Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Picea_20abies_20[ConGenIE_20PRJEB1822-1.0_202015-05-12] 10,253,695 sequences; 12,301,475,675 total letters Query= NC_022330.1 Length=76586 Score E Sequences producing significant alignments: (Bits) Value seq2171 298 2e-76 >seq2171 Length=73796 Score = 298 bits (330), Expect = 2e-76 Identities = 579/850 (68%), Gaps = 21/850 (2%) Strand=Plus/Plus Query 66125 GACGTCATTCCCACCGGCTCTATCGCTCTGGACGGCGCTCTGGGCATCGGGGGGTACCCG 66184 || |||||||| | ||||| | | ||||| ||| || ||| |||| || ||| Sbjct 10848 GAGGTCATTCCGTCGGGCTCGCTTGGGCTGGATATCGCGCTCGGCGTCGGCGGTCTGCCG 10907 Query 66185 AGGGGCCGGGTGGTGGAAATCTACGGCCCAGAATCTTCAGGGAAGTCAACTCTGTGTCTC 66244 | ||| |||||||| || |||||||| || ||||| || || ||| | || || || Sbjct 10908 AAGGGACGGGTGGTCGAGATCTACGGGCCGGAATCCTCCGGCAAGACCACGCTCGCGCTG 10967 Query 66245 CACGCGGTGGCCAATGCGCAGAAGGCCGGTGGCAACGCCGCCTACATCGACGCTGAGCAC 66304 || |||||||| | || |||||| || |||| | ||||| |||||||| || ||| Sbjct 10968 CATACGGTGGCCGAAGCCCAGAAGAAAGGCGGCATCTGCGCCTTTATCGACGCCGAACAC 11027 Query 66305 TCCCTGGACCCCGAGTACGCCAAGGCGCTCGGTGTGGACCTCGACAACCTCGTGGTGGTT 66364 | || || || | || ||| |||||| || | |||| | || || | Sbjct 11028 GCGCTCGATCCGGTCTATGCCCGCAAGCTCGGCGTCAATGTCGATGAACTTCTGATTTCG 11087 Query 66365 CAGCCGGACACTGGCGAGCAGGCCCTGGAGATCGTTGACCTCCTCGTCAAGTCTGGCGAG 66424 ||||| ||| ||||||||||| ||||| |||| ||| || || || |||| | Sbjct 11088 CAGCCCGACCACGGCGAGCAGGCGCTGGAAATCGCCGACACGCTGGTGCGCTCGGGCGCG 11147 Query 66425 CTGTCCATCGTCG--TCGTTGACTCTGTGGCGGCCCTGGTGCCGCGCGCCGAGCTCGAAG 66482 ||| || | |||| ||||| |||||||| ||||||||||||||||| ||||| | Sbjct 11148 --GTCGATGTGCTGATCGTGGACTCGGTGGCGGCGCTGGTGCCGCGCGCCGAACTCGAGG 11205 Query 66483 GCGACATCGGGGACAGTCACGTCGGCCTGCACGCGCGCCTCATGTCGCAGGCCATGCGCA 66542 | || || || ||| | || |||| ||||| || ||| ||||| |||||| Sbjct 11206 GTGAGATGGGCGACGCGCTGCCGGGATTGCAGGCGCGACTGATGAGCCAGGCGCTGCGCA 11265 Query 66543 AGCTCACTGGCACCATCTCCAGCACCAACACGCTGACGCTCTGGGTCAACCAGTTGCGCG 66602 |||| || | | | ||| || || | || || | ||| |||||||| | ||| Sbjct 11266 AGCTGACCGCCTCGATCAACAAGTCCCATACCATGGTGATCTTCATCAACCAGATCCGCA 11325 Query 66603 AGAAGATCGGCAACGTGGGCTACGGCCCGAATGAGACCACCACGGGCGGAAAGGCTTTGA 66662 ||||||||| ||| |||||| || || |||||||| ||||| || || ||| Sbjct 11326 TGAAGATCGGT---GTGATGTACGGCTCGCCGGAAACCACCACCGGCGGCAATGCGCTGA 11382 Query 66663 GGTTCTACGCCTCAGTCCGCATGGATGTCCGTCGCATCGCCACCGA-GAAGGAAGGCGAT 66721 |||||||||||| || ||| | ||| |||| ||||||| | | || ||||| |||| Sbjct 11383 AGTTCTACGCCTCGGTGCGCCTCGATATCCGCCGCATCGGC-CAGATCAAGGAGCGCGAC 11441 Query 66722 GAGGCTGTCGGCAACCGCACCCGGGTGAAAGTCGTCAAGAACAAGCTGGCCCCGCCGCAC 66781 || | ||||||||| |||||||| || || || |||||||||||||| |||||| | Sbjct 11442 GAAGTCGTCGGCAACTCGACCCGGGTCAAGGTGGTGAAGAACAAGCTGGCGCCGCCGTTC 11501 Query 66782 CGCAACGCCGAGTTCTCCGTCGTGTACGGGGAGGGCATCTCGCGTGAGGTCGAACTCCTC 66841 | | ||| ||| | || ||||||| |||||| ||||| || |||| ||||| Sbjct 11502 AAGCAGGTCGAATTCGACATCATGTACGGCGAGGGCGTCTCGAAGATGGGCGAAATCCTC 11561 Query 66842 GACCTGGCCGTGTCGCAGGGCCTGGTGAAGAAGTCGGGCGCCTGGTTCAAGTACGGGGAC 66901 ||||| | ||| | ||| | || ||||||| || ||||||||| |||| | Sbjct 11562 GACCTCGGCGTCAAGGCCGGCATCGTCGAGAAGTCCGGTGCCTGGTTCTCCTACGATAGC 11621 Query 66902 AAGAACGTCGCTCAGGGC------AAGCCCAAGGCCGTCCAGTGGCTCAAGGCCAACCCG 66955 || | ||| |||||| || ||||||| || |||||||| ||||| Sbjct 11622 CAGCGCCTCGGGCAGGGCCGCGAGAATTCCAAGGC------GTTCCTCAAGGCGAACCCC 11675 Query 66956 GACATCACCG 66965 || || |||| Sbjct 11676 GAGATTACCG 11685 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 214339705944565