Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Picea_20abies_20[ConGenIE_20PRJEB1822-1.0_202015-05-12] 10,253,695 sequences; 12,301,475,675 total letters Query= NC_025678.1 Length=32661 Score E Sequences producing significant alignments: (Bits) Value seq416950 475 6e-130 seq1393656 145 1e-30 >seq416950 Length=5269 Score = 475 bits (526), Expect = 6e-130 Identities = 1494/2283 (65%), Gaps = 71/2283 (3%) Strand=Plus/Plus Query 5120 AGAGTCATGTCTTTCCAAGGGCGCAGCGTTCGAGTTAAGGTTGTTTCCGTAACGGTGAAA 5179 || ||| ||||||||||||| | || || || ||||| |||||||| || || ||||| Sbjct 452 AGGGTCTTGTCTTTCCAAGGCCTCACTGTGCGCGTTAAAGTTGTTTCGGTGACTGTGAAC 511 Query 5180 GGATGGGC-TCCCGGTTGAGCGCTTGCTAGGGTGCGTTTGAAACTCAGGCGACTGGTGGA 5238 || || | | | | || | || ||||| ||||| ||||||||||| |||||| Sbjct 512 GGGGCCGCGTTGCTTTGGTTCG-TAGCGAGGGTCCGTTTTAAACTCAGGCGGCTGGTGTG 570 Query 5239 GAAGCGTTCGTTTCCTCCCTGGTAGTCGGTAAGATAGCATTGTACCATGAGT-TCGTAAT 5297 ||||| | | | || ||| ||| | | ||||||| ||| ||| || ||| Sbjct 571 AAAGCGCTGGCTCCCCTGCTGCGCGTCAGACAAGTAGCATTTAGCCAA-AGTGTCATAAC 629 Query 5298 GGAGAGATTCGGCCG---CGTGGCCTTTGGCTCTCAGTTTACCCTTAGAGAAGTGGTTGC 5354 | |||| | | | || || || || | ||||||||| ||| | || | Sbjct 630 ATA---ATTCAGTAGTTGCATGACCCTTCGCCCGCAGTTTACCTTTACCCACATGCCCAC 686 Query 5355 AAGAAGGGCAGTATAAGCATTTCAAAGCGTAGAGTTTAGGAGCCAAAAACACAGATTCTG 5414 | ||| || | ||| ||||| || ||||||||||| | ||| |||||||| | Sbjct 687 AGCAAGTACAAACAGTGTTTTTTAAAGCATACAGTTTAGGAGCGAGAAAGACAGATTCAG 746 Query 5415 GGGCATAAGCATCTCCCCCGCATTTTTCACACACTGTTTCGCATTCAACAAGCCAGGT-- 5472 | ||||||| | |||||||||||| || || |||||||| | ||| || Sbjct 747 AACTAAAAGCATCAGACTTACATTTTTCACACTGAGTCTCACATTCAACCAACCATGTAA 806 Query 5473 TAGTTCCGGTTCGGAGGGGTCAAAAACTAATTTGCCTCCGttttttttGATTC----TTT 5528 ||| | | || || |||||||||| || ||||| ||||| || || | ||| Sbjct 807 TAGATGGGTTTTTT--GGATCAAAAACTAGCTTCCCTCCATTTTTCTTAATGCGGTGTTT 864 Query 5529 TCCTACCTTTGGTTTCCATGAGTCGATGTCCCAAATTTGTCACGAATAAGCTGTCGGTGT 5588 ||| ||||| | ||||||| || || ||| | ||||| || |||||||| |||| Sbjct 865 ACCT--CTTTGCT--CCATGAGCCGGTGCCCCTCTTCGGTCACAAACAAGCTGTCAGTGT 