Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Picea_20abies_20[ConGenIE_20PRJEB1822-1.0_202015-05-12] 10,253,695 sequences; 12,301,475,675 total letters Query= NC_023557.1 Length=271084 Score E Sequences producing significant alignments: (Bits) Value seq6721204 163 4e-35 seq6710082 91.5 2e-13 >seq6721204 Length=265 Score = 163 bits (180), Expect = 4e-35 Identities = 205/273 (75%), Gaps = 15/273 (5%) Strand=Plus/Plus Query 72036 CGATGCTGAGATGGCGGAAATCGTTAAAGAGTGTGAAGCAGAAACA-TACGCACTCTTTA 72094 |||| |||||||||||||||| | |||||||| |||||| | || | || ||| Sbjct 1 CGATCCTGAGATGGCGGAAATTGCCGAAGAGTGT-AAGCAGGAGTGCTATGACCTGTTTG 59 Query 72095 AGGACGCTGCAGAGCAGGAGAAAGACTGGGCGAACTATCTATTCCAGGACGGGTCGATGA 72154 | || || | |||||||||||||||||| | ||||| |||| ||||| ||||||| Sbjct 60 TTCAGGCAGCTCAACAGGAGAAAGACTGGGCGGATTATCTGTTCCGCGACGGTTCGATGA 119 Query 72155 TCGGTCTGAACAAAGAGATCGTGTGCCAGTACATCGAATACATCACCAACATCCGTATTC 72214 | |||||||| ||||| || | ||||||||| | |||||||||||||| |||||||| | Sbjct 120 TTGGTCTGAATAAAGACATTCTCTGCCAGTACGTTGAATACATCACCAATATCCGTATGC 179 Query 72215 GCGCCATCGGTTACGATGACATCTACGCCGGTGTCAAA---GCT--AACCCAATCCCATG 72269 || |||||| || |||| ||| || || | ||| ||||| ||||| || Sbjct 180 AGGCAGTCGGTT----TG-GATCT--GCC-GTTCCAGACGCGCTCCAACCCGATCCCGTG 231 Query 72270 GATCAACTCCTGGTTGGTTTCTGACAACGTGCA 72302 ||||||| | ||| |||| ||||| |||||||| Sbjct 232 GATCAACACTTGGCTGGTGTCTGATAACGTGCA 264 >seq6710082 Length=265 Score = 91.5 bits (100), Expect = 2e-13 Identities = 64/73 (88%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 165194 TCTATAGTTCAGTCGGTAGAACAGCGGACTGTTAATCCGTAGGTCGCTGGTTCGAATCCA 165253 ||| |||||||||||||||||| |||||||||||||||||| ||| ||||||||| |||| Sbjct 102 TCTGTAGTTCAGTCGGTAGAACGGCGGACTGTTAATCCGTATGTCACTGGTTCGAGTCCA 161 Query 165254 GCTAGACCAGCCA 165266 | ||| ||||| Sbjct 162 GTCAGAGGAGCCA 174 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 756172699696800