Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Picea_20abies_20[ConGenIE_20PRJEB1822-1.0_202015-05-12] 10,253,695 sequences; 12,301,475,675 total letters Query= NC_021304.1 Length=51552 Score E Sequences producing significant alignments: (Bits) Value seq3094 136 1e-27 >seq3094 Length=68251 Score = 136 bits (150), Expect = 1e-27 Identities = 196/272 (72%), Gaps = 6/272 (2%) Strand=Plus/Minus Query 40762 GGATCACCTCGCCACGACG--CCGGTCATCGAAGTCGATGTCGACATCGGGCATGGACAC 40819 ||||||||||||| || || || | || |||||||||||||| || ||||| || || Sbjct 58364 GGATCACCTCGCCGCGGCGGTCCTGACA--GAAGTCGATGTCGAAGTCCGGCATCGAGAC 58307 Query 40820 GCGCTCGGGGTTCAGGAACCGCTCGAAGATGAGCCCGTGCTCCAGCGGGTCGAGGTCGGT 40879 ||| |||||||| || || |||||||| | || ||| | | ||| ||||| ||||| Sbjct 58306 GCGTTCGGGGTTGAGAAAGCGCTCGAACAGCAGACCGAACCGGATCGGATCGAGATCGGT 58247 Query 40880 GATCCCGAGGACGTAGGCGACCAGCGAACCGGCCGCAGAGCCTCGCCCAGGGCCGACCCA 40939 ||| || ||||||| |||||||| || || | || || || || || || ||| Sbjct 58246 GATGGTCAGCGCGTAGGCAACCAGCGAGCCTGCGCCCGAACCGCGGCCCGGTCCCACCGG 58187 Query 40940 GACGCCGTTCTCCTTCGCCCAGCGGATGAAGTCCGCGACGACGAGGAAGTACGACGGGA- 40998 | ||| | | ||||||||| ||||||||||| |||| |||||||| | ||||| Sbjct 58186 AATGCCATGCGACTTCGCCCACTTGATGAAGTCCGACACGATCAGGAAGTA-GCCGGGAT 58128 Query 40999 AGCCCATCTGGATGATCATGTCGATCTCGTAC 41030 | ||| | |||| | |||||| ||| || Sbjct 58127 ATTTCATGCGCGTGATGACGTCGATTTCGAAC 58096 Score = 107 bits (118), Expect = 6e-19 Identities = 118/157 (75%), Gaps = 0/157 (0%) Strand=Plus/Minus Query 39812 GAAGTTCACGAACTCCTTGGCCAGAACCTCGGGCTTCTTCTTGCCCATCGCCCGGCGAAG 39871 |||| || || || |||| ||| || || | |||||||||||||||| ||||| || Sbjct 59269 GAAGATCTCGCGCTGCTTGTCCATTTCCGCGCGGATCTTCTTGCCCATCGCGCGGCGCAG 59210 Query 39872 CAGGTCGGCCTGACCGAGGGTGTACCCGGCCATGACCTGTGCAACCTTCTGCACTTGCTC 39931 ||||||||| | ||||| | || |||||||||||||| || | || | ||| || || Sbjct 59209 CAGGTCGGCGTCGCCGAGCGAATAGCCGGCCATGACCTGCGCGATCTGCATCACCTGTTC 59150 Query 39932 CTGGTAGATGATGAGCTGGAAGGTCGGGTCCAGGATC 39968 ||| |||||||||| ||||||| | ||||||| Sbjct 59149 CTGATAGATGATGACGCCGAAGGTCTCCTTCAGGATC 59113 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 144772863919260