920 Query 5589 CGCCGTATACGGATTTAAGAGGGCGTTGACAGAGTGGGGTTCCGCGATCCTCTTCGTAAA 5648 | ||||| || ||||| | || |||| ||||| |||| | || || |||| | Sbjct 921 CCCCGTAGACAGATTTTATAGTTTTTTGATGTAGTGGCTTTCCTCTGTCTTCGGCGTATA 980 Query 5649 GAAACTCTGACCATTCTGAAACGAAAGCTCGGGTCCAGGCTAACACAAAGGAAGCTATTT 5708 ||| |||| ||| || || || || ||| |||||||| || ||||| ||||| || | Sbjct 981 AAAATTCTGCCCACTCAGACACAAATACTCTAGTCCAGGCCAAAACAAACGAAGCAATGT 1040 Query 5709 GGGAGGGGTACCGATCATTGTCAATGAGGGGGTCTGTGTTTTGAAGGGTGTGCAAACAGA 5768 |||| | ||||| | || || || | || |||||| | ||||| || || | Sbjct 1041 GGGAAGCGTACCTGTTGTTTTCTATTAAAGGAGAGTTGTTTTCTAAAGTGTGTAAGCATA 1100 Query 5769 GGTCCGTTTCTTCAGCGTCCAGGAAAATGATTGGCTTGTAAGTGTAAGTCACGTGATCAT 5828 ||| ||||||| || | || |||||||||| || | || ||||||||| || Sbjct 1101 TGTCATCATCTTCAGTTTCTAAAAACGTGATTGGCTTATACTTATATGTCACGTGACTAT 1160 Query 5829 GGGGGTCTTTTGGGGGGTTATAAAAGGGGGCGTTGTATTTTTCGT---CGTCACTTTCTT 5885 |||||| ||||||| ||| ||| | ||||| | |||||||| | Sbjct 1161 C-------TTTGGG----TATAAAAAGGG----TGTGCTCTTCGTTTTCATCACTTTCAT 1205 Query 5886 CCGGTTCGCTGTCCACGAGCGCCAAATCTTTGGGTGAGTAAAGCCGTTGAAAGGATGGTA 5945 | ||| || || || | |||| || | | | ||| ||| | Sbjct 1206 CTAACTCGG----CAGAAGGTGCAGGT----GGGTAAGCTACGAC----AAATTCTGGCA 1253 Query 5946 GGACTTCCGCACTGAGATTGTCAGTTTCTATAAATGAGGAGGATTTGATATTAATTTGCC 6005 | ||| ||||| | |||||||||||||| ||||| || |||||||| || | | Sbjct 1254 TAATTTCAGCACTAAAGTTGTCAGTTTCTATGAATGATGAAGATTTGATGGAAAAGTTAC 1313 Query 6006 CGTTAGCTATTCCTCTAAGGGTTTTGTCGTCCAATTGGTCAGAAAATACAACTTTTTTAG 6065 | | || || | | | || | || | |||||| ||||| |||| |||||| Sbjct 1314 CTCTGGCGATGGTTTTTGACGCGCTGGCTTCTAGTTGGTCTGAAAACACAATTTTTTTGT 1373 Query 6066 TGTCAAGTTTCGTGGCGAAAGACCCGTATAAAGCGTTCGACAGCAGTTTTGCAATAGACC 6125 |||| | ||| ||||| || || ||||| ||||| || || || || || || | Sbjct 1374 TGTCCAATTTAGTGGCAAAGCTGCCATATAAGGCGTTGGAAAGTAGCTTAGCTATGCTTC 1433 Query 6126 TCAAAGTTTGGtttttttCCTTGTCTGCCTTTTCCTTGGCGGCTATGTTGAGCTGTACGT 6185 || |||||||| ||||| |||||||| ||||| ||||| | ||||| ||||| |||| Sbjct 1434 GCATGGTTTGGTTCTTTTCTTTGTCTGCTTTTTCTTTGGCTCCGATGTTTAGCTGCACGT 