATGCTAATGCGAGACATGATGTTACTAAAAGCCTGTTC 267 Query 8271 TCCCATCTCATTCCACACCCTGCTGTACACCACCCTTCCGCCGCTGTCCCTGGCTCGCAT 8330 || | ||||||||||| ||||||||||| | ||| | || ||||||| ||| Sbjct 268 CCCATTTTCATTCCACACTCTGCTGTACACAATTTGTCCATCTTCGTTTCTGGCTCTCAT 327 Query 8331 GACCACCTGGGCCAGCTCCAGGTCCAGCCAGCGCG--AGGCGGGCGGATACAGGCGCAGG 8388 || ||||| ||||| | || || | | | | ||| ||||| | | Sbjct 328 TACTACCTGCGCCAGATTAAGCATCACATATCTCCCAAAAGGGGAAGATACC--CTAATT 385 Query 8389 TTGTGATTTAGGTAATTGAGGGTGGTGGCGATGTGCTCCGCCACaaaaaaaTACATAACC 8448 | |||||||| ||| || || ||||| || ||||| || ||||||||||| |||| ||| Sbjct 386 TGGTGATTTAAGTAGTTTAGTGTGGTAGCAATGTGTTCTGCCACAAAAAAGAACATCACC 445 Query 8449 CAGCGACGGATGGTAAGTTCATTCACATTGCCTAGCATTTCCAGCCTCTGAAAGGTCTCA 8508 ||||| ||| || |||||| | | |||||| |||| | ||||| |||| Sbjct 446 CAGCGTTGGAGAGTTGTTTCATTAATGTCACCTAGCGCCTCCAAACGCTGAATAACCTCA 505 Query 8509 TAAAAATCAATAGCAAAGTTAAAAAACTGCTCGTTGCGGGCAGACACTGTCAGTTCTTCT 8568 ||||||| | |||||||||||||||||||| ||| | |||||||| || || |||||| Sbjct 506 TAAAAATTTACAGCAAAGTTAAAAAACTGCTGGTTTCTAGCAGACACAGTGAGCTCTTCT 565 Query 8569 T 8569 | Sbjct 566 T 566 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 89072146927015