Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Picea_20abies_20[ConGenIE_20PRJEB1822-1.0_202015-05-12] 10,253,695 sequences; 12,301,475,675 total letters Query= NC_020485.1 Length=34302 Score E Sequences producing significant alignments: (Bits) Value seq416950 639 3e-179 seq1393656 230 4e-56 >seq416950 Length=5269 Score = 639 bits (708), Expect = 3e-179 Identities = 1626/2432 (67%), Gaps = 99/2432 (4%) Strand=Plus/Plus Query 4981 TCCCAAAGTTCTGTGATATGCTCTACAGCA-TCTCGATCCAACACACTTCCTCGTTTCTG 5039 ||||| |||||| | | ||| || || ||| | || |||||||| || || | |||||| Sbjct 340 TCCCACAGTTCTTTTACATGTTCCACGGCAGTGTC-ATCCAACATACATCGTTGTTTCTT 398 Query 5040 GGGTTGGGTCGGCTCTGGCTGTAAGGTACCAAGCGGTGAGCGTCCAGTTGGGCCAAAGTG 5099 ||||| ||| | | | | |||||| | || |||||| |||| | | | | || Sbjct 399 GGGTTTGGTTGCTTTTCGA-GTAAGGCATCAGGCGGTGGCCGTCTATGTCTACAAGGGTC 457 Query 5100 CGGTCTTTCCACGGTCTCAGTGTTCTCTTCAGGGTTGTCTCGGTGACAGTAAATGGGTGG 5159 ||||||||| || |||| ||| | | | | ||||| |||||||| || || ||| | Sbjct 458 TTGTCTTTCCAAGGCCTCACTGTGCGCGTTAAAGTTGTTTCGGTGACTGTGAACGGG--G 515 Query 5160 GCTCCTGACTGCG---CGCTTGCCAGGGTGCGTTTGAGGCTGAGGCGGCTGGTGTTGAAC 5216 | | | || | || | || ||||| ||||| | || ||||||||||||| || Sbjct 516 CCGCGTTGCTTTGGTTCG-TAGCGAGGGTCCGTTTTAAACTCAGGCGGCTGGTGTGAAAG 574 Query 5217 CGCTGCTTTTCGTCTCCCTGTAGGTCAGCCAAGTAGCATTTTACCATCAGGTCATAGTTT 5276 ||||| | | | ||| ||||| |||||||||||| ||| |||||| | Sbjct 575 CGCTGGCTCCCCTG---CTGCGCGTCAGACAAGTAGCATTTAGCCAAAGTGTCATAACAT 631 Query 5277 AAGCTTTCCGC---TGCGTGTCCTTTGGCGCGAAGTTTGCCTTTGGAGATGTGCCCGCAT 5333 || ||| | ||| || || || || || ||||| ||||| | ||||| || Sbjct 632 AA---TTCAGTAGTTGCATGACCCTTCGCCCGCAGTTTACCTTTACCCACATGCCCACAG 688 Query 5334 TGAGGACATTGTAAACA-----TTTAAGAGCATACAGTTTTGGCGCCAAGAAAACGGATT 5388 || ||| |||| ||| | |||||||||||| || || | || || |||| Sbjct 689 CAAGTACA-----AACAGTGTTTTTTAAAGCATACAGTTTAGGAGCGAGAAAGACAGATT 743 Query 5389 CTGGGGAATAAGCATCTGAACCGCAGTTGGCACATGTTGTTTCGCATTCTACTAACCAGG 5448 | | | ||||||| || || || |||| || || ||||| || ||||| | Sbjct 744 CAGAACTAAAAGCATCAGACTTACATTTTTCACACTGAGTCTCACATTCAACCAACCATG 803 Query 5449 TCAACTGA-GGACTTGCTGGGTCAAAAACCAGCGCGCCTCCGttttttttGATGCGCTTC 5507 | || || || || ||| |||||||| ||| ||||| ||||| || ||||| | Sbjct 804 T-AATAGATGGGTTTTTTGGATCAAAAACTAGCTTCCCTCCATTTTTCTTAATGCGGTGT 862 Query 5508 TTACCTCGGGTTTCCATGAGGCGATGTCCTCGTTCTGTGACAAAAAGGCTGTCTGTGTCT 5567 ||||||| |||||||| || || || ||| || ||||| | |||||| ||||| Sbjct 863 TTACCTCTTTGCTCCATGAGCCGGTGCCCCTCTTCGGTCACAAACAAGCTGTCAGTGTCC 922 Query 5568 CCGTAAACTGACTTGAGGGAGCGTTCTTCAAGGGGAATTCCCCGGTCCTCGGAGTATAGA 5627 ||||| || || || | | || | || || |||| | ||| |||| ||||| | Sbjct 923 CCGTAGACAGATTTTATAGTTTTTTGATGTAGTGGCTTTCCTCTGTCTTCGGCGTATAAA 982 Query 5628 AAATCAGACCACTCAGAAACAAACGCGCGTGTCCAAGCAAGAACAAATGAGGCAATGTGA 5687 || || | ||||||||| ||||| | | ||||| || | |||||| || |||||||| Sbjct 983 AATTCTGCCCACTCAGACACAAATACTCTAGTCCAGGCCAAAACAAACGAAGCAATGTGG 1042 Query 5688 GAAGGATAGCGATCGTTGTTTAT-AAGGGGGTCTGTTTTTTCAAGAGTATGTAAGCACAT 5746 |||| || | | ||| | ||| || || | | | ||||| | ||| |||||||| || Sbjct 1043 GAAGCGTACCTGTTGTTTTCTATTAAAGGAGAGT-TGTTTTCTAAAGTGTGTAAGCATAT 1101 Query 5747 GTCCCCTTCTTCAGCTTCCAAAAATGTGATTGGTTTGTAAGTGTAGGTCACGTGATTTGT 5806 ||| | ||||||| ||| ||||| |||||||| || || | || ||||||||| | Sbjct 1102 GTCATCATCTTCAGTTTCTAAAAACGTGATTGGCTTATACTTATATGTCACGTGACTATC 1161 Query 5807 TTCATTGCTGGGACTATAAAAGGGGGCGTTTCCCCCCTCATCATCACTTTCTTCCGGTTC 5866 || |||| || ||||||| | | | | | | ||||||||||| || || Sbjct 1162 TT------TGGGTATA-AAAAGGGTGTGCT--CTTCGTTTTCATCACTTTCATCTAACTC 1212 Query 5867 GCTGTCTTCA-AAGGTCAGCTGTTGGGGTACGTACTGACGTGAAAATGCAGGCATAACTT 5925 | || ||||| || | |||| | ||| ||| |||| | ||||||| || Sbjct 1213 GG------CAGAAGGT--GCAGGTGGGTAAGCTAC-GAC----AAATTCTGGCATAATTT 1259 Query 5926 GTGCGCTAAGGTTGTCAGTTTCTATATATGAGGAAGATTTGATGGAAATTGTTCCGGCAG 5985 || |||| ||||||||||||||| |||| |||||||||||||||| | || | Sbjct 1260 CAGCACTAAAGTTGTCAGTTTCTATGAATGATGAAGATTTGATGGAAAAGTTACCTCTGG 1319 Query 5986 CTATGCCTTTTAAATGTTCTGGCCCC-ATTTGGTCAGAAAACACAATTTGTCGGTTGTCA 6044 | ||| |||| | | ||||| | | |||||| ||||||||||||| | |||||| Sbjct 1320 CGATGGTTTTTGAC-GCGCTGGCTTCTAGTTGGTCTGAAAACACAATTTTTTTGTTGTCC 1378 Query 6045 AGCTTAGTAGCAAATGACCCATAGAGGGCGTTAGAAAGTAGTTTAGCAATGGAGCGCTGT 6104 | ||||| ||||| ||||| | |||||| |||||||| ||||| ||| ||| Sbjct 1379 AATTTAGTGGCAAAGCTGCCATATAAGGCGTTGGAAAGTAGCTTAGCTATGCTTCGCATG 