1493 Query 6186 AATCCCTCGCCACGCATTTCCACTCCGGAAAAACGGTAGTGCGTTCGTCGGGAATGAGAC 6245 | || | |||||||| |||||||| || || | ||| || | |||||| |||| | | Sbjct 1494 ATTCTTTGGCCACGCACTTCCACTCTGGGAAGATGGTTGTTCTTTCGTCTGGAAGAATGC 1553 Query 6246 GCACCTTCCATCCTCTGTTGTGTAAGGTGACTATATCAATGCTGGTGGCTACCTCTCCTC 6305 |||| ||||||||||||||| || || | | || || || ||||| ||||||| Sbjct 1554 GCACTGCCCATCCTCTGTTGTGCAAAGTAATCAAGTCTATAGAAGTAGCTACTTCTCCTC 1613 Query 6306 TTAGGCGTTCGTTGGTCCAACACAGTCTTCCACCTTTTTTGGAGCAAAATGGGGGAAGCA 6365 | | ||||| ||||| ||||| ||||| |||||| |||||||||| || || || Sbjct 1614 GCAAAGGCTCGTTAGTCCAGCACAGCCTTCCGCCTTTTCTGGAGCAAAACGGAGGCAGTT 1673 Query 6366 CGTCTAGGAGTGTTTCATCTGGGGGATCGGCATCAATTGTAAAGATCCCCGGTAAAAGTG 6425 | || || | || ||||| ||||| || || || || || || || || | ||| Sbjct 1674 CATCAAGAAACAACTCGTCTGGAGGATCCGCGTCGATGGTGAAAATGCCTGGAAGAAGAC 1733 Query 6426 AGGAGTCGAAATATGATATCTTTTG--AAAATTATTTAAAGTTTGTTG--CCACT-TGTG 6480 | ||| ||||| || ||||| || | ||| ||| || || ||| | ||| Sbjct 1734 ACTCGTCAAAATAGTCAATTTTTTGCTCTAAGT-TTTCAAGCTTTCTGATCCATTCTGT- 1791 Query 6481 GGCCGCCAGCGCTCTTTCAAACGGATTAAgggggggTCCCCAAGGCATGGGGTGGGTAAG 6540 || || | ||||||||| ||||||| | || | || | || | || || || || Sbjct 1792 CGCAGCTAAGGCTCTTTCATACGGATTTAAAGGCTGCCCGCTGGGAAAAGGATGCGTTAG 1851 Query 6541 TGCAGAAGCGTACATTCCGCAAATGTCATACACGTAGAGAGGTTCGTTGAGGATGCCAAT 6600 ||| || ||||| ||||| ||||||||||| || | || | | | ||||||||| Sbjct 1852 AGCACTGGCATACATGCCGCAGATGTCATACACATAAATTGGCTGTTCCATGATGCCAAT 1911 Query 6601 ATAGGTGGGATAGCATCTTCCTCCGCGGATGCTGTTTCTTACATAGTCATAAAGTTCATG 6660 ||| ||||||||||| | || || |||||||| | | || |||||||| | |||||| Sbjct 1912 ATAAGTGGGATAGCAGCGACCACCACGGATGCTCTGGCGGACGTAGTCATACATTTCATG 1971 Query 6661 GGAGGGGGC-CAGAAAATTGGGACCAAGATGTGCTTT-TTTGGGTTCGTTTGCCGTGTAC 6718 || || || | |||| | | ||| | |||||| ||||| | || | |||| Sbjct 1972 AGATGGTGCTAATAAAACGTTGTCTAAG-TTTGCTTTATTTGGCCTAACTT-CTCTGTAT 2029 Query 6719 AATATTTGACGAAAAATGGCGTGAGAATTGGAAGAAATAGTAGGCCTTTGAAAAACATTA 6778 |||||||| |||||| || ||||| || || |||||| || |||||||||| ||| Sbjct 2030 