Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Picea_20abies_20[ConGenIE_20PRJEB1822-1.0_202015-05-12] 10,253,695 sequences; 12,301,475,675 total letters Query= NC_021168.1 Length=34391 Score E Sequences producing significant alignments: (Bits) Value seq416950 509 3e-140 seq1393656 150 3e-32 >seq416950 Length=5269 Score = 509 bits (564), Expect = 3e-140 Identities = 1592/2432 (65%), Gaps = 70/2432 (3%) Strand=Plus/Plus Query 4661 ATCCCACAGTTCGGTAACGTGTTCTATGGCA-TCTCGATCCAGCAGACTTCTTGGTTGCG 4719 |||||||||||| | || ||||| | |||| | || ||||| || || || | ||| | Sbjct 339 ATCCCACAGTTCTTTTACATGTTCCACGGCAGTGTC-ATCCAACATACATCGTTGTTTCT 397 Query 4720 AGGGTTGGGACGACTTTCGCTGTAGGGCACCAGCCGGTGGGCGTCCAGGGCTGCGAGAGT 4779 ||||| || | ||||| ||| |||| ||| |||||| |||| | | || | || || Sbjct 398 TGGGTTTGGTTGCTTTTCGA-GTAAGGCATCAGGCGGTGGCCGTCTATGTCTACAAGGGT 456 Query 4780 CATGTCCTTCCAGGGTCTGAGGGTCCGCGTCAGGGTGGTCTCGGTGACGGTAAAAGGGTG 4839 | |||| ||||| || || | || ||||| | || || |||||||| || || ||| Sbjct 457 CTTGTCTTTCCAAGGCCTCACTGTGCGCGTTAAAGTTGTTTCGGTGACTGTGAACGGG-- 514 Query 4840 GGCCCC--TGGTTGGGCGCTT-GCCAGTGTGCGTTTGAGGCTCATCCTGCTGGTGCTGAA 4896 ||| | || || || | | || || || ||||| | |||| | ||||||| || Sbjct 515 -GCCGCGTTGCTTTGGTTCGTAGCGAGGGTCCGTTTTAAACTCAGGCGGCTGGTGTGAAA 573 Query 4897 GTGGACGTTTTCGCCCTGGGAATCGGCCAAGTAGCACTTAAGCATGAGGTCGTAGCTGAG 4956 | | | | | ||| | || | ||||||||| ||| || ||| || | | Sbjct 574 GCGCTGGCTCCCCTGCTGCGCGTCAGACAAGTAGCATTTAGCCAAAGTGTCATAACATA- 632 Query 4957 AGATTCAGCCG---CGTGTCCTTTGGCGCGCAGCTTCCCCTTAGAAACATGCAGACACTT 5013 |||||| | | || || || || ||||| || || ||| |||||| ||| Sbjct 633 --ATTCAGTAGTTGCATGACCCTTCGCCCGCAGTTTACCTTTACCCACATGCCCACAGCA 690 Query 5014 GCTACAGTGCAGAGACTTG-AGCGCATAGAGCTTAGGGGCTaaaaaaaCTGATTCAGGGG 5072 |||| ||| | || | ||||| || ||||| || | ||| || ||||||| Sbjct 691 AGTACAAA-CAGTGTTTTTTAAAGCATACAGTTTAGGAGCGAGAAAGACAGATTCAGAAC 749 Query 5073 AAAAGGCATCTGCGCCACACTGAGCGCATACAGTCTCACACTCTACCAGCCAGGTGA--G 5130 ||| ||||| | ||| | | || ||||||||| || |||| ||| || | | Sbjct 750 TAAAAGCATCAGACTTACATTTTTCACACTGAGTCTCACATTCAACCAACCATGTAATAG 809 Query 5131 CTCGGGTTGGTTTGGGTCAAAAACCAACTTGCCTCCAttttttttAATCCGCTTCTTACC 