Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Picea_20abies_20[ConGenIE_20PRJEB1822-1.0_202015-05-12] 10,253,695 sequences; 12,301,475,675 total letters Query= NC_019929.1 Length=243050 Score E Sequences producing significant alignments: (Bits) Value seq94137 143 4e-29 seq10253695 91.5 2e-13 seq10253694 91.5 2e-13 seq214442 91.5 2e-13 seq3 86.0 8e-12 >seq94137 Length=18398 Score = 143 bits (158), Expect = 4e-29 Identities = 185/254 (73%), Gaps = 1/254 (0%) Strand=Plus/Minus Query 122406 GGCACGAAAAAG-CAGACCGTACGGGCACGGGCACCCTGTCGTTATTCGGCGCACAAATG 122464 ||| || ||||| | ||||| || ||||| || || |||||| | |||||| || ||| Sbjct 9017 GGCGCGGAAAAGACCGACCGCACCGGCACCGGGACACTGTCGATCTTCGGCCATCAGATG 8958 Query 122465 CGCTTTGACCTGCAAAAAGGTTTCCCGCTGGTCACGACCAAAAAGGTTCACCTCCGCTCC 122524 || || | ||| | |||||||||||| | || ||||| ||| |||| || || Sbjct 8957 CGGTTCAATCTGGCATCGGGTTTCCCGCTGCTGACAACCAAGAAGCTTCATCTGAAGTCG 8898 Query 122525 ATCATCCATGAGCTTCTGTGGTTCCTCATGGGCGATACCAACATCCAGTATCTGAAAGAC 122584 ||| |||| || || |||||||| || ||| || ||||||||| | || ||||| ||| Sbjct 8897 ATCGTCCACGAACTGCTGTGGTTTCTGGCGGGTGACACCAACATCAAATACCTGAACGAC 8838 Query 122585 AACAACGTCAGTATCTGGGATGAATGGGCAGATGAAGATGGTAATCTCGGCCCGGTGTAC 122644 ||| ||| | || ||||| || ||||| || || | || |||||||||||||| || Sbjct 8837 AACGGCGTTCGCATTTGGGACGAGTGGGCTGACGAGAACGGCAATCTCGGCCCGGTCTAT 8778 Query 122645 GGTAAGCAATGGCG 122658 || ||| ||||| Sbjct 8777 GGCTCGCAGTGGCG 8764 >seq10253695 Length=124084 Score = 91.5 bits (100), Expect = 2e-13 Identities = 66/75 (88%), Gaps = 1/75 (1%) Strand=Plus/Plus Query 169725 TTAGGATTGTAGCTCAGTTGGTCTAGAGTGCCGCCCTGTCACGGCGGAGGTCGCGGGTTC 169784 || ||||||||| ||| ||||| |||||| ||||||||||| | |||| || |||||||| Sbjct 33287 TTGGGATTGTAGTTCAATTGGT-TAGAGTACCGCCCTGTCAAGACGGAAGTTGCGGGTTC 33345 Query 169785 GAGCCCCGTCAGTCC 169799 ||||||||||||||| Sbjct 33346 GAGCCCCGTCAGTCC 33360 >seq10253694 Length=124084 Score = 91.5 bits (100), Expect = 2e-13 Identities = 66/75 (88%), Gaps = 1/75 (1%) Strand=Plus/Plus Query 169725 TTAGGATTGTAGCTCAGTTGGTCTAGAGTGCCGCCCTGTCACGGCGGAGGTCGCGGGTTC 169784 || ||||||||| ||| ||||| |||||| ||||||||||| | |||| || |||||||| Sbjct 33287 TTGGGATTGTAGTTCAATTGGT-TAGAGTACCGCCCTGTCAAGACGGAAGTTGCGGGTTC 33345 Query 169785 GAGCCCCGTCAGTCC 169799 ||||||||||||||| Sbjct 33346 GAGCCCCGTCAGTCC 33360 >seq214442 Length=9799 Score = 91.5 bits (100), Expect = 2e-13 Identities = 58/62 (94%), Gaps = 1/62 (2%) Strand=Plus/Plus Query 169733 GTAGCTCAGTTGGTCTAGAGTGCCGCCCTGTCACGGCGGAGGTCGCGGGTTCGAGCCCCG 169792 |||||||||||||| ||||| |||| ||||||||| |||||||||||||||||||||||| Sbjct 5286 GTAGCTCAGTTGGT-TAGAGCGCCGGCCTGTCACGCCGGAGGTCGCGGGTTCGAGCCCCG 5344 Query 169793 TC 169794 || Sbjct 5345 TC 5346 >seq3 Length=194057 Score = 86.0 bits (94), Expect = 8e-12 Identities = 70/85 (82%), Gaps = 0/85 (0%) Strand=Plus/Plus Query 167025 AGGGGCATAGCTCAGCTGGCAGAGCACCGGTCTCCAAAACCGGGTGTCCAAGGTTCGAAT 167084 ||||| |||||||| ||| |||||| ||||||||||||||| | ||| |||||||| | Sbjct 63611 AGGGGTGTAGCTCAGTTGGTAGAGCATCGGTCTCCAAAACCGAGGGTCGCAGGTTCGAGT 63670 Query 167085 CCTTGTGCCCCTGCCAAATTTAGCC 167109 ||| |||||||||| |||| ||| Sbjct 63671 CCTGCCGCCCCTGCCAGATTTGGCC 63695 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 677961983122000