Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Picea_20abies_20[ConGenIE_20PRJEB1822-1.0_202015-05-12] 10,253,695 sequences; 12,301,475,675 total letters Query= NC_022266.1 Length=31967 Score E Sequences producing significant alignments: (Bits) Value seq416950 307 2e-79 seq1393656 118 2e-22 >seq416950 Length=5269 Score = 307 bits (340), Expect = 2e-79 Identities = 1087/1678 (65%), Gaps = 49/1678 (3%) Strand=Plus/Plus Query 5207 TCCCAGAGCTCGGTGACGTGTTCTACGGCA-TCTCGATCCAGCAGACTTCTTGGTTGCGG 5265 ||||| || || | || ||||| |||||| | || ||||| || || || | ||| | Sbjct 340 TCCCACAGTTCTTTTACATGTTCCACGGCAGTGTC-ATCCAACATACATCGTTGTTTCTT 398 Query 5266 GGGTTGGGGCGGCTTTGGCTGTAGGGGACCAGCCGGTGCGCGTCCAGGGAGGCGAGGGTG 5325 ||||| || | ||| | ||| || | ||| ||||| |||| | | | ||||| Sbjct 399 GGGTTTGGTTGCTTTTCGA-GTAAGGCATCAGGCGGTGGCCGTCTATGTCTACAAGGGTC 457 Query 5326 ACGTCTTTCCAGGGCCGCAGCGTTCGCGTGAGGGTGGTCTCGGTGACGGTGAA--GGGAT 5383 ||||||||| |||| || || ||||| | || || |||||||| ||||| ||| Sbjct 458 TTGTCTTTCCAAGGCCTCACTGTGCGCGTTAAAGTTGTTTCGGTGACTGTGAACGGGGCC 517 Query 5384 GCGCTCCCGGTTGGGCGCTGGCCAGGGTCCTCTTGAGACTCATCCTGCTGGTGTGGAAGC 5443 ||| | | |||| | || ||||||| || | ||||| | ||||||||| |||| Sbjct 518 GCGTTGCT--TTGGTTCGTAGCGAGGGTCCGTTTTAAACTCAGGCGGCTGGTGTGAAAGC 575 Query 5444 G--GGCGTCTTCTCCCTGGGAGTCGGCCAGGTAGCATTTGAGCATGAG-GTCGTAGCTGA 5500 | ||| || || | || | ||| | || ||||||||| ||| || ||| || | | Sbjct 576 GCTGGC-TCCCCTGC-TGCGCGTCAGACAAGTAGCATTT-AGCCAAAGTGTCATAACATA 632 Query 5501 GGGCCTCGGCCGCGTGGCCCTTGGCGCGCAGCTTGCCTTTGGAGACGTGTCCGCAGGCGG 5560 | | || || ||||| || ||||| || ||||| || || || ||| | Sbjct 633 ATTCAGTAGTTGCATGACCCTTCGCCCGCAGTTTACCTTTACCCACATGCCCACAGCAAG 692 Query 5561 GACAGTGCAG-GCACTTGAGGGCGTAGAGCTTGGGGGCCAGGAAGACGGACTCGGGGGAG 5619 ||| ||| | || | || || || || || || || ||||| || || | Sbjct 693 TACAAA-CAGTGTTTTTTAAAGCATACAGTTTAGGAGCGAGAAAGACAGATTCAGAACTA 751 Query 5620 TAGGCGTCGGCGCCGCACTGAGCGCACGTGGTCTCGCACTCGACGAGCCAGGTGAGCTCC 5679 | || || | || | | ||| ||||| || || || | ||| || | Sbjct 752 AAAGCATCAGACTTACATTTTTCACACTGAGTCTCACATTCAACCAACCATGTAATAGAT 811 Query 