5190 | || || ||||| |||||||| | ||| ||||||||||| ||||| || | ||||| Sbjct 810 ATGGGTTT--TTTGGATCAAAAACTAGCTTCCCTCCATTTTTCTTAATGCGGTGTTTACC 867 Query 5191 TCGGGTTTCCATGAGTCTGTGTCCTGCTTCGGTCACAAAAAGACTGTCGGTGTCCCCGTA 5250 || |||||||| | ||| || ||||||||||||| | ||||| ||||||||||| Sbjct 868 TCTTTGCTCCATGAGCCGGTGCCCCTCTTCGGTCACAAACAAGCTGTCAGTGTCCCCGTA 927 Query 5251 GACCGATTTGAGCTGTCTCTGTTCCAGAGGGGTGCCGCGGTCCTCGTCGTACAAAAACTG 5310 ||| ||||| | | | || | || || | || | ||| ||| |||| ||||| | Sbjct 928 GACAGATTTTATAGTTTTTTGATGTAGTGGCTTTCCTCTGTCTTCGGCGTATAAAAATTC 987 Query 5311 AGACCACTCTGAGACGAAAGCTCTGGTCCACGCTAATACAAATGAAGCTATCTGCGAGGG 5370 | |||||| || || || |||| ||||| || || ||||| ||||| || || || | Sbjct 988 TGCCCACTCAGACACAAATACTCTAGTCCAGGCCAAAACAAACGAAGCAATGTGGGAAGC 1047 Query 5371 GTATCTGTCATTTTCAATGAGAGGGTCAACCTTTTGTAAGGTGTGGAGACAGAGGTCGTC 5430 ||| |||| ||||| || | ||| |||| ||| ||||| | || | ||| || Sbjct 1048 GTACCTGTTGTTTTCTATTAAAGGAGAGTTGTTTTCTAAAGTGTGTAAGCATATGTCATC 1107 Query 5431 CTCTTCCGCGTCCATAAAAGTGATTGGCTTATAGGTGTAAGTCACGTGACCATCGGGGTG 5490 ||||| | || | ||| |||||||||||||| | || |||||||||| ||| Sbjct 1108 ATCTTCAGTTTCTAAAAACGTGATTGGCTTATACTTATATGTCACGTGACTATCTT---- 1163 Query 5491 GCGTGGTGGGCTATAAAAGGGG-GCGTTACCCGCTTCGTCGTCACTTTCTTCCGCATCGC 5549 |||| ||||||| ||| | | | || || || |||||||| || ||| Sbjct 1164 ------TGGG-TATAAAAAGGGTGTGCTCTTCGTTT--TCATCACTTTCATCTAACTCGG 1214 Query 5550 TGTGGATCAGAGCCAGTTGTTCTGGTAAGTAAGCCCTTTCGAAGGCGGGCATGACCTCGG 5609 |||| || || | ||| |||||| | || | ||||| | || | Sbjct 1215 -------CAGA---AGGTG--CAGGTGGGTAAGCTACGACAAATTCTGGCATAATTTCAG 1262 Query 5610 CGCTCAAGGTGTCAGTTTCTACAAACGAGGTGGATTTGATATTCACGCGGCCGGAGGCAA 5669 | || ||| |||||||||||| || || | |||||||| | | || ||| | Sbjct 1263 CACTAAAGTTGTCAGTTTCTATGAATGATGAAGATTTGATGGAAAAGTTACCTCTGGCGA 1322 Query 5670 TG-TCCTTGACGGTGGAGGTTTCCATTTGGTCAGAAAAGACAATCTTTTTATTGTCAAGT 5728 || | |||||| | || ||| | |||||| ||||| ||||| ||||| ||||| | | Sbjct 1323 TGGTTTTTGACGC-GCTGGCTTCTAGTTGGTCTGAAAACACAATTTTTTTGTTGTCCAAT 1381 Query 5729 TTGGTGGCAAACGACCCGTAGAGGGCGTTAGATAGCAATTTGGCAATGGAACGTAAAGTT 5788 || |||||||| || || | |||||| || || | || || ||| || | ||| Sbjct 1382 TTAGTGGCAAAGCTGCCATATAAGGCGTTGGAAAGTAGCTTAGCTATGCTTCGCATGGTT 1441 Query 5789 TGAtttttttCACGGTCGGCCCGCTCCTTGGCCGCGATGTTAAGTTGTACGTACTCCCGG 5848 || || ||||| ||| || || ||||| ||||||| || || ||||| || | Sbjct 1442 TGGTTCTTTTCTTTGTCTGCTTTTTCTTTGGCTCCGATGTTTAGCTGCACGTATTCTTTG 1501 Query 5849 GCCACGCAGCGCCACTCCGGGAAAACAGTAGTGCGCTCGTCGGGCACTATACGGACGCTC 5908 |||||||| |||||| ||||| | || || | ||||| || | || || || | Sbjct 1502 GCCACGCACTTCCACTCTGGGAAGATGGTTGTTCTTTCGTCTGGAAGAATGCGCACTGCC 1561 Query 5909 CAGCCCCTGTTGTGCAGGGTAATAAGGTCCACACTGGTAGCTACCTCACCCCTGAGCGGT 5968 || || |||||||||| ||||| | ||| | | |||||||| || || | | || Sbjct 1562 CATCCTCTGTTGTGCAAAGTAATCAAGTCTATAGAAGTAGCTACTTCTCCTCGCAAAGGC 1621 Query 5969 TCGTTGGTCCAGCACAACCTACCGCCTTTTCGGGAGCAAAACGGGGGAAGTACGTCTAG- 6027 ||||| |||||||||| ||| |||||||||| |||||||||||| || ||| | || || Sbjct 1622 TCGTTAGTCCAGCACAGCCTTCCGCCTTTTCTGGAGCAAAACGGAGGCAGTTCATCAAGA 1681 Query 6028 --CAAGTTGGAAGCCGGTGGGTCGGCGTCGATGGTGAAGATGCCGGGGAGGAGAGACTTG 6085 ||| | | | || || || |||||||||||||| ||||| || || ||| ||| | Sbjct 1682 AACAACTCG---TCTGGAGGATCCGCGTCGATGGTGAAAATGCCTGGAAGAAGACACTCG 1738 Query 6086 TTAAAATAATTAA-TTTCTACGCGGTG-TTGCAAG-GCCAAGTCCCACTTTTTGACGGCC 6142 | |||||| | || ||| | | | | || |||| | ||| | | | | || Sbjct 1739 TCAAAATAGTCAATTTTTTGCTCTAAGTTTTCAAGCTTTCTGATCCATTCTGTCGCAGCT 1798 Query 6143 AGAGCCCTCTCGTACGGATTAAGGGGAGGACCCCAAGGCATGGGGTGGGTAAGGGCGGAA 6202 | || || || |||||||| | || | || | || | || || || || || Sbjct 1799 AAGGCTCTTTCATACGGATTTAAAGGCTGCCCGCTGGGAAAAGGATGCGTTAGAGCACTG 1858 Query 6203 GCGTACATGCCACAAATGTCATAAACATAAAGAGGCTGGCGTAAAACGCCAATGTATGTA 6262 || |||||||| || |||||||| ||||||| ||||| | | |||||| || || Sbjct 1859 GCATACATGCCGCAGATGTCATACACATAAATTGGCTGTTCCATGATGCCAATATAAGTG 1918 Query 6263 GGATAGCAACGTCCGCCGCGAATGCTGGCCCTGACGTAATCGTACATTTCATGGGAGGGT 6322 |||||||| || || || || ||||| | |||||| || ||||||||||| || ||| Sbjct 1919 GGATAGCAGCGACCACCACGGATGCTCTGGCGGACGTAGTCATACATTTCATGAGATGGT 1978 Query 6323 GCCAAAAGGCCGCTCCCCAGGTGGGTTTTTTGGGGTTTTACGGCGCGGTAGGCGATCTGT 6382 || || | || | | | || | ||| | || | || | | ||| || || Sbjct 