1438 Query 6105 GTTTGGTTCTTTTCCCGATCGGCTTTTTCCTTGGCCGCAATGTTTAATTGCACATATTCA 6164 |||||||||||||| || |||||||| ||||| | ||||||| ||||| ||||| Sbjct 1439 GTTTGGTTCTTTTCTTTGTCTGCTTTTTCTTTGGCTCCGATGTTTAGCTGCACGTATTCT 1498 Query 6165 CGGGCTAAACAGTTCCAGCCTGGAAACACGGTGGTGCGTTCGTCGGGAATTAGTCTGACG 6224 ||| | || ||||| |||| || | ||| || | |||||| |||| | | || Sbjct 1499 TTGGCCACGCACTTCCACTCTGGGAAGATGGTTGTTCTTTCGTCTGGAAGAATGCGCACT 1558 Query 6225 TTCCAGCCGCGGTTGTGAAGTGTAATTACGTCTATGCTTGTAGCTACTTCACCGCGTAAG 6284 ||| || | |||||| | ||||| | |||||| ||||||||||| || || || Sbjct 1559 GCCCATCCTCTGTTGTGCAAAGTAATCAAGTCTATAGAAGTAGCTACTTCTCCTCGCAAA 1618 Query 6285 GGCTCGTTAGTCCAACACAGTCGTCCACCTTTGCGGGATCCAAAAGGAGGAAGAACATCT 6344 |||||||||||||| ||||| | ||| ||||| | ||| | ||| ||||| || |||| Sbjct 1619 GGCTCGTTAGTCCAGCACAGCCTTCCGCCTTTTCTGGAGCAAAACGGAGGCAGTTCATC- 1677 Query 6345 AAGTTGC-GTTCATCTGGAGGGTCGGCGTCAATTGTAAAAATAGCAGGCAAAAGTTGTTT 6403 ||| | || |||||||| || ||||| || || ||||| | || | ||| | Sbjct 1678 AAGAAACAACTCGTCTGGAGGATCCGCGTCGATGGTGAAAATGCCTGGAAGAAGACACTC 1737 Query 6404 GTTAAAATAATCAATTAT---CTGTAACTTATTA---CTAAGGGCCAATTCCCAGTCGCG 6457 || |||||| |||||| | || ||| || | | | | | ||| | |||| Sbjct 1738 GTCAAAATAGTCAATTTTTTGCTCTAAGTTTTCAAGCTTTCTGATCCATT--CTGTCG-- 1793 Query 6458 TACGGCCAAAGCTCGTTCATATGGACTTAAGGGGGCACCCCATGGCATAGGATGGGTTAA 6517 | || || |||| |||||| ||| |||| || || | || | |||||| |||| Sbjct 1794 --CAGCTAAGGCTCTTTCATACGGATTTAAAGGCTGCCCGCTGGGAAAAGGATGCGTTAG 1851 Query 6518 AGCTGAAGCGTACATGCCGCAAATGTCATAAACATAAATGGGCTCCTGAAGTACTCCAAT 6577 ||| || ||||||||||| |||||||| |||||||| |||| | | | ||||| Sbjct 1852 AGCACTGGCATACATGCCGCAGATGTCATACACATAAATTGGCTGTTCCATGATGCCAAT 1911 Query 6578 GTAAGTTGGGTAACAGCGCCCTCCTCTGATGCTGGCGCGCACGTAGTCATAAAGCTCGTG 6637 ||||| || || ||||| || || | |||||| ||| ||||||||||| | || || Sbjct 1912 ATAAGTGGGATAGCAGCGACCACCACGGATGCTCTGGCGGACGTAGTCATACATTTCATG 1971 Query 6638 TGAGGGAGCCAGT-AGGTGGCGACTGAGGTGCGCTCGTTGTGATTTTTCTGCTCGGTAAA 6696 || || || | | | | | || | || ||| | || | || ||| ||| | Sbjct 1972 AGATGGTGCTAATAAAACGTTGTCT-AAGTTTGCTTTATTTGGCCTAACTTCTCTGTATA 2030 Query 6697 GAATTTGTCTAAAGATGGCATGAGAGTTGGAAGAGATGGTAGGCCGCTGGAAAATGTTAA 