Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Picea_20abies_20[ConGenIE_20PRJEB1822-1.0_202015-05-12] 10,253,695 sequences; 12,301,475,675 total letters Query= NC_016767.1 Length=60714 Score E Sequences producing significant alignments: (Bits) Value seq77950 208 3e-49 >seq77950 Length=20917 Score = 208 bits (230), Expect = 3e-49 Identities = 774/1203 (64%), Gaps = 24/1203 (2%) Strand=Plus/Minus Query 43896 AGCATGGCCCGCACGAACCTGTCCCATATCTCCATGGCCTCGCGCTTCTCGGGCATGTAG 43955 ||||| || || || ||| ||||||| | |||| | | ||||| || ||||| ||| Sbjct 14631 AGCATAGCTCGAACAAACTTGTCCCACTTGGCCATACCGGCTCGCTTTTCCGGCATATAG 14572 Query 43956 CTGTAGCGGTCATAGTGCCGCGAGCTGACGTCGTGCCGGCTATGGTTCTGAAGCCGGTCC 44015 | | || || |||| | ||| || ||||| ||| | || ||||| | || || Sbjct 14571 TTCCAACGATCGTAGTTCTTCGAACTTACGTCTTGCAGCGCGTGATTCTGGATTCGATCG 14512 Query 44016 CCTTATCTCCTGCGTCAGCCCGGCCTTGCCTGCCAGCGTTTTCCACGTCCGCCGCAGGTC 44075 | || |||| | | || |||| ||||||| || ||||| || || || ||||| Sbjct 14511 CGG-ATTTCCTTTGAGACACCCGCCTGTCCTGCCAATGTCTTCCAAGTTCGGCGGAGGTC 14453 Query 44076 GCGGTTCGTGATGTCCGGCAGCACGCCCCGGTCCCGTTGCCGCCAAAGGGCGGAATAGAG 44135 ||||||||| | | || | ||||| || || || |||||||| | | |||||| Sbjct 14452 GCGGTTCGTAACAACTGGAATGACGCCACGATCACGCTGCCGCCACATGAAACTATAGAG 14393 Query 44136 GGTGCCGTGACTGACGGGCTTCTCGGGATCCATCTGCGAGGGGAAGAACCAGCCGTGCTC 44195 |||||||| ||||| || | |||||| | ||| || |||||||| |||| || Sbjct 14392 CGTGCCGTGGCTGACCGGGCGCGACGGATCCTTGGCCGACGGAAAGAACCATCCGTACTT 14333 Query 44196 GTTCGTGCCGATTTCGTCCAGCAGCTCGATGGCGAGCGACGGCAGCGGGATCGTGTGAGG 44255 ||||| ||| | | || || ||| || | ||| | ||| || | || || Sbjct 14332 GTTCGGCTTGATCGACTTGATGAGTTCAGCGGCTAGAGGCGGGACCGGAATTGCATGCGG 14273 Query 44256 CTTCCCGTTCTTCGTCTTTGACCAGTCGAGCAGCCCTTCAGCCTTG--TCGTACTGGTCC 44313 | | |||||| || || ||||| || | | ||| | | | || | | |||| Sbjct 14272 CGTATTGTTCTTTGTTTTGGACCAATCAATGATATGTTC--CATGGCATCCCAGTTGTCC 14215 Query 44314 CGGTGCAGGGCGGCAATTTCCTCCACGCGCTGCCCGGTGAGCATCAGCAGGCGCATGGCG 44373 ||||||| || || || ||||| |||||||| || ||||||| | |||| || Sbjct 14214 TCGTGCAGGCGCGCGATCTCTTCCACCCGCTGCCCTGTAAGCATCAATATCCGCACAGCC 14155 Query 44374 TCAAGGTACGGGCCATGGATGGGCCTGTCCGGGTTTCCCAGCCAGTCCCACATGCGGCAG 44433 ||| || ||| | |||| || || | ||||| | | || | Sbjct 14154 CTGGTGTATGGAGGATGCACGGGCGCATCAGGACACTCTAGCCACCGGTAAAGGCACACG 14095 Query 44434 TAGTCCGCCTCACTGAGCCAGCGCGTGCCAACCACCTTAGGCTCGGTGGGGATCGAGGCC 