5680 GGGTGTTGGGGATCAAAAACCAGCTGGCCCCCGTGTTTTTTGATGCGCTTCTTACCTCGG 5739 |||| || ||||||||||| |||| || || | ||| || ||||| | ||||||| Sbjct 812 GGGTTTTTTGGATCAAAAACTAGCTTCCCTCCATTTTTCTTAATGCGGTGTTTACCTCTT 871 Query 5740 GTCTCCATGAGGCGGCGTCCGGCTTCGGTGACGAAGAGGCTGTCGGTGTCGCCGTAGACG 5799 ||||||||| ||| | || ||||||| || || | |||||| ||||| |||||||| Sbjct 872 TGCTCCATGAGCCGGTGCCCCTCTTCGGTCACAAACAAGCTGTCAGTGTCCCCGTAGACA 931 Query 5800 GATTTGAGCGCGCGCTGCTCCAGGGGAATCCCGCGATCCTCCGCGTGCAGGAACTCGGAC 5859 ||||| | | || | || || | || | || || |||| | || || | | Sbjct 932 GATTTTATAGTTTTTTGATGTAGTGGCTTTCCTCTGTCTTCGGCGTATAAAAATTCTGCC 991 Query 5860 CACTCTGAGACGAAGGCCCGGGTCCACGCGAGGACAAAGGAGGCGATCTGGGACGGGTAG 5919 ||||| || || || | | ||||| || | ||||| || || || ||||| | ||| Sbjct 992 CACTCAGACACAAATACTCTAGTCCAGGCCAAAACAAACGAAGCAATGTGGGAAGCGTAC 1051 Query 5920 CGGTCGTTCTCCACCAGGGGATCCACCTTCTCCAGGGTGTGCAGGCAGAGGTCGTCCTCC 5979 | || ||| || | | ||| || || | ||||| | ||| | ||| || || Sbjct 1052 CTGTTGTTTTCTATTAAAGGAGAGTTGTTTTCTAAAGTGTGTAAGCATATGTCATCATCT 1111 Query 5980 TCCGCGTCCATGAAGGTGATTGGCTTGTAAGTGTATGTCACGTGACCGTCGGGGTCGCGC 6039 || | || | || ||||||||||| || | ||||||||||||| || Sbjct 1112 TCAGTTTCTAAAAACGTGATTGGCTTATACTTATATGTCACGTGACTATCTT-------- 1163 Query 6040 GTGGGCTTATAAAAGGGGGCGTGCCCGGCCTCCCCGTCACTTTCTTCCGCATCGCTGTGG 6099 |||| ||||||| ||| |||| | | | | |||||||| || ||| Sbjct 1164 -TGGG--TATAAAAAGGGT-GTGCTCTTCGTTTTCATCACTTTCATCTAACTCGGC---- 1215 Query 6100 ACGAGATCCAGCTGCTCGGGTGAGTAGGCGCGCTGGAAGGCGGGCATGACCTCGGCGCTG 6159 ||| || ||| |||| ||| || || | ||||| | || || || Sbjct 1216 ---AGA---AGGTGCA--GGTGGGTAAGCTACGACAAATTCTGGCATAATTTCAGCACTA 1267 Query 6160 AGGGTGTCAGTTTCCACGAACGAGGTGGATTTGATATTGACCTGTCCGGCGGCGATGCTT 6219 | | |||||||||| | ||| || | |||||||| | | || ||||||| || Sbjct 1268 AAGTTGTCAGTTTCTATGAATGATGAAGATTTGATGGAAAAGTTACCTCTGGCGATGGTT 1327 Query 6220 TT-GACGGTGGCGGGGTCCATCTGGTCAGAAAAGACGATCTTTTTGTTGTCCAGCTTGGT 6278 || |||| | || || | ||||| ||||| || || ||||||||||||| || || Sbjct 1328 TTTGACGC-GCTGGCTTCTAGTTGGTCTGAAAACACAATTTTTTTGTTGTCCAATTTAGT 1386 Query 6279 