6756 ||||| |||| || ||||||||||| || || || || | || |||||||||| Sbjct 2031 ATATTTGCTTAAAAATTGCATGAGAGTTAGAGCTAATAGTGGGTCTTTGAAAAATGTTAA 2090 Query 6757 AACGGGCGTCAGG-CAGTCCAACTGATTCGCTAATAAAGTGAGCGTAAGACTCCTGCAAC 6815 | || ||||| ||| || ||| || |||||||| |||||| || || | Sbjct 2091 ATGAAGCATCAGGTAAGTTCACTTGAGAAGC-AATAAAGTTTTTGTAAGATTCTTGGAGT 2149 Query 6816 TTTTCTACCAGCGAAGCTGTAACTATTACATCCAAAGCACAGTAGTCTAGTGTTTCTTTA 6875 || | ||| || | | ||| |||| || || |||| |||| || |||| | Sbjct 2150 TTGTTTACTAGGGCCGATGTCACTAACACGTCTTGCACACAATAGTGCAGCGTTTGCTGG 2209 Query 6876 ACAATGTTATAACGTGTTTCTCC--TTTTTGCT-TCCAGAGTTCAAGGTTGAAGAGGTAT 6932 | |||| ||| | | | ||||| || |||| || | ||||| | || Sbjct 2210 ATTATGTCGTAA---GCCCCCACGTTTTTTTCTCTCCACAGAGCCTTGTTGAGTTGATAC 2266 Query 6933 TCCTCTTGGTCCTTCCAATACTCTT-GGAGAGGAAATCCATTTGCGTCTCCACGGTAAGA 6991 || || | ||||| || |||| || ||||| |||| | ||| ||||||| Sbjct 2267 TCTTCGCTGGATTTCCAGTA-TCTTAGGCTTGGAAAGCCATCCTCATCTTGTTGGTAAGA 2325 Query 6992 GCCCAACATGTAAAACTGATTAACGGCTTGGTAGGGACAGCAGCCTTTTTCTACAGGTAA 7051 || | | || || | ||| || |||| ||| ||||||| |||||||||||||| | Sbjct 2326 CCCTATTCTATAGAATTCATTTACTGCTTCGTACGGACAGCTTCCTTTTTCTACAGGCAG 2385 Query 7052 AGAGTACGCTTGAGCAGCTTTGCGT-AGCGACGTGTGGGTAAGAGCAAAAGTGTCCCGCA 7110 ||| || |||||| || | | ||| | |||||||| || ||||||||||| | | Sbjct 2386 CTCGTAAGCCCCAGCAGCATTTCTTAAGCTA-GTGTGGGTCAGCGCAAAAGTGTCTCTTA 2444 Query 7111 CCATAACTTTCACAAACTGGTATTTGAAGTCC----CTGT---CATCACACACTCCGCGT 7163 |||||| ||| ||||||||||| ||| |||| |||| | | ||||||| Sbjct 2445 CCATAAATTTAACAAACTGGTACTTGTGGTCCGCGGCTGTGAGCTTTCCACACTC----- 2499 Query 7164 TGCCAGTCTGTGTAATCTGAGCGCTTTTTATATTTAGGATTTGGAAGTGCATAGGTTACA 7223 ||| || | | ||||| || |||| || || ||||| || | | | | | Sbjct 2500 --CCAATCGGCGAAATCTTTTCGTTTTTCGTACTTTGGATTAGGTAAGCAAAAAGAAATG 2557 Query 7224 TCGTTGAAAAGAATTTTTCCACAGCGTGGCATAAAGTTGCGAGAAATTTTAAATGGACCT 7283 || ||||| || ||||| || | ||||||||| || | | ||||| || | | Sbjct 2558 TCATTGAACAGTATTTTACCGTTTCTTGGCATAAAATTTCTATTTATTTTGAAAGCAGGC 2617 Query 7284 GGTACTTCAGAACGGCTGTTAATAACTTGAGCCGCAAGTACAATTTCATCAAAGCCGTTA 7343 | || || | | | ||| || ||||| || || | || || |||||||| ||| Sbjct 2618 