Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Picea_20abies_20[ConGenIE_20PRJEB1822-1.0_202015-05-12] 10,253,695 sequences; 12,301,475,675 total letters Query= NC_016895.2 Length=31806 Score E Sequences producing significant alignments: (Bits) Value seq416950 740 0.0 seq1393656 233 3e-57 >seq416950 Length=5269 Score = 740 bits (820), Expect = 0.0 Identities = 1627/2412 (67%), Gaps = 57/2412 (2%) Strand=Plus/Plus Query 4644 CAGCTTGTCCCACAGGTTTTTCAGCTGGTCCACGGCAGCTCCATCCAAGTGGTTTCTGTA 4703 ||| || |||||||| | ||| | || |||||||||| ||||||| || | Sbjct 333 CAGTTTATCCCACAGTTCTTTTACATGTTCCACGGCAGTGTCATCCAACATACATCGTTG 392 Query 4704 TTTCTTGGGTTTGGAAACCGCCGGCTGTAGGGGATCAAGCGGTGGGAGTCCACCTCGTGG 4763 |||||||||||||| | | ||| || |||| ||||||| ||| | || Sbjct 393 TTTCTTGGGTTTGGTTGCTTTTCGA-GTAAGGCATCAGGCGGTGGCCGTCTATGTCTACA 451 Query 4764 AGGGTTTTGTCTTTCCACGGCCTCAGCTTGCGAGTGAGGGTGGTCTCCGTGACGGTAAAG 4823 ||||| ||||||||||| ||||||| |||| || | || || || ||||| || || Sbjct 452 AGGGTCTTGTCTTTCCAAGGCCTCACTGTGCGCGTTAAAGTTGTTTCGGTGACTGTGAAC 511 Query 4824 GGCTGCACGTGGGCCTGCACGCTGGCCAGGGTGCGGCGCAGGCTGGTCCGGCTGGTCTGG 4883 || | ||| | || | || ||||| || | || |||||||| || Sbjct 512 GGGGCCGCGTTGCTTTGGTTCGTAGCGAGGGTCCGTTTTAAACTCAGGCGGCTGGTGTGA 571 Query 4884 AAGACATCGGAGCCTTGCTGCAGGTCTGCCAGGTAGCAG---GCCTTGAGGGTGTCATAC 4940 ||| | | || |||||| ||| | || |||||| ||| | |||||||| Sbjct 572 AAGCGCTGGCTCCCCTGCTGCGCGTCAGACAAGTAGCATTTAGCC---AAAGTGTCATAA 628 Query 4941 GAGAGCTCGGAGGTGGCGTGGCCCTTGGCGCGCAGCTTGCCTTTGCCCACGTGACCGCAG 5000 | | || | || || || ||||| || ||||| || ||||| ||||| || || ||| Sbjct 629 CATAATTCAGTAGTTGCATGACCCTTCGCCCGCAGTTTACCTTTACCCACATGCCCACAG 688 Query 5001 CGGGTGCAGACGGTGTTTTTGAGGGCATAGAGCTTGGGCGCCAGGTACACGGACTCGGTG 5060 | || || || |||||||| | ||||| || || || || || | || || || | Sbjct 689 CAAGTACAAACAGTGTTTTTTAAAGCATACAGTTTAGGAGCGAGAAAGACAGATTCAGAA 748 Query 5061 CTGTAGGCGTCCCCTCCGCACTTTTCGCACTGGGTCTCGCACTCCACCAACCAAGTGAGC 5120 || | || || || ||||| ||||| ||||| || || |||||||| || | Sbjct 749 CTAAAAGCATCAGACTTACATTTTTCACACTGAGTCTCACATTCAACCAACCATGTAATA 808 Query 5121 TCGGGGTGGTCTGGGTCAAAAACTAGCTTCCCGCCAttttttttGAGTCTCTTCTTACCT 5180 |||| | ||| ||||||||||||||||| |||||||| || | | | |||||| Sbjct 809 GATGGGTTTTTTGGATCAAAAACTAGCTTCCCTCCATTTTTCTTAATGCGGTGTTTACCT 868 Query 5181 TTTTCCTCCATGAGCCTGTACCCCTCGCGGGTGGTGAAGAGGCTGTCGGTGTCCCCGTAG 5240 ||| ||||||||||| || |||||| ||| || | |||||| |||||||||||| Sbjct 869 CTTTGCTCCATGAGCCGGTGCCCCTCTTCGGTCACAAACAAGCTGTCAGTGTCCCCGTAG 928 Query 5241 ACAGATTTCAAATTTCTCTTCTCCAGGGGGATTCCGGCGTCGTCCGCGTACAGAAACTGG 5300 |||||||| | | || | | | || || |||| ||| || ||||| | ||| | Sbjct 929 ACAGATTTTATAGTTTTTTGATGTAGTGGCTTTCCTCTGTCTTCGGCGTATAAAAATTCT 988 Query 5301 GCCCACTCGGAGACGAAGGCCCGCGTCCACGCGAGAACAAATGACGCGATCTGGGACGGG 5360 |||||||| || || || | | ||||| || | |||||| || || || ||||| | | Sbjct 989 GCCCACTCAGACACAAATACTCTAGTCCAGGCCAAAACAAACGAAGCAATGTGGGAAGCG 1048 Query 5361 TAGCGGTTGTTGGCAATGAGTGGCG--TTGACTTCTCCAGGGTGTGCAAACAAAAGTCAT 5418 || | |||||| | || | || | ||| |||| || |||| || || | ||||| Sbjct 1049 TACCTGTTGTTTTCTATTAAAGGAGAGTTGTTTTCTAAAGTGTGT--AAGCATATGTCAT 1106 Query 5419 CGTCCTCTGCATCTAGAAACGTGATTGGCTTGTAAGTGTATG--ACGTCACGCTAGTGGG 5476 | || || | |||| ||||||||||||||| || | |||| |||| || | | || Sbjct 1107 CATCTTCAGTTTCTAAAAACGTGATTGGCTTATACTTATATGTCACGTGACTATCTTTGG 1166 Query 5477 GGACATAAAAGGGGT-CTCCGGGTGGGGGTCCCCATCATTGGCGACGGCGGTGTGGGTCA 5535 | | | ||| || || ||| || || | |||| | | ||| || Sbjct 1167 GTATAAAAAGGGTGTGCTCTTCGTTTTCATCACTTTCAT---CTAACTCGG-------CA 1216 Query 5536 GCGCCACGCTGGGATCAGGTGGGTACGCTACGACAAATTCTGGCATGATTTCTGCGCACA 5595 | | | || |||||||||| |||||||||||||||||||| ||||| || | | Sbjct 1217 G----AAGGTG----CAGGTGGGTAAGCTACGACAAATTCTGGCATAATTTCAGCACTAA 1268 Query 5596 GGTTGTCTGTTTCTATGTAAGAAGAAGATTTGACCACGAACGCGCCCGTGGAGATG-TCG 5654 |||||| ||||||||| | || |||||||||| || || ||| |||| | Sbjct 1269 AGTTGTCAGTTTCTATGAATGATGAAGATTTGATGGAAAAGTTACCTCTGGCGATGGTTT 1328 Query 5655 TGGGCGGTCTCGGCATCTATTTGGTCAGAAAACACCGTCTTTTTGTTGTCAAGCTTGGTG 5714 | | || || ||| |||| |||||| |||||||| | ||||||||||| | || ||| Sbjct 1329 TTGACGCGCT-GGCTTCTAGTTGGTCTGAAAACACAATTTTTTTGTTGTCCAATTTAGTG 1387 Query 5715 GCGAAGGAGCCGTAGAGGGCGTTGGAGAGCAGCTTGGCTATGCTGCGCATGGTTTGGTTT 5774 || ||| ||| || | ||||||||| || ||||| |||||||| |||||||||||||| Sbjct 1388 GCAAAGCTGCCATATAAGGCGTTGGAAAGTAGCTTAGCTATGCTTCGCATGGTTTGGTTC 