GGCGAACGACCCGTAGAGGGCGTTGGAGAGCAGCTTGGCGATGGAGCGCAGGGTCTGGTT 6338 ||| || || || | ||||||||| || ||||| || ||| |||| ||| ||||| Sbjct 1387 GGCAAAGCTGCCATATAAGGCGTTGGAAAGTAGCTTAGCTATGCTTCGCATGGTTTGGTT 1446 Query 6339 CTTCTCGCGGTCGGCGCGCTCCTTGGCGGCGATGTTGAGCTGGACGTACTCGCGGGCCAC 6398 ||| || ||| || || ||||| ||||||| ||||| ||||| || |||||| Sbjct 1447 CTTTTCTTTGTCTGCTTTTTCTTTGGCTCCGATGTTTAGCTGCACGTATTCTTTGGCCAC 1506 Query 6399 GCAGCGCCATTCGGGGAAGACGGTGGCGCGCTCGTCCGGCAGGAGGCGCACGCGCCAGCC 6458 ||| ||| || ||||||| ||| | | ||||| || || | |||||| ||| || Sbjct 1507 GCACTTCCACTCTGGGAAGATGGTTGTTCTTTCGTCTGGAAGAATGCGCACTGCCCATCC 1566 Query 6459 GCGGTTGTGCAGGGTGATGAGGTCCACGCTGGTGGCCACCTCGCCGCGCAGTGGCTCGTT 6518 | |||||||| || || | ||| | || || || || || |||| |||||||| Sbjct 1567 TCTGTTGTGCAAAGTAATCAAGTCTATAGAAGTAGCTACTTCTCCTCGCAAAGGCTCGTT 1626 Query 6519 GGTCCAGCAGAGGCGCCCGCCCTTGCGCGAGCAGAAGGGGGGCAGGACGTCGAGCTGGTC 6578 |||||||| || | ||||| || | ||||| || || ||||| | || || Sbjct 1627 AGTCCAGCACAGCCTTCCGCCTTTTCTGGAGCAAAACGGAGGCAGTTCATCAAGAAACAA 1686 Query 6579 CTCCGCgggggggTCGGCGTCGATGGTGAAGATGCCCGGTAGCAGGTGGCGGTCGAAGTA 6638 ||| | || || || |||||||||||||| ||||| || || || ||| || || Sbjct 1687 CTCGTCTGGAGGATCCGCGTCGATGGTGAAAATGCCTGGAAGAAGACACTCGTCAAAATA 1746 Query 6639 GTCGATGGCGACCGCGGGGTCGGCGAGGGCGCGTTC----CCAGTCCCTGACCGCCAGGG 6694 ||| || | | || | | || ||| ||| || | | || | || Sbjct 1747 GTCAATTTTTTGCTCTAAGTTTTCAA----GCTTTCTGATCCATTCTGTCGCAGCTAAGG 1802 Query 6695 CGCGCTCGTAGGGGTTGAGGGGCGCCCCCCAGGGCATGGGATGGGTGAGGGCCGAGGCGT 6754 | | || || || || | ||| ||| | ||| | ||||| || || || ||| | Sbjct 1803 CTCTTTCATACGGATTTAAAGGCTGCCCGCTGGGAAAAGGATGCGTTAGAGCACTGGCAT 1862 Query 6755 ACATGCCGCAGATGTCGTAGACGTAGAGGGGCTCGCGGAGCACGCCGAGGTAGGTGGGAT 6814 |||||||||||||||| || || || | |||| | | ||| | || ||||||| Sbjct 1863 ACATGCCGCAGATGTCATACACATAAATTGGCTGTTCCATGATGCCAATATAAGTGGGAT 1922 Query 6815 AGCAGCGTCCGCCGCGGATGCTGGCGCGCACGTAGTCGTACATCTCGTGCGAGGGGGC 6872 ||||||| || || |||||||| ||| |||||||| ||||| || || || || || Sbjct 1923 AGCAGCGACCACCACGGATGCTCTGGCGGACGTAGTCATACATTTCATGAGATGGTGC 1980 Score = 122 bits (134), Expect = 2e-23 Identities = 374/573 (65%), Gaps = 8/573 (1%) Strand=Plus/Plus Query 8738 GCGGTTGAGGTCCTGGATGTGCCTCCGCTGCGTGAAGACCACCGGTCCCCGGACTCGGAA 8797 |||||||| || ||| || | || | | | || ||||| || || |||| ||| Sbjct 3690 GCGGTTGATGTTCTGAATCTCCCGCAGGCCGGAAAATACCACTGGGCCGGTCACTCTGAA 3749 Query 8798 CCTGAAAGAGAGTTCGACAGAATCAATCTCGGCATCGTTGACGGCCGCCTGACGCAGGAT 8857 ||||||||| | ||| | ||| ||||| || || || || || ||| | || | || Sbjct 3750 CCTGAAAGATATTTCCATAGAGTCAATGTCTGCGTCATTAACTGCCACTTGCTTTAAAAT 3809 Query 8858 CTCCTGCACGTCGCCCGAGTTGTCCTGGTAGGCGATCTCGGACATGAACTGGTCGATCTC 8917 ||| |||||| || ||| || || || || || || | ||| ||||| || ||||| Sbjct 3810 CTCACTCACGTCTCCGCTGTTATCGTGATAAGCTATTTCTGCCATAAACTGCTCAATCTC 3869 Query 8918 TTCCTCCTGGAGTTCGCCGCGTCCGGCGCGTTCGACGGTGGCCGCGAGGTCGTTGGAGAT 8977 ||||| || | || || | || || | || || ||||| || | ||| || || Sbjct 3870 TTCCTGCTCTAACTCTCCTCTCCCTGCTCTCTCAACTGTGGCAGCCAAGTCAATGCTAAT 3929 Query 8978 GCGAGCCATGA-GCTGGGAGAAGGC-GTTGAGGCCGTTCTCGTTCCACACGCGACTGTAG 9035 ||||| ||||| | | | ||| | ||| || || || |||||||| | ||||| Sbjct 3930 GCGAGACATGATGTTACTAAAAGCCTGTT--CCCCATTTTCATTCCACACTCTGCTGTAC 3987 Query 9036 ACGACGTTGCCGACGGCGTCCCGGGCGCGCATGACCACCTGCGCGACGTTGAGCTCCACG 9095 || | | || | ||| | ||| | ||| || |||||||| | || ||| ||| Sbjct 3988 ACAATTTGTCCATCTTCGTTTCTGGCTCTCATTACTACCTGCGCCAGATTAAGCATCACA 4047 Query 9096 TGTCGCGCGAAGACGGCGTAGTTGCGC--AGGCGCTGGAAGAGGTAGTTGAGGGTGGTGG 9153 | || | | | | || | || | | | | | || | |||||| || ||||| | Sbjct 4048 TATCTCCC--AAAAGGGGAAGATACCCTAATTTGGTGATTTAAGTAGTTTAGTGTGGTAG 4105 Query 9154 CGATGTGCTCGCAGACGAAGAAGTACATGACCCAGCGGCGCAGCGTCATCTCGTTGATGT 9213 | ||||| || || || ||| |||| |||||||| | || || | || || |||| Sbjct 4106 CAATGTGTTCTGCCACAAAAAAGAACATCACCCAGCGTTGGAGAGTTGTTTCATTAATGT 4165 Query 9214 CTCCGAGGGCTTCCAAGCGCTCCATGGCCTCGTAGAAGTCGACGGCGAAGTTGAAGAACT 9273 | || || || ||||| |||| || |||| || || | || || ||||| || |||| Sbjct 4166 CACCTAGCGCCTCCAAACGCTGAATAACCTCATAAAAATTTACAGCAAAGTTAAAAAACT 4225 Query 9274 GGGAGTTGCGCGCCGCGACCGTCAGCTCGTCTT 9306 | ||| | || | || || ||||| |||| Sbjct 4226 GCTGGTTTCTAGCAGACACAGTGAGCTCTTCTT 