Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Picea_20abies_20[ConGenIE_20PRJEB1822-1.0_202015-05-12] 10,253,695 sequences; 12,301,475,675 total letters Query= NC_024447.1 Length=282356 Score E Sequences producing significant alignments: (Bits) Value seq544196 86.0 1e-11 >seq544196 Length=3977 Score = 86.0 bits (94), Expect = 1e-11 Identities = 103/139 (74%), Gaps = 11/139 (8%) Strand=Plus/Plus Query 81644 AGAGTAAATTCCTTCTGTATATTATAATCAGATAGAGTTC--------TACAGT--CTT- 81692 || ||| |||||||||| ||||||||||| | ||| |||| | |||| ||| Sbjct 1169 AGGGTAGATTCCTTCTGAATATTATAATCGGCTAGGGTTCGGCCATCCTCCAGTTGCTTG 1228 Query 81693 CTAACAAAGATTAGTCTTTGTTGACCTGGAAGTATTTCTTCCTTATCTTGAATCTTTGCT 81752 | ||||| || || || |||||| | ||| | || ||||||| ||||||||||| || Sbjct 1229 CCCACAAAAATGAGCCTCTGTTGATCAGGAGGAATACCTTCCTTGTCTTGAATCTTAGCC 1288 Query 81753 TTTATATTTTCAATCGTAT 81771 || | ||| |||||||||| Sbjct 1289 TTGACATTATCAATCGTAT 1307 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 787619913695200