1447 Query 5775 TTATTTTTGTCTGCCTGCTCTTTGGCCTGGATGTTTAGCTGCACGTACTCGCGCGCGAGA 5834 || | ||||||||| | |||||||| |||||||||||||||||| || || | Sbjct 1448 TTTTCTTTGTCTGCTTTTTCTTTGGCTCCGATGTTTAGCTGCACGTATTCTTTGGCCACG 1507 Query 5835 CACTTCCACTCGGGGAAGACGGTGGCGCGGGCGTCGGGCACAAAGCGCACCTTCCAGCCT 5894 ||||||||||| ||||||| ||| | | |||| || | || |||||| ||| ||| Sbjct 1508 CACTTCCACTCTGGGAAGATGGTTGTTCTTTCGTCTGGAAGAATGCGCACTGCCCATCCT 1567 Query 5895 CTGTTGTGTAGGGTGATGACGTCAATGGAGGTGGCCACCTCCCCGCGGAGGGGCTCGTTG 5954 |||||||| | || || | ||| || || || || || || || || | |||||||| Sbjct 1568 CTGTTGTGCAAAGTAATCAAGTCTATAGAAGTAGCTACTTCTCCTCGCAAAGGCTCGTTA 1627 Query 5955 GTCCAGCACAGTCTTCCTCCCTTCCGCGAGCAGAAgggggggAGGACATCTAAAAACTCA 6014 ||||||||||| ||||| || || | ||||| || || || || |||| | |||| Sbjct 1628 GTCCAGCACAGCCTTCCGCCTTTTCTGGAGCAAAACGGAGGCAGTTCATCAAGAAACAAC 1687 Query 6015 TCTGCCGGGGGGTCTGCATCTATGGTGAGGATGGCGGGCAGGAG---CTCGGGGTCAAAG 6071 || | || || || || || ||||||| ||| | || || || ||| |||||| Sbjct 1688 TCGTCTGGAGGATCCGCGTCGATGGTGAAAATGCCTGGAAGAAGACACTC---GTCAAAA 1744 Query 6072 TAG-CTGATCTGTGC-CTCCGTTTGCA---TCTTCAACTCGTACCGCCGCACCGCCAGGG 6126 ||| | | | ||| || |||| || | | | | | | | |||| || | || Sbjct 1745 TAGTCAATTTTTTGCTCTAAGTTTTCAAGCTTTCTGATCCATTCTGTCGCA--GCTAAGG 1802 Query 6127 CTCTTTCAAAGGGATTGAGGGGCGGGCCCGC-GGGGAAGGGATGCGTGAGCGCACTGGCA 6185 |||||||| | ||||| | ||| |||||| ||| || |||||||| || ||||||||| Sbjct 1803 CTCTTTCATACGGATTTAAAGGC-TGCCCGCTGGGAAAAGGATGCGTTAGAGCACTGGCA 1861 Query 6186 TACATGCCGCAGATGTCATAGACAAACACGGGCTCGTCCAGCAGTCCGATAAAGGTGGGA 6245 |||||||||||||||||||| ||| | | |||| |||| | || ||| | |||||| Sbjct 1862 TACATGCCGCAGATGTCATACACATAAATTGGCTGTTCCATGATGCCAATATAAGTGGGA 1921 Query 6246 TAACAGCGCCCCCCGCGGATGCTGGCGCGCACATACTCATACATCTCATTGGAAGGGGCC 6305 || ||||| || || |||||||| ||| || || |||||||| |||| || || || Sbjct 1922 TAGCAGCGACCACCACGGATGCTCTGGCGGACGTAGTCATACATTTCATGAGATGGTGCT 1981 Query 6306 AACAGTGTGGTG-CCCAGGTGGCTTTGGTTGGGCTTTTCGGCCCTAAAGAGGATCTGCTT 6364 || | | || | || | ||||| || ||| | | | || | | || ||||| Sbjct 1982 AATAAAACGTTGTCTAAGTTTGCTTT-ATTTGGCCTAACTTCTCTGTATAATATTTGCTT 2040 Query 6365 