AGAACATCCGTTCTGTTGTGTATGACTTGCGCGGCCAACACGATCTCATCAAAACCGCAG 2677 Query 7344 ATATTGTGCCCAATAACATAAAATTCAATAAA 7375 || ||||| ||||| ||||||| ||||||||| Sbjct 2678 ATGTTGTGGCCAATTACATAAATTTCAATAAA 2709 Score = 230 bits (254), Expect = 4e-56 Identities = 379/545 (70%), Gaps = 4/545 (1%) Strand=Plus/Plus Query 8482 GGAAAATATCACCGGCCCCGTCGTTTTGAACCTAAAAGAAAGTTCAACAGAATCAATTTC 8541 |||||||| ||| || || ||| | ||||||| ||||| | ||| | ||| ||||| || Sbjct 3720 GGAAAATACCACTGGGCCGGTCACTCTGAACCTGAAAGATATTTCCATAGAGTCAATGTC 3779 Query 8542 GGCATCGTTAACTGCCGCTTGGCGCAAAATTTCACCCACGTCTCCGGAGTTGTCTTGGTA 8601 || || ||||||||| |||| ||||| |||| |||||||||| ||| || || || Sbjct 3780 TGCGTCATTAACTGCCACTTGCTTTAAAATCTCACTCACGTCTCCGCTGTTATCGTGATA 3839 Query 8602 GGCAATTTCCGCCATAAACTGCTCGATTTCTTCTTCCTGCAAATCGCCGCGACCTGCTCG 8661 || ||||| |||||||||||||| || ||||| | || || || || | ||||||| Sbjct 3840 AGCTATTTCTGCCATAAACTGCTCAATCTCTTCCTGCTCTAACTCTCCTCTCCCTGCTCT 3899 Query 8662 CTCCACTGTGGCCGCTAAATCGTTGGAAATGCGACCCATAAGCTGCGAAAAAGCATTGAG 8721 ||| |||||||| || || || || ||||||| ||| | | |||||| | Sbjct 3900 CTCAACTGTGGCAGCCAAGTCAATGCTAATGCGAGACATGATGTTACTAAAAGCCTGTTC 3959 Query 8722 GCCCGTTTCGTTCCAGACGCGACTGTACACCACGTCTCCGCGAGCATCACGTGCGCGCAT 8781 || |||| ||||| || | |||||||| | | ||| | | | || | ||| Sbjct 3960 CCCATTTTCATTCCACACTCTGCTGTACACAATTTGTCCATCTTCGTTTCTGGCTCTCAT 4019 Query 8782 TACCACTTGGGCAAGATTAAGTTCCACGTGTCGAGCAAAAACAGGGTAGTT--GCGTAGT 8839 ||| || || || |||||||| ||| | || ||||| ||| || | | | | Sbjct 4020 TACTACCTGCGCCAGATTAAGCATCACATATCTCCCAAAA--GGGGAAGATACCCTAATT 4077 Query 8840 CGCTGGTAAAGATAGTTAAGGGTGGTGGCAGCATGCTCGGCTACaaaaaaaTACATTATC 8899 | || | | ||||| || ||||| ||| || || || |||||||| |||| | | Sbjct 4078 TGGTGATTTAAGTAGTTTAGTGTGGTAGCAATGTGTTCTGCCACAAAAAAGAACATCACC 4137 Query 8900 CAGCGACGCAGTGTAAGCTCATTGATGTCACCTAGGGCTTCCAGTCTTTCCATAGCTTCA 8959 ||||| | || || ||||| ||||||||||| || |||| | | ||| | ||| Sbjct 4138 CAGCGTTGGAGAGTTGTTTCATTAATGTCACCTAGCGCCTCCAAACGCTGAATAACCTCA 4197 Query 8960 TAAAAGTCAACAGCAAAATTAAAAAACTGACTGTTGCGCGCAGAAACTGTAAGTTCTTCT 9019 ||||| | |||||||| ||||||||||| ||| | ||||| || || || |||||| Sbjct 4198 TAAAAATTTACAGCAAAGTTAAAAAACTGCTGGTTTCTAGCAGACACAGTGAGCTCTTCT 