44493 | ||| | || ||||||||||| ||| | ||| ||||| || || || || Sbjct 14094 AACTCCTCTTCGTCCAGCCAGCGCGTCCCAGTCTTCTTCGGCTCAGTCGGAATTCCCGCT 14035 Query 44494 GCCGGGTTGTGAATGAGCTTGAACCGGCGCGGGCTGCTGGAGCGGTAGTCCAGCTCCGAT 44553 |||||||||| | ||| ||| || ||| | | | |||||| | || ||| Sbjct 14034 GCCGGGTTGTACACGAGGCGGAATCGCCGCTGCGAAGTTCTTCTGTAGTCGTGTTCTGAT 13975 Query 44554 TTCAGCCCCCACGCGAAGGCCGCCCGGATGTAGGAGCGAACGTGGTCCGCCATGGAGTTT 44613 ||||| ||||| ||| || || ||| ||| ||||||||| || ||||||| || Sbjct 13974 TTCAGACCCCAACTGAATGCGGCGTGGACATAGCTGCGAACGTGATCGGCCATGGCCCTT 13915 Query 44614 TTGCCGCGCTCGAAGATGGGCCGGAGCACGTTCAGCACGTCCTCTGGCTCGATGTCGCGG 44673 || || |||||| ||||||| |||| || | | || |||||||| ||||| |||||| Sbjct 13914 TTCCCCCGCTCGTAGATGGGGCGGATGACCTCGACGACTTCCTCTGGTTCGATCTCGCGG 13855 Query 44674 GCGAGGCGGTTCCGGCCGAGACCATCCGTGATTTTATCCAGCCCCTTCTTCG----CTTC 44729 || | | ||| ||||| || |||| || |||| || || || | || ||| Sbjct 13854 GCTGGTCTGTTTCGGCCAAGCGTGTCCGCAATCTTATTGAGTCCTTTTTCCGTCTCTTTC 13795 Query 44730 CACGAAGCTCATTTTCCCCTGAGCCTTCAGGTTATCAACGTAGGCGTCGAACAGGTCGCC 44789 ||||| | ||||| ||||||| | || ||||| ||||||| ||| | Sbjct 13794 CACGATG----GCTTCCCGGCGTCCTTCAGCCACTGCACATAGGCCTCGAACAAGTCAGC 13739 Query 44790 AACGGTGCCCGGCCGGCTGTCACCGCCTGCCACCTTGATCGAGGCACCCTTGTTGATGGC 44849 ||||| || || || | || || | | | |||||| ||||| | ||| Sbjct 13738 CACGGTCCCTGGTCGAGTATCTCC-CAT--TATCTTGATGCTTCGGCCCTTCTGGATCAT 13682 Query 44850 CGTGGAGAAGTCGCGGCCGAACACCTCGCGGGCGCTCGCCAGCGTCATGTGGGGGTAGTC 44909 | || |||||| || | |||||| || ||| |||| ||| || ||| Sbjct 13681 TTCAGCGATGTCGCGCTGAAAGATCTCGCGTGCCGCCGCGAGCGACATCGCCGGATAGGA 13622 Query 44910 GCCCA---TCTTCGAGAGGGTGCGCTTATTGTCGCGCCACTGCTGCGCGTACCACGTC-G 44965 || | ||||| ||| ||||| |||||||||||||||||||| ||| ||| | Sbjct 13621 ACCAAGTTTCTTCTTGAG---TCGCTTGTTGTCGCGCCACTGCTGCGCCATCCA-GTCTG 13566 Query 44966 TCGTGACGCGGGTAGGCATGGGCTTGATGATGAGCACGAGGCGGCCGACGCCGCGCCCTT 45025 || || || || ||||| | ||| | || |||| ||| ||||| ||||||||||| Sbjct 13565 CGGTCACACGCGTGGGCATTGCCTTCAAGACGAGCGTGAGACGGCCAGTGCCGCGCCCTT 13506 Query 45026 CACCATCGGCCAGTGTGGCCTGCTTCCGGCTCTTCTCAACCCGTTTGATAGCGTTCCGGA 45085 | || || || || | || || | | ||| || ||||| || | ||| ||| | | Sbjct 13505 CCCCGTCAAGCAAGGTTTCTTGTTTGCCGGTCTCTTCGACCCGCTTCAAAGCCTTCTGAA 13446 Query 45086 TCT 45088 ||| Sbjct 13445 TCT 13443 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 170521378482840