AATATTTGCTTAAAAATTGCATGAGAGTTAGAGCTAATAGTGGGTCTTTGAAAAATGTTA 2089 Query 6779 AAAGAGCTTTCTGCATATCCCACGGTTTCACGAATAAACTGCGAATAGGAAAGAAAAAGT 6838 || || || | | ||| | |||||| | || || ||| Sbjct 2090 AATGAAGCATCAGGTAAGTTCACTTGAGAAGCAATAAAGTTTTTGTAAGATTCTTGGAGT 2149 Query 6839 TTTTCCACCAATGCAGCGGTGACCAGAACGTCCAGGGCGCAGTATTCGAGGGTTTCATGA 6898 || | || | || | || || | ||||| | | || || | || |||| || Sbjct 2150 TTGTTTACTAGGGCCGATGTCACTAACACGTCTTGCACACAATAGTGCAGCGTTTGCTGG 2209 Query 6899 ATAAGGTTGTAAGAGGATAGtttttttGATTTCCAGAGTTCGAGGTTGAGGAGGTACTC- 6957 || | || ||||| | |||||| | |||| || | |||||| | ||||| Sbjct 2210 ATTATGTCGTAAGCCCCCACGTTTTTTTCTCTCCACAGAGCCTTGTTGAGTTGATACTCT 2269 Query 6958 -GGATTCATCCTTCCAATACTCTT-GAAGAGGAAAACCATCAGCGGTAGCCCGGTAAGAA 7015 | | || ||||| || |||| | ||||| ||||| | ||||||| Sbjct 2270 TCGCTGGAT--TTCCAGTA-TCTTAGGCTTGGAAAGCCATCCTCATCTTGTTGGTAAGAC 2326 Query 7016 CCCAACATATAAAACTCGTTTACTGCTTTATATGGACAACAACCTTTTTCCACTGGTAAA 7075 || | |||| || || |||||||||| || ||||| | |||||||| || || | Sbjct 2327 CCTATTCTATAGAATTCATTTACTGCTTCGTACGGACAGCTTCCTTTTTCTACAGGCAGC 2386 Query 7076 GAGTAGGCTTCAGCCGCTTTTCTGAGAGAGGTGTGAGTTAGTTGAAAAGTGTCTCTGACC 7135 ||| || |||| || ||||| | ||||| || || |||||||||||| ||| Sbjct 2387 TCGTAAGCCCCAGCAGCATTTCTTAAGCTAGTGTGGGTCAGCGCAAAAGTGTCTCTTACC 2446 Query 7136 ATAACTTTCAAAAATTGGTTTTTAAAGTCCGTTTCATCGCACGTTCCCCGTTGCCAGAGG 7195 |||| ||| | ||| |||| || ||||| | | | |||| | | ||| | Sbjct 2447 ATAAATTTAACAAACTGGTACTTGTGGTCCGCGGCTGTGAGCTTTCCACACTCCCAATCG 2506 Query 7196 GTGAAGTCCTTGCGTTGACGATACTTGGGGTTTGGTAGAGAAAGAGTAACGTCATTAAAC 7255 | ||| || || |||| ||||| || || |||| ||| || || |||||| ||| Sbjct 2507 GCGAAATCTTTTCGTTTTTCGTACTTTGGATTAGGTAAGCAAAAAGAAATGTCATTGAAC 2566 Query 7256 AAGATTTTACCGGCTCTGGGGATGAAGTTGC-GTGAAATGCGAAACGGGGCAGGTACCGC 7314 | ||||||||| ||| || || || || | | | | |||| |||| | || | Sbjct 2567 AGTATTTTACCGTTTCTTGGCATAAAATTTCTATTTATTTTGAAAGCAGGCA-GAACATC 2625 Query 7315 AGTGCGATTGTTAATTACTTGGGCGGCCAGAACAATTTCGTCAAATCCGTTAATGTTGTG 7374 || | |||| || ||||| ||||||| || || || ||||| ||| |||||||| Sbjct 2626 