1979 GCTAATAAAACGTTGTCTAAGTTTGCTTTATTTGGCCTAACTTCTCTGTATAATATTTGC 2038 Query 6383 CGAAAGATGGCGTGGGAGTTGGAAGAGATGGTAGGCCTCTGAAACACATTGAAGCTGGCC 6442 ||| || || || ||||| || || || || || ||||| | || || || Sbjct 2039 TTAAAAATTGCATGAGAGTTAGAGCTAATAGTGGGTCTTTGAAAAATGTTAAATGAAGCA 2098 Query 6443 TGCGAAAGGCCCAC--GGCGTCCTGTAGGAACTGCGCGTACGACTCCCTGAGTTTGTCCA 6500 | | | | ||| | | || || | ||| || || |||||||| | Sbjct 2099 TCAGGTAAGTTCACTTGAGAAGCAATA--AAGTTTTTGTAAGATTCTTGGAGTTTGTTTA 2156 Query 6501 CCAGCGCAGCGGTGACGAGGACGTCCAAGGCGCAGTAGTCCAGGGTTTCGCGTACGAGGT 6560 | || || | || || | ||||| | || |||| ||| |||| | | | || Sbjct 2157 CTAGGGCCGATGTCACTAACACGTCTTGCACACAATAGTGCAGCGTTTGCTGGATTATGT 2216 Query 6561 CGTAGGttttttcttgctttttttCCCAGAGTTCGCGGTTGAGGAGGTACTCTTCGCGGT 6620 |||| | | | |||| | ||| || | |||||| | |||||||||| | Sbjct 2217 CGTAAGCCCCCACGTTTTTTTCTCTCCACAGAGCCTTGTTGAGTTGATACTCTTCGCTGG 2276 Query 6621 CTTTCCAGTAGTCTGCGGC-AGGAAATCCTCGGTCGTCTGCTCGGTAAGCGCCCAACATG 6679 ||||||||| ||| ||| ||||| || || ||| | |||||| || | | Sbjct 2277 ATTTCCAGTA-TCTTAGGCTTGGAAAGCCATCCTCATCTTGTTGGTAAGACCCTATTCTA 2335 Query 6680 TAAAACTCGTTAACCGCTTTGTAAGGACAACAGCCTTTTTCTATGGGCAGGGCGTAGGCC 6739 || || || || || |||| ||| ||||| | |||||||||| ||||| |||| ||| Sbjct 2336 TAGAATTCATTTACTGCTTCGTACGGACAGCTTCCTTTTTCTACAGGCAGCTCGTAAGCC 2395 Query 6740 TGAGCCGCCTTGC-GAAGAGAGGTGTGGGTGAGCTGGAAGGTGTCTCTTACCATGACCTT 6798 ||| || || | ||| | |||||||| ||| || |||||||||||||| | || Sbjct 2396 CCAGCAGCATTTCTTAAGCTA-GTGTGGGTCAGCGCAAAAGTGTCTCTTACCATAAATTT 2454 Query 6799 TAAGTACTGATGTTTGAAGTCGGTGTCGTCGCAACAGCCCTGCTCCCACAAGGTGAAATC 6858 | |||| | ||| ||| | | | | || |||||| || |||||| Sbjct 2455 AACAAACTGGTACTTGTGGTCCGCGGCTGTGAGCTTTCCACACTCCCAATCGGCGAAATC 2514 Query 6859 CGTGCGCTTTTTCTGCCGAGGATTTGGCAGGGCAAAGGTGACATCGTTAAACAGGATTTT 6918 | || |||| | | ||||| || | | ||| | | || || ||||| ||||| Sbjct 2515 TTTTCGTTTTTCGTACTTTGGATTAGGTAAGCAAAAAGAAATGTCATTGAACAGTATTTT 2574 Query 6919 ACCGGCGCGAGGCATAAAATTTCTGGAGATGCGGAAAGGCCCGG--GAACGTCCGAGCGA 6976 |||| | |||||||||||||| || ||||| | || |||| |||| | Sbjct 2575 ACCGTTTCTTGGCATAAAATTTCTATTTATTTTGAAAG--CAGGCAGAACATCCGTTCTG 2632 Query 