Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Picea_20abies_20[ConGenIE_20PRJEB1822-1.0_202015-05-12] 10,253,695 sequences; 12,301,475,675 total letters Query= NC_019945.1 Length=132978 Score E Sequences producing significant alignments: (Bits) Value seq7247255 100 2e-16 seq20028 98.7 7e-16 seq121729 93.3 3e-14 seq1049907 89.7 4e-13 seq20237 89.7 4e-13 seq73042 87.8 1e-12 seq59979 84.2 2e-11 seq353026 82.4 6e-11 >seq7247255 Length=252 Score = 100 bits (110), Expect = 2e-16 Identities = 144/203 (71%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 28554 ATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTCA 28613 |||||||| ||||| ||||| | ||||| || ||||| || |||| || || Sbjct 1 ATGCAAATCTTTGTGAAAACCCTGACGGGCAAGACCATCACGCTCGAAGTTGAGAGCTCC 60 Query 28614 GAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCAA 28673 || ||| | | || | ||| ||| ||| ||||| ||||| | || ||||| Sbjct 61 GATACGATTGATAATGTGAAGGCAAAGATCCAGGACAAGGAGGGGATTCCTCCGGATCAG 120 Query 28674 CAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAC 28733 |||||| | |||||||| || |||||| | |||||| | ||| |||| || |||||| Sbjct 121 CAGAGATTGATCTTTGCAGGGAAACAACTTGAAGATGGGAGGACTTTGGCGGACTATAAC 180 Query 28734 ATTCAAAAAGAATCTACTCTGCA 28756 ||||| ||||| ||||| ||||| Sbjct 181 ATTCAGAAAGAGTCTACCCTGCA 203 >seq20028 Length=39891 Score = 98.7 bits (108), Expect = 7e-16 Identities = 147/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 28554 ATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTCA 28613 ||||| || ||||| ||||| | || ||||||||||||||| || || ||| Sbjct 30215 ATGCAGATCTTTGTGAAAACCCTGACCGGTAAAACCATTACCCTGGAGGTTGAGAGCTCA 30156 Query 28614 GAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCAA 28673 || || | | || | ||| || ||| ||||| ||||| | || || ||| Sbjct 30155 GACACCATTGATAATGTGAAGACCAAGATCCAGGACAAGGAGGGGATCCCTCCTGACCAA 30096 Query 28674 CAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAC 28733 ||||| || |||||||| || || || |||||||| ||| |||||||||||||| Sbjct 30095 CAGAGGCTGATCTTTGCCGGTAAGCAGCTGGAAGATGGACGTACTCTGGCCGATTATAAC 30036 Query 28734 ATTCAAAAAGAATCTACTCTGCACATGGT 28762 ||||| || ||||| || |||||| |||| Sbjct 30035 ATTCAGAAGGAATCGACCCTGCACTTGGT 30007 >seq121729 Length=15342 Score = 93.3 bits (102), Expect = 3e-14 Identities = 146/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 28554 ATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTCA 28613 |||||||| ||||| ||||| | ||||| ||||| |||||| || ||| |||| Sbjct 15297 ATGCAAATCTTTGTGAAAACGCTGACGGGGAAAACTATTACCTTAGAGGTGGAGAGTTCA 15238 Query 28614 GAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCAA 28673 || || | | | | ||| || ||| || |||||||| | || || || Sbjct 15237 GACACCATTGATAACGTGAAGGCTAAGATCCAGGATAAAGAGGGTATCCCTCCTGACCAG 15178 Query 28674 CAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAC 28733 ||||| || || ||||| || || ||| |||||||| ||| |||| ||||||||| Sbjct 15177 CAGAGGCTGATTTTTGCTGGTAAGCAACTGGAAGATGGACGTACTCTGGCTGATTATAAC 15118 Query 28734 ATTCAAAAAGAATCTACTCTGCACATGGT 28762 ||||| || || ||||||||||| |||| Sbjct 15117 ATTCAGAAGGAGTCTACTCTGCATCTGGT 15089 >seq1049907 Length=2088 Score = 89.7 bits (98), Expect = 4e-13 Identities = 145/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 28554 ATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTCA 28613 ||||| || ||||| ||||| || ||||| ||||| |||||| || ||| ||| Sbjct 46 ATGCAGATCTTTGTGAAAACTTTGACGGGGAAAACTATTACCTTGGAGGTGGAGAGTTCG 105 Query 28614 GAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCAA 