Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Picea_20abies_20[ConGenIE_20PRJEB1822-1.0_202015-05-12] 10,253,695 sequences; 12,301,475,675 total letters Query= NC_021924.1 Length=129052 Score E Sequences producing significant alignments: (Bits) Value seq497574 109 4e-19 seq134495 104 2e-17 seq8389 98.7 7e-16 seq192032 93.3 3e-14 seq109075 93.3 3e-14 seq7627819 87.8 1e-12 seq1015561 87.8 1e-12 seq20028 87.8 1e-12 seq57571 86.0 5e-12 seq7065245 84.2 2e-11 >seq497574 Length=4355 Score = 109 bits (120), Expect = 4e-19 Identities = 161/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGAC 110332 ||||| |||||||| ||||| || || |||||||| || || | ||| ||| | Sbjct 2344 ATGCAGATATTTGTGAAAACGTTGACGGGCAAAACGATCACTCTGGAAGTTGAGAGCTCC 2403 Query 110333 GATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAA 110392 |||||| | | | |||||| ||||||| ||||| ||||| | || ||||| Sbjct 2404 GATACTATTGATAATGTAAAAGCGAAGATTCAGGACAAGGAAGGGATTCCTCCTGATCAG 2463 Query 110393 CAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAAC 110452 || || || || | ||| ||||| ||||||||||||| |||| | || |||||||| Sbjct 2464 CAGAGGCTGATATTTGCTGGTAAGCAGCTGGAGGATGGGCGAACTCTCGCCGATTACAAT 2523 Query 110453 ATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGGA 110500 ||||| || || ||||| | ||| | || || | ||||| || ||| Sbjct 2524 ATTCAGAAGGAGTCTACACTTCACCTCGTCTTGCGTCTGCGTGGTGGA 2571 >seq134495 Length=14222 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGAC 110332 ||||| |||||||| || || || || ||||| ||||| || | || ||| Sbjct 3925 ATGCAGATATTTGTGAAGACGTTGACAGGCAAGACCATCACACTGGAGGTTGAGAGCTCT 3866 Query 110333 GATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAA 110392 |||||| | | | || || ||||||| ||||| ||||| | || |||||| Sbjct 3865 GATACTATTGATAACGTCAAGGCGAAGATTCAAGACAAGGAAGGTATTCCTCCTGATCAA 3806 Query 110393 CAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAAC 110452 || || || |||| |||||| || ||||||||||||| | |||| | || ||||| ||| Sbjct 3805 CAGAGGCTCATTTTTGCGGGCAAGCAGCTGGAGGATGGCCGAACCCTCGCCGATTATAAC 3746 Query 110453 ATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGG 110499 ||||| || |||||||| | ||| | || || | ||||| || || Sbjct 3745 ATTCAGAAGGAATCTACCCTTCACCTTGTCTTGCGTCTGCGTGGTGG 3699 >seq8389 Length=52536 Score = 98.7 bits (108), Expect = 7e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGAC 110332 |||||||||||||| || || || || ||||| |||||||| | || ||| Sbjct 37949 ATGCAAATATTTGTAAAGACCTTGACTGGCAAGACCATTACACTAGAGGTTGAGAGCTCT 37890 Query 110333 GATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAA 110392 ||||| | | | ||||| |||||| ||||| ||||| | ||| ||||| Sbjct 37889 GATACGATTGATAATGTAAAGGCTAAGATTCAGGACAAGGAAGGAATTCCCCCTGATCAG 37830 Query 110393 CAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAAC 110452 || || || |||| ||| || || ||||||||||||| |||| | || |||||||| Sbjct 37829 CAGAGGCTCATTTTTGCAGGCAAGCAGCTGGAGGATGGGCGAACCCTTGCTGATTACAAT 37770 Query 110453 ATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGG 110499 ||||| || ||||| || | ||| | || ||| | ||||| || || Sbjct 37769 ATTCAGAAGGAATCCACCCTCCACCTTGTCTTACGTCTGCGTGGTGG 37723 >seq192032 Length=10632 Score = 93.3 bits (102), Expect = 3e-14 Identities = 102/136 (75%), Gaps = 0/136 (0%) Strand=Plus/Minus Query 110366 GACAAAGAAGGCGTGCCCGTGGATCAACAAAGACTTATTTATGCGGGTAAACAGCTGGAG 110425 ||||| |||||| | | || || ||||| ||||||| ||| ||||| ||| ||||| Sbjct 3458 GACAAGGAAGGCCCACTCCCAGAGCAGCAAAGGCTTATTTTTGCTGGTAAGCAGTTGGAG 3399 Query 110426 GATGCCAGAACAATGGCGGATTACAACATTCAAAAAGAATCTACGTTGCACATGGTGTTA 110485 |||| ||| ||| |||| |||||||||||||| || ||||| || | || | ||| | Sbjct 3398 GATGGCAGGACATTGGCCGATTACAACATTCAGAAGGAATCGACCCTATACCTCGTGCTT 3339 Query 110486 AGACTGCGAGGGGGAA 110501 | ||| |||| |||| Sbjct 3338 CGTCTGAGAGGTGGAA 3323 >seq109075 Length=16623 Score = 93.3 bits (102), Expect = 3e-14 Identities = 159/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGC-CTGA 110331 ||||| || ||||||||||| | || ||||| || ||||| | ||| ||| || | Sbjct 11104 ATGCAGATCTTTGTCAAAACCCTGACTGGCAAGACGATTACTTTGGAAGTTGAGAGCTCA 11163 Query 110332 CGATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCA 110391 || || | | | ||||| ||||| ||||| |||||| | ||| || || Sbjct 11164 -GACACCATTGATAATGTAAAGGCCAAGATCCAGGACAAGGAAGGCATACCCCCTGACCA 11222 Query 110392 ACAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAA 110451 || || ||||| | ||| ||||| ||||||||||||| | || |||| |||||||| Sbjct 11223 GCAGAGGCTTATCTTTGCCGGTAAGCAGCTGGAGGATGGGCGGACCTTGGCTGATTACAA 11282 Query 110452 CATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGG 110499 ||||| || ||||| || ||||| | ||| | | ||| |||| || Sbjct 11283 TATTCAGAAGGAATCAACCCTGCACCTTGTGCTTCGTCTGAGAGGTGG 11330 >seq7627819 Length=243 Score = 87.8 bits (96), Expect = 1e-12 Identities = 101/136 (74%), Gaps = 0/136 (0%) Strand=Plus/Minus Query 110366 GACAAAGAAGGCGTGCCCGTGGATCAACAAAGACTTATTTATGCGGGTAAACAGCTGGAG 110425 ||||| |||||| | | || || ||||| ||||||| || ||||| ||| ||||| Sbjct 136 GACAAGGAAGGCCCACTCCCAGAGCAGCAAAGGCTTATTTTTGTTGGTAAGCAGTTGGAG 77 Query 110426 GATGCCAGAACAATGGCGGATTACAACATTCAAAAAGAATCTACGTTGCACATGGTGTTA 110485 |||| ||| ||| |||| |||||||||||||| || ||||| || | || | ||| | Sbjct 76 GATGGCAGGACATTGGCCGATTACAACATTCAGAAGGAATCGACCCTATACCTCGTGCTT 17 Query 110486 AGACTGCGAGGGGGAA 110501 | ||| |||| |||| Sbjct 16 CGTCTGAGAGGTGGAA 1 >seq1015561 Length=2156 Score = 87.8 bits (96), Expect = 1e-12 Identities = 148/210 (70%), Gaps = 6/210 (3%) Strand=Plus/Plus Query 110270 AAAATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGA-AACG-GAGC 110327 || ||||| || ||||||||||| | || ||||| || || || |||| || |||| Sbjct 1732 AAGATGCAGATCTTTGTCAAAACCCTCACTGGCAAGACAATCACTCTCGAGGTCGAGAGC 1791 Query 110328 -CTGACGATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTG 110386 ||||| || | | | | ||||| |||||| ||||| |||||| | ||| Sbjct 1792 TCTGAC---ACCATTGACAATGTAAAGGCGAAGATCCAGGACAAGGAAGGCATCCCCCCT 1848 Query 110387 GATCAACAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGAT 110446 ||||| ||| | || || | ||| || || ||||| || |||| | |||| | || ||| Sbjct 