6977 TTGTTGATAACCTGCGCGGCCAGAACAATCTCGTCAAATCCGTTGATGTTATGCCCGACG 7036 |||| || || |||||||||| || ||||| ||||| ||| |||||| || || | Sbjct 2633 TTGTGTATGACTTGCGCGGCCAACACGATCTCATCAAAACCGCAGATGTTGTGGCCAATT 2692 Query 7037 ATGTAAAGTTCGAGAAAGCGCGGAACGCCTTT 7068 | |||| ||| | ||| | ||| |||||| Sbjct 2693 ACATAAATTTCAATAAACTGTGGACTGCCTTT 2724 Score = 150 bits (166), Expect = 3e-32 Identities = 347/523 (66%), Gaps = 16/523 (3%) Strand=Plus/Plus Query 8226 TCTGAACCTGAAAGAGAGTTCCACAGAATCAATATCGGTGTCGTTAACGGCCGCCTGCCG 8285 ||||||||||||||| | ||||| ||| ||||| || | ||| ||||| ||| | ||| Sbjct 3744 TCTGAACCTGAAAGATATTTCCATAGAGTCAATGTCTGCGTCATTAACTGCCACTTGCTT 3803 Query 8286 CAGAATCTCCTGTACGTCGCCAGAGTTGTCCTGGTAGGCGATCTCGGCCATAAACTGCTC 8345 | |||||| ||||| || ||| || || || || || || |||||||||||||| Sbjct 3804 TAAAATCTCACTCACGTCTCCGCTGTTATCGTGATAAGCTATTTCTGCCATAAACTGCTC 3863 Query 8346 GATCTCCTCTTCTTGGAGGTCGCCGTGGCCGGCCCTCTCCACGGTGGCGGCCAGGTCGTT 8405 ||||| || | | | || || || || ||||| || ||||| |||| ||| | Sbjct 3864 AATCTCTTCCTGCTCTAACTCTCCTCTCCCTGCTCTCTCAACTGTGGCAGCCAAGTCAAT 3923 Query 8406 AGAGATGCGACGCATGAGTTGAGAAAAGGCGTTTAGGCCGTTTTCGTTCCACACGCGGCT 8465 |||||| ||||| | | ||| || | | || ||||| |||||||| | ||| Sbjct 3924 GCTAATGCGAGACATGATGTTACTAAAAGCCTGTTCCCCATTTTCATTCCACACTCTGCT 3983 Query 8466 GTACACCAcccccccGGCGGAGTCACGGGCCCGCATGACGACCTGAGCGACGTT------ 8519 |||||| | || | || | ||| | ||| || ||||| || | || Sbjct 3984 GTACACAATTTGTCCATCTTCGTTTCTGGCTCTCATTACTACCTGCGCCAGATTAAGCAT 4043 Query 8520 --CAATTCTACGTGACGGGCGAAGACAGCGTAGTTTCTAAGACGCTGAAAGAGGTAGTTG 8577 || ||| | | ||| ||||| | | || ||| | ||| | |||||| Sbjct 4044 CACATATCTCCCAAAAGGG-GAAGATACCCTAATTT-------GGTGATTTAAGTAGTTT 4095 Query 8578 AGGGTGGTGGCGATGTGCTCGCACACGAAAAAGTACATGATCCAGCGGCGCAGTGTGGAC 8637 || ||||| || ||||| || ||| |||||| |||| | |||||| | || || | Sbjct 4096 AGTGTGGTAGCAATGTGTTCTGCCACAAAAAAGAACATCACCCAGCGTTGGAGAGTTGTT 4155 Query 8638 TCGTTGATGTCTCCGATGGCCTCGAGGCGCTCCATGGCCTCGTAGAAATCCACGGCAAAA 8697 || || ||||| || | ||||| | |||| || |||| || |||| || ||||| Sbjct 4156 TCATTAATGTCACCTAGCGCCTCCAAACGCTGAATAACCTCATAAAAATTTACAGCAAAG 4215 Query 8698 