28673 || || | | | | ||| |||||| || || ||||| | || || || Sbjct 106 GACACCATTGATAACGTGAAGGCTAAAATCCAGGATAAGGAGGGCATCCCTCCCGACCAG 165 Query 28674 CAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAC 28733 ||||| || || ||||| || || || ||||||||| ||| |||| ||||||||| Sbjct 166 CAGAGGCTGATTTTTGCTGGTAAGCAGTTGGAAGATGGACGTACTCTGGCTGATTATAAC 225 Query 28734 ATTCAAAAAGAATCTACTCTGCACATGGT 28762 ||||| || || ||||||||||| |||| Sbjct 226 ATTCAGAAGGAGTCTACTCTGCATCTGGT 254 >seq20237 Length=39773 Score = 89.7 bits (98), Expect = 4e-13 Identities = 145/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 28554 ATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTCA 28613 ||||| || |||||||| || |||| |||||||||||||| ||| || || Sbjct 30496 ATGCAGATCTTTGTAAAGACCCTAACAGGTAAAACCATTACTCTGGAAGTCGAGAGCTCG 30555 Query 28614 GAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCAA 28673 || || | | || ||||| || ||| ||||| |||||| | || || || Sbjct 30556 GACACCATCGATAATGTCAAGGCTAAGATCCAGGACAAGGAGGGAATCCCACCTGACCAG 30615 Query 28674 CAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAC 28733 ||||| | |||||||| || || || |||||||| | ||| ||||||||||||| Sbjct 30616 CAGAGGTTGATCTTTGCCGGTAAGCAGCTGGAAGATGGTCGTACTCTGGCCGATTATAAT 30675 Query 28734 ATTCAAAAAGAATCTACTCTGCACATGGT 28762 ||||| || || || || || ||| |||| Sbjct 30676 ATTCAGAAGGAGTCAACCCTTCACCTGGT 30704 >seq73042 Length=21847 Score = 87.8 bits (96), Expect = 1e-12 Identities = 89/116 (77%), Gaps = 0/116 (0%) Strand=Plus/Minus Query 28647 GACAAAGAGGGAGTGCCCGTAGATCAACAGAGACTTATCTTTGCGGGCAAACAATTGGAA 28706 ||||| |||||| | ||| ||||| ||||| || || ||||| |||||||| | || Sbjct 581 GACAAGGAGGGAATTCCCCCTGATCAGCAGAGGCTCATTTTTGCTGGCAAACAGCTTGAG 522 Query 28707 GATTCTAAAACTATGGCCGATTATAACATTCAAAAAGAATCTACTCTGCACATGGT 28762 ||| ||| | || |||||||||||||| || ||||||||||| |||||||| Sbjct 521 GATGGCCGAACCCTCGCAGATTATAACATTCAGAAGGAATCTACTCTTCACATGGT 466 >seq59979 Length=24830 Score = 84.2 bits (92), Expect = 2e-11 Identities = 144/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 28554 ATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTCA 28613 |||||||| ||||| ||||| | ||||| ||||| |||||| || ||| |||| Sbjct 7428 ATGCAAATCTTTGTGAAAACGCTGACGGGGAAAACTATTACCTTGGAGGTGGAGAGTTCA 7369 Query 28614 GAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCAA 28673 || || | | | | ||| || ||| || |||||||| | || || || Sbjct 7368 GACACCATTGATAACGTGAAGGCTAAGATCCAGGATAAAGAGGGTATCCCTCCTGACCAG 7309 Query 28674 CAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAC 28733 ||||| || || ||||| || || ||| | |||||| ||| |||| ||||||||| Sbjct 7308 CAGAGGCTGATTTTTGCTGGTAAGCAACTAGAAGATGGACGTACTCTGGCTGATTATAAC 7249 Query 28734 ATTCAAAAAGAATCTACTCTGCACATGGT 28762 ||||| || || ||||| ||||| |||| Sbjct 7248 ATTCAGAAGGAGTCTACACTGCATCTGGT 7220 >seq353026 Length=6314 Score = 82.4 bits (90), Expect = 6e-11 Identities = 93/125 (74%), Gaps = 0/125 (0%) Strand=Plus/Minus Query 28632 AAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCAACAGAGACTTATCTTTGCG 28691 ||| |||| ||| ||||||||||| | || |||||||||||| | ||| |||| Sbjct 4533 AAGGAAAAGATCCAGGACAAAGAGGGGATTCCTCCGGATCAACAGAGATTGATCGTTGCA 4474 Query 28692 GGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAACATTCAAAAAGAATCTACT 28751 || || || | |||||| | ||| |||| || ||||||||||| ||||| ||||| Sbjct 4473 GGGAAGAAACTTGAAGATGGGAGGACTTTGGCAGACTATAACATTCAGAAAGAGTCTACC 4414 Query 28752 CTGCA 28756 ||||| Sbjct 4413 CTGCA 4409 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 372243277575405