1849 GATCAGCAACGTCTGATCTTTGCTGGAAAGCAGCTCGAAGATGGCCGAACCCTTGCCGAT 1908 Query 110447 TACAACATTCAAAAAGAATCTACGTTGCAC 110476 ||||| || ||||| ||||| || ||||| Sbjct 1909 TACAATATCCAAAAGGAATCCACCCTGCAC 1938 >seq20028 Length=39891 Score = 87.8 bits (96), Expect = 1e-12 Identities = 158/230 (69%), Gaps = 6/230 (3%) Strand=Plus/Minus Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGC---CT 110329 ||||| |||||||||||||| | ||||| || || || || | ||| ||| || Sbjct 30443 ATGCAGATATTTGTCAAAACCCTTACCGGAAAGACAATCACTTTGGAAGTTGAGAGCTCT 30384 Query 110330 GACGATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGAT 110389 ||| || | | | || || ||||| || || ||||| | ||| |||| Sbjct 30383 GAC---ACCATTGATAATGTTAAGGCCAAGATCCAGGATAAGGAAGGAATTCCCCCGGAT 30327 Query 110390 CAACAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTAC 110449 || || || || || | ||| ||||| ||||||||||| | ||| || |||| || ||| Sbjct 30326 CAGCAGAGGCTAATCTTTGCTGGTAAGCAGCTGGAGGACGGCAGGACCTTGGCTGACTAC 30267 Query 110450 AACATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGG 110499 |||||||| || ||||| || ||||| | ||| | | ||| |||| || Sbjct 30266 AACATTCAGAAGGAATCAACCCTGCACCTTGTGCTTCGTCTGAGAGGTGG 30217 >seq57571 Length=25446 Score = 86.0 bits (94), Expect = 5e-12 Identities = 156/227 (69%), Gaps = 1/227 (0%) Strand=Plus/Plus Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGAC 110332 |||||||||||||| || || || || ||||| || ||||| | || ||| | Sbjct 2469 ATGCAAATATTTGTAAAGACCTTGACTGGCAAGACAATTACACTAGAGGTTGAGAGATAT 2528 Query 110333 GATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAA 110392 ||||| | | | ||||| |||||| ||||| |||| | ||| | |||||| Sbjct 2529 GATACGATTGATAATGTAAAGGCTAAGATTCGGGACAAGGAAGCTTTTCCCCT-GATCAA 2587 Query 110393 CAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAAC 110452 || || || |||| ||| || || || |||||||||| |||| | || ||||||| Sbjct 2588 CAGAGGCTCATTTTTGCAGGCAAGCAACTGGAGGATGGGCGAACCCTTGCTAATTACAAT 2647 Query 110453 ATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGG 110499 ||| | || ||||| || | ||| | || ||| | ||||||| || Sbjct 2648 ATTAAGAAGGAATCCACCCTCCACCTTGTCTTATGTATGCGAGGTGG 2694 >seq7065245 Length=256 Score = 84.2 bits (92), Expect = 2e-11 Identities = 126/175 (72%), Gaps = 3/175 (2%) Strand=Plus/Minus Query 110264 AGATTT-AAAATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAAC 110322 |||||| |||||||| ||||| || || || || ||||| || ||||| || || || Sbjct 183 AGATTTCAAAATGCAGATATTCGTGAAGACATTGACCGGAAAGACCATAACTGTTGAGGT 124 Query 110323 GGAGC-CTGACGATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGC 110381 |||| || | |||||| | | | || || |||||| ||||| || || | | Sbjct 123 GGAGAGCTCA-GATACTACTGACAATGTGAAGGCGAAGATCCAGGACAAGGAGGGAATTC 65 Query 110382 CCGTGGATCAACAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAAC 110436 || ||||||||||| || |||| ||| || |||||||| ||||||| | |||| Sbjct 64 CCCCTGATCAACAAAGGCTCATTTTTGCTGGCAAACAGCTTGAGGATGGCCGAAC 10 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 361250061831635