TTGAAAAACTGGGAATTTCGGGCCGACACCGTGAGTTCCTCTT 8740 || |||||||| |||| || ||||| ||||| || |||| Sbjct 4216 TTAAAAAACTGCTGGTTTCTAGCAGACACAGTGAGCTCTTCTT 4258 >seq1393656 Length=1543 Score = 150 bits (166), Expect = 3e-32 Identities = 347/523 (66%), Gaps = 16/523 (3%) Strand=Plus/Plus Query 8226 TCTGAACCTGAAAGAGAGTTCCACAGAATCAATATCGGTGTCGTTAACGGCCGCCTGCCG 8285 ||||||||||||||| | ||||| ||| ||||| || | ||| ||||| ||| | ||| Sbjct 52 TCTGAACCTGAAAGATATTTCCATAGAGTCAATGTCTGCGTCATTAACTGCCACTTGCTT 111 Query 8286 CAGAATCTCCTGTACGTCGCCAGAGTTGTCCTGGTAGGCGATCTCGGCCATAAACTGCTC 8345 | |||||| ||||| || ||| || || || || || || |||||||||||||| Sbjct 112 TAAAATCTCACTCACGTCTCCGCTGTTATCGTGATAAGCTATTTCTGCCATAAACTGCTC 171 Query 8346 GATCTCCTCTTCTTGGAGGTCGCCGTGGCCGGCCCTCTCCACGGTGGCGGCCAGGTCGTT 8405 ||||| || | | | || || || || ||||| || ||||| |||| ||| | Sbjct 172 AATCTCTTCCTGCTCTAACTCTCCTCTCCCTGCTCTCTCAACTGTGGCAGCCAAGTCAAT 231 Query 8406 AGAGATGCGACGCATGAGTTGAGAAAAGGCGTTTAGGCCGTTTTCGTTCCACACGCGGCT 8465 |||||| ||||| | | ||| || | | || ||||| |||||||| | ||| Sbjct 232 GCTAATGCGAGACATGATGTTACTAAAAGCCTGTTCCCCATTTTCATTCCACACTCTGCT 291 Query 8466 GTACACCAcccccccGGCGGAGTCACGGGCCCGCATGACGACCTGAGCGACGTT------ 8519 |||||| | || | || | ||| | ||| || ||||| || | || Sbjct 292 GTACACAATTTGTCCATCTTCGTTTCTGGCTCTCATTACTACCTGCGCCAGATTAAGCAT 351 Query 8520 --CAATTCTACGTGACGGGCGAAGACAGCGTAGTTTCTAAGACGCTGAAAGAGGTAGTTG 8577 || ||| | | ||| ||||| | | || ||| | ||| | |||||| Sbjct 352 CACATATCTCCCAAAAGGG-GAAGATACCCTAATTT-------GGTGATTTAAGTAGTTT 403 Query 8578 AGGGTGGTGGCGATGTGCTCGCACACGAAAAAGTACATGATCCAGCGGCGCAGTGTGGAC 8637 || ||||| || ||||| || ||| |||||| |||| | |||||| | || || | Sbjct 404 AGTGTGGTAGCAATGTGTTCTGCCACAAAAAAGAACATCACCCAGCGTTGGAGAGTTGTT 463 Query 8638 TCGTTGATGTCTCCGATGGCCTCGAGGCGCTCCATGGCCTCGTAGAAATCCACGGCAAAA 8697 || || ||||| || | ||||| | |||| || |||| || |||| || ||||| Sbjct 464 TCATTAATGTCACCTAGCGCCTCCAAACGCTGAATAACCTCATAAAAATTTACAGCAAAG 523 Query 8698 TTGAAAAACTGGGAATTTCGGGCCGACACCGTGAGTTCCTCTT 8740 || |||||||| |||| || ||||| ||||| || |||| Sbjct 524 TTAAAAAACTGCTGGTTTCTAGCAGACACAGTGAGCTCTTCTT 566 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 96544282995270