Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Picea_20abies_20[ConGenIE_20PRJEB1822-1.0_202015-05-12] 10,253,695 sequences; 12,301,475,675 total letters Query= NC_018452.1 Length=61847 Score E Sequences producing significant alignments: (Bits) Value seq5899 100 1e-16 seq3673 84.2 8e-12 >seq5899 Length=58143 Score = 100 bits (110), Expect = 1e-16 Identities = 203/298 (68%), Gaps = 5/298 (2%) Strand=Plus/Plus Query 9972 CGTCAACAAAGTCATCCTCGTCGGCAATCTCGGCGCCGACCCGGAAACCC-GCTACCTCC 10030 |||||| |||||||| || || || || |||||||||||||| |||| | || | | Sbjct 28462 CGTCAATAAAGTCATTCTGGTTGGAAACCTCGGCGCCGACCCTGAAATCAAGCGCACGCA 28521 Query 10031 CGAGCGGCGACGCAATCTCCAACATCCGCCTCGCTACGACCGATCGCTACAAGGACAAGG 10090 || |||| | | ||| | || | || |||| || | ||| || |||||| Sbjct 28522 GGA-CGGCCGCCCGATCGCGAATCTGAGCATCGCGACCTCGGATACCTGGCGCGACAAGA 28580 Query 10091 CGAGCGGCGAGATGAAGGAATCGACCGAATGGCACCGCGTCAGCTTCTTCGGCC---GCC 10147 ||||||| ||| ||| ||| |||||||| || ||| ||||| || | | Sbjct 28581 ATTCCGGCGAGCGGAAAGAAAAGACGGAATGGCATCGTGTCGTGATCTTCAGCGAAGGTC 28640 Query 10148 TCGCCGAGATCGTCGACGAGTACCTGCGCAAGGGCGCGCCGGTCTACATCGAGGGCCGCA 10207 | | |||| | ||| |||| ||| |||||| | ||| ||||||||||||| Sbjct 28641 TTTGCAAGATTGCCGAGCAGTATCTGAAGAAGGGCTCCAAGGTTTACATCGAGGGCCAGC 28700 Query 10208 TCCGCACGCGGAAGTGGCAGGATAACGCCGGCCAGGATCGCTACACGACCGAGATCGT 10265 ||| || || || |||||||| || | |||| |||||||||| ||||||| |||| Sbjct 28701 TCCAGACTCGCAAATGGCAGGACAAGGACGGCAAGGATCGCTATTCGACCGAAGTCGT 28758 >seq3673 Length=65547 Score = 84.2 bits (92), Expect = 8e-12 Identities = 75/94 (80%), Gaps = 0/94 (0%) Strand=Plus/Minus Query 8258 ACATGGAGGCGTGGCAGAGTGGTCTAATGCAGCGGATTTGAAATCCGTCATACGTGCGAG 8317 || ||||| |||||||||||||| |||||| || | | ||||| || |||| |||| || Sbjct 33901 ACCTGGAGAGGTGGCAGAGTGGTCGAATGCACCGCACTCGAAATGCGGCATAGGTGCAAG 33842 Query 8318 CGTATCGTGAGTTCGAATCTCACCGCCTCCGCCA 8351 | ||||| | ||||||||| | || |||||||| Sbjct 33841 CCTATCGGGGGTTCGAATCCCTCCCTCTCCGCCA 33808 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 173705515898310