Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Picea_20abies_20[ConGenIE_20PRJEB1822-1.0_202015-05-12] 10,253,695 sequences; 12,301,475,675 total letters Query= NC_021339.1 Length=51077 Score E Sequences producing significant alignments: (Bits) Value seq3094 131 5e-26 >seq3094 Length=68251 Score = 131 bits (144), Expect = 5e-26 Identities = 195/272 (72%), Gaps = 6/272 (2%) Strand=Plus/Minus Query 40222 GGATGACCTCGCCACGACG--CCGGTCATCGAAGTCGATGTCGACATCGGGCATGGACAC 40279 |||| |||||||| || || || | || |||||||||||||| || ||||| || || Sbjct 58364 GGATCACCTCGCCGCGGCGGTCCTGACA--GAAGTCGATGTCGAAGTCCGGCATCGAGAC 58307 Query 40280 GCGCTCGGGGTTCAGGAAGCGCTCGAAGATGAGCCCGTGCTCCAGCGGGTCGAGGTCGGT 40339 ||| |||||||| || ||||||||||| | || ||| | | ||| ||||| ||||| Sbjct 58306 GCGTTCGGGGTTGAGAAAGCGCTCGAACAGCAGACCGAACCGGATCGGATCGAGATCGGT 58247 Query 40340 GATCCCGAGGACGTAGGCGACCAGCGAACCGGCCGCAGAGCCCCGCCCAGGGCCGACCCA 40399 ||| || ||||||| |||||||| || || | || || || || || || ||| Sbjct 58246 GATGGTCAGCGCGTAGGCAACCAGCGAGCCTGCGCCCGAACCGCGGCCCGGTCCCACCGG 58187 Query 40400 GACCCCGTTCTCCTTCGCCCAGCGGATGAAGTCCGCGACGACGAGGAAGTACGACGGGA- 40458 | || | | ||||||||| ||||||||||| |||| |||||||| | ||||| Sbjct 58186 AATGCCATGCGACTTCGCCCACTTGATGAAGTCCGACACGATCAGGAAGTA-GCCGGGAT 58128 Query 40459 ACCCCATCTGGATGATCATGTCGATCTCGTAC 40490 | ||| | |||| | |||||| ||| || Sbjct 58127 ATTTCATGCGCGTGATGACGTCGATTTCGAAC 58096 Score = 98.7 bits (108), Expect = 3e-16 Identities = 101/132 (77%), Gaps = 0/132 (0%) Strand=Plus/Minus Query 39272 GAAGTTCACGAACTCCTTGGCCAGAACCTCGGGCTTCTTCTTGCCCATCGCCCGGCGAAG 39331 |||| || || || |||| ||| || || | |||||||||||||||| ||||| || Sbjct 59269 GAAGATCTCGCGCTGCTTGTCCATTTCCGCGCGGATCTTCTTGCCCATCGCGCGGCGCAG 59210 Query 39332 CAGGTCGGCCTGACCCAGGGTGTACCCGGCCATGACCTGTGCAACCTTCTGCACCTGCTC 39391 ||||||||| | || || | || |||||||||||||| || | || | |||||| || Sbjct 59209 CAGGTCGGCGTCGCCGAGCGAATAGCCGGCCATGACCTGCGCGATCTGCATCACCTGTTC 59150 Query 39392 CTGGTAGATGAT 39403 ||| |||||||| Sbjct 59149 CTGATAGATGAT 59138 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 143437943114010