Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Picea_20abies_20[ConGenIE_20PRJEB1822-1.0_202015-05-12] 10,253,695 sequences; 12,301,475,675 total letters Query= NC_025430.1 Length=42351 Score E Sequences producing significant alignments: (Bits) Value seq5899 86.0 1e-12 >seq5899 Length=58143 Score = 86.0 bits (94), Expect = 1e-12 Identities = 147/210 (70%), Gaps = 5/210 (2%) Strand=Plus/Minus Query 233 ACGATTTCAGTTGTGTAGCGATCAACGCCAGCCTGGTCCTGCCACTTGCGCGTTTGCAGC 292 |||| ||| || | |||||||| ||| ||| ||||||||| ||||| || || ||| Sbjct 28758 ACGACTTCGGTCGAATAGCGATCCTTGCCGTCCTTGTCCTGCCATTTGCGAGTCTGGAGC 28699 Query 293 GCGCCTTCAATGAACACCTTGCTGCCTTTGCGCAGGTACTGGCTGGCGATTTCTGCCAG- 351 ||| || ||| | |||||| ||| || ||| ||||| ||| || | ||| | Sbjct 28698 TGGCCCTCGATGTAAACCTTGGAGCCCTTCTTCAGATACTGCTCGGCAATCT-TGCAAAG 28640 Query 352 --CTTTCC-GAAGATGACCACGCGGTGCCATTCCGTTTTTTCTTTCTTCTCCCCTGTCTG 408 ||| | |||||| || || || ||||||||||| ||||||||| ||| || | | Sbjct 28639 ACCTTCGCTGAAGATCACGACACGATGCCATTCCGTCTTTTCTTTCCGCTCGCCGGAATT 28580 Query 409 CTTATCCTTCCAGGTTTCAGACGTGGCAAT 438 ||| || |||||| || || || || || Sbjct 28579 CTTGTCGCGCCAGGTATCCGAGGTCGCGAT 28550 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 118914745331670