Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Picea_20abies_20[ConGenIE_20PRJEB1822-1.0_202015-05-12] 10,253,695 sequences; 12,301,475,675 total letters Query= NC_019406.1 Length=279967 Score E Sequences producing significant alignments: (Bits) Value seq181 116 6e-21 seq1827652 84.2 3e-11 seq16097 84.2 3e-11 >seq181 Length=116846 Score = 116 bits (128), Expect = 6e-21 Identities = 152/208 (73%), Gaps = 2/208 (1%) Strand=Plus/Minus Query 191906 CCCGATCCGGTCGACATCCATGTGGGCAAGCGCATCCGCATGCGTCGCAAGACTCTCGGC 191965 ||| |||| || |||| |||| |||| ||| | |||||||| || | | || ||| Sbjct 65809 CCCAATCCTGTTGACAAATATGTTGGCAGCCGCGTGCGCATGCGCCGGATCATGCTTGGC 65750 Query 191966 GTCAGCCAGGAACAACTCGCCAGCGCGCTGGGTCTGACCTTCCAGCAGGTGCAGAAGTAC 192025 | ||||||||| | |||| | ||||| || ||||| || |||||||||||||| ||| Sbjct 65749 ATGAGCCAGGAAAAGCTCGGCGAAGCGCTCGGCCTGACATTTCAGCAGGTGCAGAAATAC 65690 Query 192026 GAGAAGGGCGGCAATCGCGTCAGCGCGAGCAAGCTGCACGGCATCGGC-AAATTCCTGGG 192084 ||||||||| ||| ||| || | |||||| |||||| ||| | | |||| | | Sbjct 65689 GAGAAGGGCACCAACCGCATCGGTGCGAGCCGGCTGCAACAGATCTCCGACATTCTTCAG 65630 Query 192085 CGTTCCGGTCGCCTTTTTCTTCGAAGGC 192112 || |||||| | ||||| || |||||| Sbjct 65629 -GTGCCGGTCTCGTTTTTGTTTGAAGGC 65603 Score = 98.7 bits (108), Expect = 2e-15 Identities = 149/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 110998 GCGAAGACGGCCTGGGCAATGCGGTCGCCGCGATTGATGACGAACGGATTGCGGCCGTGG 111057 |||| ||| ||| || ||||| || ||||| ||| ||| || | | |||||| Sbjct 34615 GCGATGACAAGCTGTGCGATGCGTTCACCGCGGCGGATCGTGAATGGCTCGTCGCCGTGA 34674 Query 111058 TTGATCAGGATCACCTTGATCTCGCCGCGATAGTCGCTGTCGACGGTACCGGGCGAATTC 111117 ||||||| | ||| | ||||||||||||||| ||||||||| || |||||||| Sbjct 34675 TTGATCAAAAGCACAGAAACTTCGCCGCGATAGTCGGCGTCGACGGTTCCCGGCGAATTG 34734 Query 111118 AGGACAGTGATAGACGACTTGGCGGCGAGGCCCGAGCGCGGCCGGACTTGCAGTTCCAGG 111177 ||||| || | |||| ||||||||| ||||| ||||| || ||| || || Sbjct 34735 AGGACGGTCACGCCATGCTTGAAGGCGAGGCCGGAGCGGGGCCGCACCTGCGCCTCATGG 34794 Query 111178 CCCGCCGGCAGGGCGACCGTGACGCCGGTCGG 111209 |||| ||| | |||| | ||| || ||||| Sbjct 34795 CCCGGCGGAACCGCGATCATGAGTCCCGTCGG 34826 >seq1827652 Length=1103 Score = 84.2 bits (92), Expect = 3e-11 Identities = 64/76 (84%), Gaps = 0/76 (0%) Strand=Plus/Plus Query 132963 GCGGGGTGGAGCAGTCCGGTAGCTCGTTTGGCTCATAACCAAAAGGTCGAGGGTTCAAAT 133022 |||||||||||||| |||||||||||| ||||||||||| |||||| ||||||||| Sbjct 877 GCGGGGTGGAGCAGCCCGGTAGCTCGTCAGGCTCATAACCTGAAGGTCACAGGTTCAAAT 936 Query 133023 CCCTCCCCCGCATCCA 133038 || ||||||| ||| Sbjct 937 CCTGTCCCCGCAACCA 952 >seq16097 Length=42722 Score = 84.2 bits (92), Expect = 3e-11 Identities = 64/76 (84%), Gaps = 0/76 (0%) Strand=Plus/Minus Query 132963 GCGGGGTGGAGCAGTCCGGTAGCTCGTTTGGCTCATAACCAAAAGGTCGAGGGTTCAAAT 133022 |||||||||||||| |||||||||||| ||||||||||| |||||| ||||||||| Sbjct 31089 GCGGGGTGGAGCAGCCCGGTAGCTCGTCAGGCTCATAACCTGAAGGTCATAGGTTCAAAT 31030 Query 133023 CCCTCCCCCGCATCCA 133038 || ||||||| ||| Sbjct 31029 CCTATCCCCGCAACCA 31014 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 780954956789400