AAAGAGGGCGTGTGAGTTGGAGCTAATGGTAGGCCGCTGAAATACATTGAAGGACGCCTC 6424 ||| | || || ||||| |||||||| || || | ||||| | || || || || || Sbjct 2041 AAAAATTGCATGAGAGTTAGAGCTAATAGTGGGTCTTTGAAAAATGTTAAATGAAGCATC 2100 Query 6425 AGGTAAGTTCACCGACTCCGCGACAAAGGCCTGGTATGCTTCTGTGAGCTTCAAGACTAG 6484 |||||||||||| || | |||| | ||| | |||| ||| || ||||| Sbjct 2101 AGGTAAGTTCACTTGAGAAGCAATAAAGTTTTTGTAAGATTCTTGGAGTTTGTTTACTAG 2160 Query 6485 CTGAGTGGTAACCTTTACATCCTGGGCGCAGTAGTCAAGGGTGCTTTGAATGATGTCGTA 6544 | || || || || || | || |||| || || || || |||||||| Sbjct 2161 GGCCGATGTCACTAACACGTCTTGCACACAATAGTGCAGCGTTTGCTGGATTATGTCGTA 2220 Query 6545 AGCGTCCtttttttCTTCCCTCCACAGCTGCTTGTTGAAGCGGTACTCCTCG--GCATCC 6602 ||| || |||| ||| |||||||| |||||||| | ||||| ||| | || Sbjct 2221 AGCCCCCACGTTTTTTTCTCTCCACAGAGCCTTGTTGAGTTGATACTCTTCGCTGGAT-- 2278 Query 6603 TTCCAGTAGTCTTCCGC-GGGAAAGCCATCGGCATCTCGCCGGTAAGTACCCAGCATGTA 6661 |||||||| |||| || ||||||||||| ||||| | |||||| || | | || Sbjct 2279 TTCCAGTA-TCTTAGGCTTGGAAAGCCATCCTCATCTTGTTGGTAAGACCCTATTCTATA 2337 Query 6662 AAATTCATTCACGGCCTGGTAGGGACAGCACCCTTTTGACACCGGCAGGTTGTATGCTTT 6721 |||||||| || || | ||| ||||||| |||||| || ||||| | ||| || Sbjct 2338 GAATTCATTTACTGCTTCGTACGGACAGCTTCCTTTTTCTACAGGCAGCTCGTAAGCCCC 2397 Query 6722 GGCAGCGTTTCGCAGGCTGGTGTGTGTCAGGGTGAAAGTGTCGCGCACCATAAACTTGAT 6781 ||||| |||| | ||| ||||| ||||| | |||||||| | |||||||| || | Sbjct 2398 AGCAGCATTTCTTAAGCTAGTGTGGGTCAGCGCAAAAGTGTCTCTTACCATAAATTTAAC 2457 Query 6782 GAACTGGTTTCTGAGGTCACAGGCCAGCAGCTGGCCTTTTTCCCAGTCGGTGTAGTCTTT 6841 ||||||| || |||| ||| |||| || ||||| |||| | | ||||| Sbjct 2458 AAACTGGTACTTGTGGTCCGCGGCTGTGAGCTTTCCACACTCCCAATCGGCGAAATCTTT 2517 Query 6842 TCTTGGAAAGTAAGCGGGGTTGGGCAGGGCGTAGGTGACATCATTAAAAAGCAGCCTGCC 6901 || | ||| || || || | | | | | ||||| || || | | || Sbjct 2518 TCGTTTTTCGTACTTTGGATTAGGTAAGCAAAAAGAAATGTCATTGAACAGTATTTTACC 2577 Query 6902 GGCGCGTGGCATAAAGTTCCTAGAAATTTGAAAGGCGGGCGGAATTTCCGCCCGTGTGCT 6961 | | ||||||||| || ||| |||| || || ||| ||| |||| | || Sbjct 2578 GTTTCTTGGCATAAAATTTCTATTTATTTTGAAAGCAGGCAGAACATCCGTTCTGTTGTG 2637 Query 6962 CACCACCTGCGCGGCCAGCAAAATTTCATCAAACCCCGTGATGTTGTGCCCCACCACGTA 7021 | || |||||||||| || || |||||||| || ||||||||| || | || || Sbjct 2638 