4257 Query 9020 TCTAA 9024 ||||| Sbjct 4258 TCTAA 4262 >seq1393656 Length=1543 Score = 230 bits (254), Expect = 4e-56 Identities = 379/545 (70%), Gaps = 4/545 (1%) Strand=Plus/Plus Query 8482 GGAAAATATCACCGGCCCCGTCGTTTTGAACCTAAAAGAAAGTTCAACAGAATCAATTTC 8541 |||||||| ||| || || ||| | ||||||| ||||| | ||| | ||| ||||| || Sbjct 28 GGAAAATACCACTGGGCCGGTCACTCTGAACCTGAAAGATATTTCCATAGAGTCAATGTC 87 Query 8542 GGCATCGTTAACTGCCGCTTGGCGCAAAATTTCACCCACGTCTCCGGAGTTGTCTTGGTA 8601 || || ||||||||| |||| ||||| |||| |||||||||| ||| || || || Sbjct 88 TGCGTCATTAACTGCCACTTGCTTTAAAATCTCACTCACGTCTCCGCTGTTATCGTGATA 147 Query 8602 GGCAATTTCCGCCATAAACTGCTCGATTTCTTCTTCCTGCAAATCGCCGCGACCTGCTCG 8661 || ||||| |||||||||||||| || ||||| | || || || || | ||||||| Sbjct 148 AGCTATTTCTGCCATAAACTGCTCAATCTCTTCCTGCTCTAACTCTCCTCTCCCTGCTCT 207 Query 8662 CTCCACTGTGGCCGCTAAATCGTTGGAAATGCGACCCATAAGCTGCGAAAAAGCATTGAG 8721 ||| |||||||| || || || || ||||||| ||| | | |||||| | Sbjct 208 CTCAACTGTGGCAGCCAAGTCAATGCTAATGCGAGACATGATGTTACTAAAAGCCTGTTC 267 Query 8722 GCCCGTTTCGTTCCAGACGCGACTGTACACCACGTCTCCGCGAGCATCACGTGCGCGCAT 8781 || |||| ||||| || | |||||||| | | ||| | | | || | ||| Sbjct 268 CCCATTTTCATTCCACACTCTGCTGTACACAATTTGTCCATCTTCGTTTCTGGCTCTCAT 327 Query 8782 TACCACTTGGGCAAGATTAAGTTCCACGTGTCGAGCAAAAACAGGGTAGTT--GCGTAGT 8839 ||| || || || |||||||| ||| | || ||||| ||| || | | | | Sbjct 328 TACTACCTGCGCCAGATTAAGCATCACATATCTCCCAAAA--GGGGAAGATACCCTAATT 385 Query 8840 CGCTGGTAAAGATAGTTAAGGGTGGTGGCAGCATGCTCGGCTACaaaaaaaTACATTATC 8899 | || | | ||||| || ||||| ||| || || || |||||||| |||| | | Sbjct 386 TGGTGATTTAAGTAGTTTAGTGTGGTAGCAATGTGTTCTGCCACAAAAAAGAACATCACC 445 Query 8900 CAGCGACGCAGTGTAAGCTCATTGATGTCACCTAGGGCTTCCAGTCTTTCCATAGCTTCA 8959 ||||| | || || ||||| ||||||||||| || |||| | | ||| | ||| Sbjct 446 CAGCGTTGGAGAGTTGTTTCATTAATGTCACCTAGCGCCTCCAAACGCTGAATAACCTCA 505 Query 8960 TAAAAGTCAACAGCAAAATTAAAAAACTGACTGTTGCGCGCAGAAACTGTAAGTTCTTCT 9019 ||||| | |||||||| ||||||||||| ||| | ||||| || || || |||||| Sbjct 506 TAAAAATTTACAGCAAAGTTAAAAAACTGCTGGTTTCTAGCAGACACAGTGAGCTCTTCT 565 Query 9020 TCTAA 9024 ||||| Sbjct 566 TCTAA 570 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 96294160991760