Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Picea_20abies_20[ConGenIE_20PRJEB1822-1.0_202015-05-12] 10,253,695 sequences; 12,301,475,675 total letters Query= NC_019711.1 Length=47288 Score E Sequences producing significant alignments: (Bits) Value seq1966556 470 4e-128 seq248305 450 4e-122 seq1600686 91.5 4e-14 seq1234673 91.5 4e-14 seq595170 91.5 4e-14 seq537025 86.0 2e-12 >seq1966556 Length=1002 Score = 470 bits (520), Expect = 4e-128 Identities = 262/263 (99%), Gaps = 0/263 (0%) Strand=Plus/Minus Query 27292 AGCTTTGCACTGGATTGCGAGGCTTTGTGCTTCTCTGGAGTGCGACAGGTTTGATGACAA 27351 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 546 AGCTTTGCACTGGATTGCGAGGCTTTGTGCTTCTCTGGAGTGCGACAGGTTTGATGACAA 487 Query 27352 AAAATTAGCGCAAGAAGACAAAAATCACCTTGCGCTAATGCTCTGTTACAGGTCACTAAT 27411 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 486 AAAATTAGCGCAAGAAGACAAAAATCACCTTGCGCTAATGCTCTGTTACAGGTCACTAAT 427 Query 27412 ACCATCTAAGTAGTTGATTCATAGTGACTGCATATGTTGTGTTTTACAGTATTATGTAGT 27471 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 426 ACCATCTAAGTAGTTGATTCATAGTGACTGCATATGTTGTGTTTTACAGTATTATGTAGT 367 Query 27472 CTGTTTTTTATGCAAAATCTAATTTAATATATTGATATTTATATCATTTTACGTTTCTCG 27531 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 366 CTGTTTTTTATGCAAAATCTAATTTAATATATTGATATTTATATCATTTTACGTTTCTCG 307 Query 27532 TTCAGCTTTTTTATACTAAGTTG 27554 ||||||||||||||||||| ||| Sbjct 306 TTCAGCTTTTTTATACTAACTTG 284 >seq248305 Length=8731 Score = 450 bits (498), Expect = 4e-122 Identities = 249/249 (100%), Gaps = 0/249 (0%) Strand=Plus/Plus Query 21072 TGGCCATCAGATATCGTTCCGTCTGGCTACGTCCTGATGCAGGGGCAGGCGTTTGACAAA 21131 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 8479 TGGCCATCAGATATCGTTCCGTCTGGCTACGTCCTGATGCAGGGGCAGGCGTTTGACAAA 8538 Query 21132 TCAGCCTACCCAAAACTTGCTGTCGCGTATCCATCGGGTGTGCTTCCTGATATGCGAGGC 21191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 8539 TCAGCCTACCCAAAACTTGCTGTCGCGTATCCATCGGGTGTGCTTCCTGATATGCGAGGC 8598 Query 21192 TGGACAATCAAGGGGAAACCCGCCAGCGGTCGTGCTGTATTGTCTCAGGAACAGGATGGA 21251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 8599 TGGACAATCAAGGGGAAACCCGCCAGCGGTCGTGCTGTATTGTCTCAGGAACAGGATGGA 8658 Query 21252 ATTAAGTCGCACACCCACAGTGCCAGTGCATCCGGTACGGATTTGGGGACGAAAACCACA 21311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 8659 ATTAAGTCGCACACCCACAGTGCCAGTGCATCCGGTACGGATTTGGGGACGAAAACCACA 8718 Query 21312 TCGTCGTTT 21320 ||||||||| Sbjct 8719 TCGTCGTTT 8727 >seq1600686 Length=1301 Score = 91.5 bits (100), Expect = 4e-14 Identities = 50/50 (100%), Gaps = 0/50 (0%) Strand=Plus/Plus Query 47168 CGTCATAACTTAATGTTTTTATTTAAAATACCCTCTGAAAAGAAAGGAAA 47217 |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1209 CGTCATAACTTAATGTTTTTATTTAAAATACCCTCTGAAAAGAAAGGAAA 1258 >seq1234673 Length=1771 Score = 91.5 bits (100), Expect = 4e-14 Identities = 50/50 (100%), Gaps = 0/50 (0%) Strand=Plus/Plus Query 47126 ATTTATGAAAATTTTCCGGTTTAAGGCGTTTCCGTTCTTCTTCGTCATAA 47175 |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1722 ATTTATGAAAATTTTCCGGTTTAAGGCGTTTCCGTTCTTCTTCGTCATAA 1771 >seq595170 Length=3628 Score = 91.5 bits (100), Expect = 4e-14 Identities = 55/58 (95%), Gaps = 0/58 (0%) Strand=Plus/Plus Query 46881 GTTCTGTTCTTCGTTGACATGAGGTTGCCCCGTATTCAGTGTCGCTGATTTGTATTGT 46938 ||||||||||| |||||||||||||||||||||||||||||||||||||| || |||| Sbjct 2886 GTTCTGTTCTTAGTTGACATGAGGTTGCCCCGTATTCAGTGTCGCTGATTAGTTTTGT 2943 >seq537025 Length=4031 Score = 86.0 bits (94), Expect = 2e-12 Identities = 49/50 (98%), Gaps = 0/50 (0%) Strand=Plus/Minus Query 45975 AGAATAAAACAATTCACAGTCTAAATCTTTTCGCACTTGATCGAATATTT 46024 |||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct 78 AGAATAAAACAATTCACAGTTTAAATCTTTTCGCACTTGATCGAATATTT 29 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 132789490627500