TATGACTTGCGCGGCCAACACGATCTCATCAAAACCGCAGATGTTGTGGCCAATTACATA 2697 Query 7022 GACCTCAATGAA 7033 | ||||| || Sbjct 2698 AATTTCAATAAA 2709 Score = 237 bits (262), Expect = 3e-58 Identities = 400/577 (69%), Gaps = 4/577 (1%) Strand=Plus/Plus Query 8015 ATGACCCGGCGGTTGATGGTCTGAATTTG--GTTGTTCTGGGAAAAGACGACGGGCCCCG 8072 || || | |||||||||| ||||||| | | | | |||||| || || || || | Sbjct 3682 ATAACTCTGCGGTTGATGTTCTGAATCTCCCGCAGGCC--GGAAAATACCACTGGGCCGG 3739 Query 8073 TCATTTTGAACCTAAAAGACAGTTCCATAGAATCAATTTCTGTATCATTGACGGCCACCT 8132 ||| | ||||||| ||||| | ||||||||| ||||| |||| ||||| || ||||| | Sbjct 3740 TCACTCTGAACCTGAAAGATATTTCCATAGAGTCAATGTCTGCGTCATTAACTGCCACTT 3799 Query 8133 GCCTGAGGATCTCCCCCACGTCCCCGCTGTTGTCATGGTAGGCGATGTCCGCCATGAACT 8192 || | | ||||| | |||||| |||||||| || || || || || || ||||| |||| Sbjct 3800 GCTTTAAAATCTCACTCACGTCTCCGCTGTTATCGTGATAAGCTATTTCTGCCATAAACT 3859 Query 8193 GCTCTATCTCATCCTCCTCCAACTCGCCCATCCCCGCCCGCTCGACGGTGGCCGAGAGAT 8252 |||| ||||| |||| ||| ||||| || |||| || | ||| || ||||| | | | Sbjct 3860 GCTCAATCTCTTCCTGCTCTAACTCTCCTCTCCCTGCTCTCTCAACTGTGGCAGCCAAGT 3919 Query 8253 CCCCCGAGACGCGCTCCATGACCTGGGTGAAAGCATTTTCCCCCATCTCGTTCCACACCC 8312 | | ||| ||||| | | ||||| | |||||| | || |||||||| | Sbjct 3920 CAATGCTAATGCGAGACATGATGTTACTAAAAGCCTGTTCCCCATTTTCATTCCACACTC 3979 Query 8313 GGCTGTAGACCACCTGCCCCTCTGCGTCCCTGGCACGCATGACCACCTGCGCTAGCTCTA 8372 |||||| || | || || ||| ||| ||||| | ||| || |||||||| || | | Sbjct 3980 TGCTGTACACAATTTGTCCATCTTCGTTTCTGGCTCTCATTACTACCTGCGCCAGATTAA 4039 Query 8373 GGTCTACCCATCGGGAACAgggggggTAGAGGCGGAGGTTATGGTGGAGGTAGTTGAGGG 8432 | || ||| | | |||| | | | | | || | | |||||| || | Sbjct 4040 GCATCACATATCTCCCAAAAGGGGAAGATACCCTAATTTGGTGATTTAAGTAGTTTAGTG 4099 Query 8433 TGGTGGCGATGTGCTCGGCCACAAAGAAATACATGACCCATCGGCGGATGGTGAGCTCGT 8492 |||| || ||||| || |||||||| || |||| ||||| || ||| || || | Sbjct 4100 TGGTAGCAATGTGTTCTGCCACAAAAAAGAACATCACCCAGCGTTGGAGAGTTGTTTCAT 4159 Query 8493 TGATATTGCCCAGCATCTCGAGGCGCTGCATGACCTCGTAAAAGTCCACGGCAAAGTTAA 8552 | || | || ||| ||| | ||||| || ||||| ||||| | || |||||||||| Sbjct 4160 TAATGTCACCTAGCGCCTCCAAACGCTGAATAACCTCATAAAAATTTACAGCAAAGTTAA 4219 Query 8553 AAAATTGCTCGTTGCGGGCAGAAACGGTGAGCTCTTC 