Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Picea_20abies_20[ConGenIE_20PRJEB1822-1.0_202015-05-12] 10,253,695 sequences; 12,301,475,675 total letters Query= NC_017981.1 Length=49981 Score E Sequences producing significant alignments: (Bits) Value seq5899 111 4e-20 >seq5899 Length=58143 Score = 111 bits (122), Expect = 4e-20 Identities = 196/283 (69%), Gaps = 6/283 (2%) Strand=Plus/Minus Query 25993 TAGCGCTCAACGCCGTCCTTTTCC---CACTTGCGGGTTTTCAGTTGCCCCTCAATGTAA 26049 ||||| || ||||||||| ||| || ||||| || | || || ||||| |||||| Sbjct 28743 TAGCGATCCTTGCCGTCCTTGTCCTGCCATTTGCGAGTCTGGAGCTGGCCCTCGATGTAA 28684 Query 26050 ACCTGTGAACCTTTCTTCAGGTACTCGCCCGCGATCT--CCGCTACCTT-GCCAAACAGC 26106 |||| || || |||||||| |||| | || |||| | ||||| || || | | Sbjct 28683 ACCTTGGAGCCCTTCTTCAGATACTGCTCGGCAATCTTGCAAAGACCTTCGCTGAAGATC 28624 Query 26107 ACGACGCGATGCCATTCTGTCACTTCTTTCTTTTCGCCGGTCTGCTTATCGTTCCAGCTT 26166 ||||| ||||||||||| ||| ||||||| ||||||| | ||| ||| |||| | Sbjct 28623 ACGACACGATGCCATTCCGTCTTTTCTTTCCGCTCGCCGGAATTCTTGTCGCGCCAGGTA 28564 Query 26167 TCTGAGGTCGCTACGGTAATGTTGGCGACTGCGCCGCCATTAGGCATGTAACGGATCTCT 26226 || |||||||| | | | | || |||| | || ||| | || || ||| || Sbjct 28563 TCCGAGGTCGCGATGCTCAGATTCGCGATCGGGCGGCCGTCCTGCGTGCGCTTGATTTCA 28504 Query 26227 GGATCGTTCCCCAGGTTACCGACAAGGATTACTTTATTTACGC 26269 || ||| || ||||| || || || || |||||||| |||| Sbjct 28503 GGGTCGGCGCCGAGGTTTCCAACCAGAATGACTTTATTGACGC 28461 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 140357789003370