Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Picea_20abies_20[ConGenIE_20PRJEB1822-1.0_202015-05-12] 10,253,695 sequences; 12,301,475,675 total letters Query= NC_019768.1 Length=41468 Score E Sequences producing significant alignments: (Bits) Value seq1966556 324 3e-84 >seq1966556 Length=1002 Score = 324 bits (358), Expect = 3e-84 Identities = 231/264 (88%), Gaps = 1/264 (0%) Strand=Plus/Minus Query 21167 AGCTTTGCACTGGACTGCAAGGTGTTGTGCTTCTCTGGAGTGCGATATGTTTGATGACAA 21226 |||||||||||||| ||| ||| ||||||||||||||||||||| | |||||||||||| Sbjct 546 AGCTTTGCACTGGATTGCGAGGCTTTGTGCTTCTCTGGAGTGCGACAGGTTTGATGACAA 487 Query 21227 AAAATTAGCGCAAGAGGACAACAAATCACCTTGCGCTAATGCTCTGCTACAGGTCACTAA 21286 ||||||||||||||| ||||| |||||||||||||||||||||||| ||||||||||||| Sbjct 486 AAAATTAGCGCAAGAAGACAA-AAATCACCTTGCGCTAATGCTCTGTTACAGGTCACTAA 428 Query 21287 TACTATCTAAGTAGTTGATTCATAGTGACTGGATATGTTGTGTTTTGTCGCATTATGTAG 21346 ||| ||||||||||||||||||||||||||| |||||||||||||| | ||||||||| Sbjct 427 TACCATCTAAGTAGTTGATTCATAGTGACTGCATATGTTGTGTTTTACAGTATTATGTAG 368 Query 21347 TCTATTTTTTAGACTAAATATATTGTAATGCATTGATATTAATGGTTTTTAATGTTTCAC 21406 ||| ||||||| | |||| || | |||| ||||||||| || ||| | ||||| | Sbjct 367 TCTGTTTTTTATGCAAAATCTAATTTAATATATTGATATTTATATCATTTTACGTTTCTC 308 Query 21407 GTTCAGCTTTTTTATACTAAGTTG 21430 |||||||||||||||||||| ||| Sbjct 307 GTTCAGCTTTTTTATACTAACTTG 284 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 116433197813700