8589 |||| |||| ||| | ||||| || ||||||||||| Sbjct 4220 AAAACTGCTGGTTTCTAGCAGACACAGTGAGCTCTTC 4256 >seq1393656 Length=1543 Score = 233 bits (258), Expect = 3e-57 Identities = 374/537 (70%), Gaps = 0/537 (0%) Strand=Plus/Plus Query 8053 GGAAAAGACGACGGGCCCCGTCATTTTGAACCTAAAAGACAGTTCCATAGAATCAATTTC 8112 |||||| || || || || |||| | ||||||| ||||| | ||||||||| ||||| || Sbjct 28 GGAAAATACCACTGGGCCGGTCACTCTGAACCTGAAAGATATTTCCATAGAGTCAATGTC 87 Query 8113 TGTATCATTGACGGCCACCTGCCTGAGGATCTCCCCCACGTCCCCGCTGTTGTCATGGTA 8172 || ||||| || ||||| ||| | | ||||| | |||||| |||||||| || || || Sbjct 88 TGCGTCATTAACTGCCACTTGCTTTAAAATCTCACTCACGTCTCCGCTGTTATCGTGATA 147 Query 8173 GGCGATGTCCGCCATGAACTGCTCTATCTCATCCTCCTCCAACTCGCCCATCCCCGCCCG 8232 || || || ||||| |||||||| ||||| |||| ||| ||||| || |||| || | Sbjct 148 AGCTATTTCTGCCATAAACTGCTCAATCTCTTCCTGCTCTAACTCTCCTCTCCCTGCTCT 207 Query 8233 CTCGACGGTGGCCGAGAGATCCCCCGAGACGCGCTCCATGACCTGGGTGAAAGCATTTTC 8292 ||| || ||||| | | || | ||| ||||| | | ||||| | ||| Sbjct 208 CTCAACTGTGGCAGCCAAGTCAATGCTAATGCGAGACATGATGTTACTAAAAGCCTGTTC 267 Query 8293 CCCCATCTCGTTCCACACCCGGCTGTAGACCACCTGCCCCTCTGCGTCCCTGGCACGCAT 8352 ||| | || |||||||| | |||||| || | || || ||| ||| ||||| | ||| Sbjct 268 CCCATTTTCATTCCACACTCTGCTGTACACAATTTGTCCATCTTCGTTTCTGGCTCTCAT 327 Query 8353 GACCACCTGCGCTAGCTCTAGGTCTACCCATCGGGAACAgggggggTAGAGGCGGAGGTT 8412 || |||||||| || | || || ||| | | |||| | | | | | Sbjct 328 TACTACCTGCGCCAGATTAAGCATCACATATCTCCCAAAAGGGGAAGATACCCTAATTTG 387 Query 8413 ATGGTGGAGGTAGTTGAGGGTGGTGGCGATGTGCTCGGCCACAAAGAAATACATGACCCA 8472 || | | |||||| || ||||| || ||||| || |||||||| || |||| ||||| Sbjct 388 GTGATTTAAGTAGTTTAGTGTGGTAGCAATGTGTTCTGCCACAAAAAAGAACATCACCCA 447 Query 8473 TCGGCGGATGGTGAGCTCGTTGATATTGCCCAGCATCTCGAGGCGCTGCATGACCTCGTA 8532 || ||| || || || || | || ||| ||| | ||||| || ||||| || Sbjct 448 GCGTTGGAGAGTTGTTTCATTAATGTCACCTAGCGCCTCCAAACGCTGAATAACCTCATA 507 Query 8533 AAAGTCCACGGCAAAGTTAAAAAATTGCTCGTTGCGGGCAGAAACGGTGAGCTCTTC 8589 ||| | || |||||||||||||| |||| ||| | ||||| || ||||||||||| Sbjct 508 AAAATTTACAGCAAAGTTAAAAAACTGCTGGTTTCTAGCAGACACAGTGAGCTCTTC 564 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 89608063451165