Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Picea_20abies_20[ConGenIE_20PRJEB1822-1.0_202015-05-12] 10,253,695 sequences; 12,301,475,675 total letters Query= NC_023689.1 Length=76260 Score E Sequences producing significant alignments: (Bits) Value seq2171 313 1e-80 >seq2171 Length=73796 Score = 313 bits (346), Expect = 1e-80 Identities = 582/850 (68%), Gaps = 21/850 (2%) Strand=Plus/Plus Query 66172 GACGTCATTCCCACCGGCTCTATCGCCCTGGACGGCGCTCTGGGCATCGGGGGGTACCCG 66231 || |||||||| | ||||| | | ||||| ||| || ||| |||| || ||| Sbjct 10848 GAGGTCATTCCGTCGGGCTCGCTTGGGCTGGATATCGCGCTCGGCGTCGGCGGTCTGCCG 10907 Query 66232 AGGGGCCGGGTGGTGGAAATCTACGGCCCAGAATCTTCAGGGAAGTCAACTCTGTGTCTC 66291 | ||| |||||||| || |||||||| || ||||| || || ||| | || || || Sbjct 10908 AAGGGACGGGTGGTCGAGATCTACGGGCCGGAATCCTCCGGCAAGACCACGCTCGCGCTG 10967 Query 66292 CACGCGGTGGCCAATGCGCAGAAGGCCGGTGGCAACGCCGCCTACATCGACGCTGAGCAC 66351 || |||||||| | || |||||| || |||| | ||||| |||||||| || ||| Sbjct 10968 CATACGGTGGCCGAAGCCCAGAAGAAAGGCGGCATCTGCGCCTTTATCGACGCCGAACAC 11027 Query 66352 TCCCTGGACCCTGAGTACGCCAAGGCGCTCGGTGTGGACCTCGACAACCTCGTGGTGGTT 66411 | || || || | || ||| |||||| || | |||| | || || | Sbjct 11028 GCGCTCGATCCGGTCTATGCCCGCAAGCTCGGCGTCAATGTCGATGAACTTCTGATTTCG 11087 Query 66412 CAGCCGGACACTGGCGAGCAGGCCCTGGAGATCGTTGACCTCCTCGTCAAGTCTGGCGAG 66471 ||||| ||| ||||||||||| ||||| |||| ||| || || || |||| | Sbjct 11088 CAGCCCGACCACGGCGAGCAGGCGCTGGAAATCGCCGACACGCTGGTGCGCTCGGGCGCG 11147 Query 66472 CTGTCCATCGTCG--TCGTTGACTCTGTGGCGGCCCTGGTGCCGCGCGCCGAGCTCGAAG 66529 ||| || | |||| ||||| |||||||| ||||||||||||||||| ||||| | Sbjct 11148 --GTCGATGTGCTGATCGTGGACTCGGTGGCGGCGCTGGTGCCGCGCGCCGAACTCGAGG 11205 Query 66530 GCGACATCGGGGACAGTCACGTCGGCCTGCACGCGCGCCTCATGTCGCAGGCCATGCGCA 66589 | || || || ||| | || |||| ||||| || ||| ||||| |||||| Sbjct 11206 GTGAGATGGGCGACGCGCTGCCGGGATTGCAGGCGCGACTGATGAGCCAGGCGCTGCGCA 11265 Query 66590 AGCTCACCGGCACCATCTCCAGCACCAACACGCTGACGCTCTGGGTCAACCAGTTGCGCG 66649 |||| |||| | | ||| || || | || || | ||| |||||||| | ||| Sbjct 11266 AGCTGACCGCCTCGATCAACAAGTCCCATACCATGGTGATCTTCATCAACCAGATCCGCA 11325 Query 66650 AGAAGATCGGCAACGTGGGCTACGGCCCGAACGAGACCACCACGGGCGGCAAGGCTTTGA 66709 ||||||||| ||| |||||| || || |||||||| |||||||| || ||| Sbjct 11326 TGAAGATCGGT---GTGATGTACGGCTCGCCGGAAACCACCACCGGCGGCAATGCGCTGA 11382 Query 66710 GGTTCTACGCCTCAGTCCGCATGGATGTCCGTCGCATCGCCACCGA-GAAGGAAGGCGAT 66768 |||||||||||| || ||| | ||| |||| ||||||| | | || ||||| |||| Sbjct 11383 AGTTCTACGCCTCGGTGCGCCTCGATATCCGCCGCATCGGC-CAGATCAAGGAGCGCGAC 11441 Query 66769 GAGGCTGTCGGCAACCGCACCCGGGTGAAGGTCGTCAAGAACAAGCTGGCCCCGCCGCAC 66828 || | ||||||||| |||||||| ||||| || |||||||||||||| |||||| | Sbjct 11442 GAAGTCGTCGGCAACTCGACCCGGGTCAAGGTGGTGAAGAACAAGCTGGCGCCGCCGTTC 11501 Query 66829 CGCAACGCCGAGTTCTCCGTCGTGTACGGGGAGGGCATCTCGCGTGAGGTCGAACTCCTC 66888 | | ||| ||| | || ||||||| |||||| ||||| || |||| ||||| Sbjct 11502 AAGCAGGTCGAATTCGACATCATGTACGGCGAGGGCGTCTCGAAGATGGGCGAAATCCTC 11561 Query 66889 GACCTGGCCGTGTCGCAGGGCCTGGTGAAGAAGTCGGGCGCCTGGTTCAAGTACGGGGAC 66948 ||||| | ||| | ||| | || ||||||| || ||||||||| |||| | Sbjct 11562 GACCTCGGCGTCAAGGCCGGCATCGTCGAGAAGTCCGGTGCCTGGTTCTCCTACGATAGC 11621 Query 66949 AAGAACGTCGCTCAGGGC------AAGCCCAAGGCCGTCCAGTGGCTCAAGGCCAACCCG 67002 || | ||| |||||| || ||||||| || |||||||| ||||| Sbjct 11622 CAGCGCCTCGGGCAGGGCCGCGAGAATTCCAAGGC------GTTCCTCAAGGCGAACCCC 11675 Query 67003 GACATCACCG 67012 || || |||| Sbjct 11676 GAGATTACCG 11685 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 213426871422795