Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Picea_20abies_20[ConGenIE_20PRJEB1822-1.0_202015-05-12] 10,253,695 sequences; 12,301,475,675 total letters Query= NC_023426.1 Length=245717 Score E Sequences producing significant alignments: (Bits) Value seq544196 93.3 6e-14 seq134495 93.3 6e-14 seq111374 91.5 2e-13 seq8389 89.7 7e-13 >seq544196 Length=3977 Score = 93.3 bits (102), Expect = 6e-14 Identities = 139/196 (71%), Gaps = 1/196 (1%) Strand=Plus/Minus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 ||||||||||||| || | || || ||||| || || | | |||| || || | Sbjct 1366 TGCAAATATTCATGAAGATGTTGAC-GGAAAGACCATAAATCTTGAGGTTGAGAGCTCTG 1308 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 |||| ||| | ||||| || ||| || ||| || ||||| ||||| || ||||||| Sbjct 1307 ATACGATTGATAATGTCAAGGCTAAGATTCAAGACAAGGAAGGTATTCCTCCTGATCAAC 1248 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 | || |||||||||| || || ||| | || ||| |||| || | |||||||||| Sbjct 1247 AGAGGCTCATTTTTGTGGGCAAGCAACTGGAGGATGGCCGAACCCTAGCCGATTATAATA 1188 Query 146212 TACAAAAAGAATCGAC 146227 | || || ||||| || Sbjct 1187 TTCAGAAGGAATCTAC 1172 >seq134495 Length=14222 Score = 93.3 bits (102), Expect = 6e-14 Identities = 141/198 (71%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGA-ACATAAC 146090 |||| |||||| | || || || || ||||| || || ||| |||| || || | | | Sbjct 4711 TGCAGATATTCGTGAAGACGTTGACCGGAAAGACCATAACTCTTGAGGTTGAGAGCTCA- 4653 Query 146091 GATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAA 146150 ||||||||| | ||||| || || || || || || || ||||| |||||||| Sbjct 4652 GATACTATTGACAATGTGAAGGCGAAGATCCAGGACAAGGAGGGAATTCCTCCCGATCAG 4593 Query 146151 CAAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAAT 146210 || || ||||||||||| || ||||| | || ||| |||| | |||||||||| Sbjct 4592 CAGAGGCTCATTTTTGCTGGCAAACAGCTTGAGGATGGCCGAACCCTCGCAGATTATAAC 4533 Query 146211 ATACAAAAAGAATCGACT 146228 || || || ||||| ||| Sbjct 4532 ATCCAGAAGGAATCCACT 4515 >seq111374 Length=16363 Score = 91.5 bits (100), Expect = 2e-13 Identities = 140/197 (71%), Gaps = 2/197 (1%) Strand=Plus/Minus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGA-ACATAAC 146090 |||| || || | ||||| |||| || || ||||||||| |||| || || | | | Sbjct 8351 TGCAGATCTTTGTCAAAACTCTAACTGGGAAGACAATTACTCTTGAGGTTGAGAGCTCA- 8293 Query 146091 GATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAA 146150 ||||| || | |||||||| ||||| ||| || ||||| ||||| || ||||| Sbjct 8292 GATACCATCAACAATGTAAAGGCCAAAATTCAAGACAAGGAAGGAATTCCCCCAGATCAG 8233 Query 146151 CAAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAAT 146210 || ||| | || ||||| || || || | || ||| |||| || | | ||||||||| Sbjct 8232 CAGAGATTGATCTTTGCTGGAAAGCAGCTTGAAGATGATAGGACTCTGGCTGATTATAAT 8173 Query 146211 ATACAAAAAGAATCGAC 146227 || || || ||||| || Sbjct 8172 ATCCAGAAGGAATCCAC 8156 Score = 89.7 bits (98), Expect = 7e-13 Identities = 138/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 |||| ||||| | || ||||| || ||||| || || ||| | || ||||| | | Sbjct 8807 TGCAGATATTTGTGAAGACATTGACTGGAAAGACTATAACTCTGGAGGTAGAGAGTTCTG 8748 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 | || ||| | ||||| ||| || || ||| || ||||||||||| || || || | Sbjct 8747 ACACGATTGATAATGTGAAAGCCAAGATTCAAGACAAGGAAGGCATTCCTCCTGACCAGC 8688 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 || ||||||| ||||| || || || || || ||| | || | | ||||| |||| Sbjct 8687 AACGACTCATATTTGCTGGAAAGCAGTTGGAGGATGGACGGACCCTTGCTGATTACAATA 8628 Query 146212 TACAAAAAGAATCGACT 146228 | ||||| ||||| ||| Sbjct 8627 TCCAAAAGGAATCCACT 8611 >seq8389 Length=52536 Score = 89.7 bits (98), Expect = 7e-13 Identities = 148/214 (69%), Gaps = 0/214 (0%) Strand=Plus/Minus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 |||||||||| |||| || || || || || || ||||| | || || || | Sbjct 37948 TGCAAATATTTGTAAAGACCTTGACTGGCAAGACCATTACACTAGAGGTTGAGAGCTCTG 37889 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 |||| ||| | |||||||| ||| || || || ||||| ||||| || ||||| | Sbjct 37888 ATACGATTGATAATGTAAAGGCTAAGATTCAGGACAAGGAAGGAATTCCCCCTGATCAGC 37829 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 | || |||||||||||||| || || | || ||| |||| | | ||||| |||| Sbjct 37828 AGAGGCTCATTTTTGCAGGCAAGCAGCTGGAGGATGGGCGAACCCTTGCTGATTACAATA 37769 Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACG 146245 | || || ||||| || |||| | || ||||| Sbjct 37768 TTCAGAAGGAATCCACCCTCCACCTTGTCTTACG 37735 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 685402518939400