4258 >seq1393656 Length=1543 Score = 118 bits (130), Expect = 2e-22 Identities = 353/539 (65%), Gaps = 8/539 (1%) Strand=Plus/Plus Query 8772 AAGACCACCGGTCCCCGGACTCGGAACCTGAAAGAGAGTTCGACAGAATCAATCTCGGCA 8831 || ||||| || || |||| |||||||||||| | ||| | ||| ||||| || || Sbjct 32 AATACCACTGGGCCGGTCACTCTGAACCTGAAAGATATTTCCATAGAGTCAATGTCTGCG 91 Query 8832 TCGTTGACGGCCGCCTGACGCAGGATCTCCTGCACGTCGCCCGAGTTGTCCTGGTAGGCG 8891 || || || ||| | || | ||||| |||||| || ||| || || || || Sbjct 92 TCATTAACTGCCACTTGCTTTAAAATCTCACTCACGTCTCCGCTGTTATCGTGATAAGCT 151 Query 8892 ATCTCGGACATGAACTGGTCGATCTCTTCCTCCTGGAGTTCGCCGCGTCCGGCGCGTTCG 8951 || || | ||| ||||| || |||||||||| || | || || | || || | || Sbjct 152 ATTTCTGCCATAAACTGCTCAATCTCTTCCTGCTCTAACTCTCCTCTCCCTGCTCTCTCA 211 Query 8952 ACGGTGGCCGCGAGGTCGTTGGAGATGCGAGCCATGA-GCTGGGAGAAGGC-GTTGAGGC 9009 || ||||| || | ||| || ||||||| ||||| | | | ||| | ||| | Sbjct 212 ACTGTGGCAGCCAAGTCAATGCTAATGCGAGACATGATGTTACTAAAAGCCTGTT--CCC 269 Query 9010 CGTTCTCGTTCCACACGCGACTGTAGACGACGTTGCCGACGGCGTCCCGGGCGCGCATGA 9069 | || || |||||||| | ||||| || | | || | ||| | ||| | ||| | Sbjct 270 CATTTTCATTCCACACTCTGCTGTACACAATTTGTCCATCTTCGTTTCTGGCTCTCATTA 329 Query 9070 CCACCTGCGCGACGTTGAGCTCCACGTGTCGCGCGAAGACGGCGTAGTTGCGC--AGGCG 9127 | |||||||| | || ||| ||| | || | | | | || | || | | | | | Sbjct 330 CTACCTGCGCCAGATTAAGCATCACATATCTCCC--AAAAGGGGAAGATACCCTAATTTG 387 Query 9128 CTGGAAGAGGTAGTTGAGGGTGGTGGCGATGTGCTCGCAGACGAAGAAGTACATGACCCA 9187 || | |||||| || ||||| || ||||| || || || ||| |||| ||||| Sbjct 388 GTGATTTAAGTAGTTTAGTGTGGTAGCAATGTGTTCTGCCACAAAAAAGAACATCACCCA 447 Query 9188 GCGGCGCAGCGTCATCTCGTTGATGTCTCCGAGGGCTTCCAAGCGCTCCATGGCCTCGTA 9247 ||| | || || | || || ||||| || || || ||||| |||| || |||| || Sbjct 448 GCGTTGGAGAGTTGTTTCATTAATGTCACCTAGCGCCTCCAAACGCTGAATAACCTCATA 507 Query 9248 GAAGTCGACGGCGAAGTTGAAGAACTGGGAGTTGCGCGCCGCGACCGTCAGCTCGTCTT 9306 || | || || ||||| || ||||| ||| | || | || || ||||| |||| Sbjct 508 AAAATTTACAGCAAAGTTAAAAAACTGCTGGTTTCTAGCAGACACAGTGAGCTCTTCTT 566 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 90062182190050