CGTTCTGTTGTGTATGACTTGCGCGGCCAACACGATCTCATCAAAACCGCAGATGTTGTG 2685 Query 7375 TCC 7377 || Sbjct 2686 GCC 2688 Score = 145 bits (160), Expect = 1e-30 Identities = 356/537 (66%), Gaps = 2/537 (0%) Strand=Plus/Plus Query 8551 AAGACTACCGGGCCCGTCACCTTGAACCTGAAAGAAAGTTCAACAGAATCAATGTCTGCG 8610 || || || ||||| ||||| ||||||||||||| | ||| | ||| |||||||||||| Sbjct 3724 AATACCACTGGGCCGGTCACTCTGAACCTGAAAGATATTTCCATAGAGTCAATGTCTGCG 3783 Query 8611 TCATTGACGGCGGCCTGGCGAAGAATTTCTTGAACGTCTCCGGAATTATCCTGAAAGGCA 8670 ||||| || || | || | ||| || ||||||||| ||||| ||| | || Sbjct 3784 TCATTAACTGCCACTTGCTTTAAAATCTCACTCACGTCTCCGCTGTTATCGTGATAAGCT 3843 Query 8671 ATTTCGGTCATGAGTTGATCAATTTCTTCTTCCTGGAGTTCTCCTCGGCCGGCCCGTTCC 8730 ||||| | ||| | || ||||| ||||| | || | ||||||| || || | || Sbjct 3844 ATTTCTGCCATAAACTGCTCAATCTCTTCCTGCTCTAACTCTCCTCTCCCTGCTCTCTCA 3903 Query 8731 ACCGTGGCTGAGAGATCGTTAGAGATGCGACCTATGAGTTGAGAGAAAGCTCCCTGACCG 8790 || ||||| | | || | |||||| |||| | | ||||| | || Sbjct 3904 ACTGTGGCAGCCAAGTCAATGCTAATGCGAGACATGATGTTACTAAAAGCCTGTTCCCCA 3963 Query 8791 TTTTCGTTCCACACGCGACTATACACGACCGCTCCCTGGTCGTCTCGCGCGCGCATGACC 8850 ||||| |||||||| | || ||||| | ||| | |||| || || | ||| || Sbjct 3964 TTTTCATTCCACACTCTGCTGTACACAATTTGTCCATCTTCGTTTCTGGCTCTCATTACT 4023 Query 8851 ACTTGAGCGAGATTGAGTTCTACGTGACGAGAGAAAACTGGATAATTTCTTAA-GCGCTG 8909 || || || ||||| || || | | |||| ||| || | ||| | || Sbjct 4024 ACCTGCGCCAGATTAAGCATCACAT-ATCTCCCAAAAGGGGAAGATACCCTAATTTGGTG 4082 Query 8910 AAATAAGTAATTCAAAGTGGTGGCAATGTGTTCCGTAACGAAAAAATACATGATCCATCT 8969 | |||||| || | ||||| ||||||||||| | || ||||| |||| | ||| | Sbjct 4083 ATTTAAGTAGTTTAGTGTGGTAGCAATGTGTTCTGCCACAAAAAAGAACATCACCCAGCG 4142 Query 8970 CCGTAGCGTAGATTCATTAATGTCCCCCAAAGCTTCCAACCGTTCCATGGTTTCGTAAAA 9029 | || || | |||||||||||| || | || ||||| || | || || ||||| Sbjct 4143 TTGGAGAGTTGTTTCATTAATGTCACCTAGCGCCTCCAAACGCTGAATAACCTCATAAAA 4202 Query 9030 ATCAATTGCAAAGTTAAAAAACTGAGAGTTTCGCGCGGCAACTGTAAGTTCCTCTTC 9086 || | ||||||||||||||||| ||||| || | || || || || ||||| Sbjct 4203 ATTTACAGCAAAGTTAAAAAACTGCTGGTTTCTAGCAGACACAGTGAGCTCTTCTTC 4259 >seq1393656 Length=1543 Score = 145 bits (160), Expect = 1e-30 Identities = 356/537 (66%), Gaps = 2/537 (0%) Strand=Plus/Plus Query 8551 AAGACTACCGGGCCCGTCACCTTGAACCTGAAAGAAAGTTCAACAGAATCAATGTCTGCG 8610 || || || ||||| ||||| ||||||||||||| | ||| | ||| |||||||||||| Sbjct 32 AATACCACTGGGCCGGTCACTCTGAACCTGAAAGATATTTCCATAGAGTCAATGTCTGCG 91 Query 8611 TCATTGACGGCGGCCTGGCGAAGAATTTCTTGAACGTCTCCGGAATTATCCTGAAAGGCA 8670 ||||| || || | || | ||| || ||||||||| ||||| ||| | || Sbjct 92 TCATTAACTGCCACTTGCTTTAAAATCTCACTCACGTCTCCGCTGTTATCGTGATAAGCT 151 Query 8671 ATTTCGGTCATGAGTTGATCAATTTCTTCTTCCTGGAGTTCTCCTCGGCCGGCCCGTTCC 8730 ||||| | ||| | || ||||| ||||| | || | ||||||| || || | || Sbjct 152 ATTTCTGCCATAAACTGCTCAATCTCTTCCTGCTCTAACTCTCCTCTCCCTGCTCTCTCA 211 Query 8731 ACCGTGGCTGAGAGATCGTTAGAGATGCGACCTATGAGTTGAGAGAAAGCTCCCTGACCG 8790 || ||||| | | || | |||||| |||| | | ||||| | || Sbjct 212 ACTGTGGCAGCCAAGTCAATGCTAATGCGAGACATGATGTTACTAAAAGCCTGTTCCCCA 271 Query 8791 TTTTCGTTCCACACGCGACTATACACGACCGCTCCCTGGTCGTCTCGCGCGCGCATGACC 8850 ||||| |||||||| | || ||||| | ||| | |||| || || | ||| || Sbjct 272 TTTTCATTCCACACTCTGCTGTACACAATTTGTCCATCTTCGTTTCTGGCTCTCATTACT 331 Query 8851 ACTTGAGCGAGATTGAGTTCTACGTGACGAGAGAAAACTGGATAATTTCTTAA-GCGCTG 8909 || || || ||||| || || | | |||| ||| || | ||| | || Sbjct 332 ACCTGCGCCAGATTAAGCATCACAT-ATCTCCCAAAAGGGGAAGATACCCTAATTTGGTG 390 Query 8910 AAATAAGTAATTCAAAGTGGTGGCAATGTGTTCCGTAACGAAAAAATACATGATCCATCT 8969 | |||||| || | ||||| ||||||||||| | || ||||| |||| | ||| | Sbjct 391 ATTTAAGTAGTTTAGTGTGGTAGCAATGTGTTCTGCCACAAAAAAGAACATCACCCAGCG 450 Query 8970 CCGTAGCGTAGATTCATTAATGTCCCCCAAAGCTTCCAACCGTTCCATGGTTTCGTAAAA 9029 | || || | |||||||||||| || | || ||||| || | || || ||||| Sbjct 451 TTGGAGAGTTGTTTCATTAATGTCACCTAGCGCCTCCAAACGCTGAATAACCTCATAAAA 510 Query 9030 ATCAATTGCAAAGTTAAAAAACTGAGAGTTTCGCGCGGCAACTGTAAGTTCCTCTTC 9086 || | ||||||||||||||||| ||||| || | || || || || ||||| Sbjct 511 ATTTACAGCAAAGTTAAAAAACTGCTGGTTTCTAGCAGACACAGTGAGCTCTTCTTC 567 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 91682360904570