Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Picea_20abies_20[ConGenIE_20PRJEB1822-1.0_202015-05-12] 10,253,695 sequences; 12,301,475,675 total letters Query= NC_025960.1 Length=148981 Score E Sequences producing significant alignments: (Bits) Value seq360634 91.5 1e-13 seq62192 86.0 5e-12 seq67916 84.2 2e-11 seq20028 84.2 2e-11 seq463317 82.4 6e-11 >seq360634 Length=6173 Score = 91.5 bits (100), Expect = 1e-13 Identities = 137/195 (70%), Gaps = 0/195 (0%) Strand=Plus/Minus Query 131930 GACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAA 131989 || || || ||||| |||||||| | ||| || |||||||||||| || || | | Sbjct 5792 GATTCCTTCTGAATATTGTAGTCAGCAAGGGTTCGGCCATCTTCGAGCTGCTTTCCCGCA 5733 Query 131990 TAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAAC 132049 |||| ||||| || ||||| || |||||||||||||| || || || |||| Sbjct 5732 AAGATCAGACGTTGCTGATCAGGGGGTATGCCTTCTTTGTCTTGGATCTTGGCCTTCACG 5673 Query 132050 TGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 132109 | || | || || | ||| ||||| | || | ||| |||||||| || ||||| Sbjct 5672 TTGTCGATGGTGTCCGAGCTCTCAACTTCCAAAGTAATCGTCTTACCAGTGAGGGTTTTA 5613 Query 132110 ATGAAAATCTGCATG 132124 | ||| ||||||||| Sbjct 5612 ACGAAGATCTGCATG 5598 >seq62192 Length=24286 Score = 86.0 bits (94), Expect = 5e-12 Identities = 145/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 131914 AACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTC 131973 ||| | ||| | | | ||||| || |||||||| ||||| || || | | |||||| Sbjct 19665 AACAAGATGCAGGGTAGACTCCTTCTGAATGTTATAGTCCGCCAAAGTCCTCCCATCTTC 19724 Query 131974 GAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGT 132033 || || || || | | |||||| | ||| ||||| ||||| || || || ||||| Sbjct 19725 AAGTTGCTTCCCTGCAAAGATTAATCTCTGCTGATCCGGAGGAATCCCCTCCTTATCCTG 19784 Query 132034 AATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTT 132093 ||| || |||| | || | |||||||| || ||||||| ||| | || || Sbjct 19785 AATCTTCGCCTTCACATTATCAATAGTATCGGAGTTTTCAACTTCGAGCGTGATGGTCTT 19844 Query 132094 ACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 |||||||||||||| | || || ||||| Sbjct 19845 GCCAGTCAGAGTTTTCACAAAGATTTGCAT 19874 >seq67916 Length=22924 Score = 84.2 bits (92), Expect = 2e-11 Identities = 137/195 (70%), Gaps = 2/195 (1%) Strand=Plus/Plus Query 131930 GACTCTTTTTGAATGTTGTAGTC-GCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGA 131988 || || || ||||| |||||||| ||| | ||| || |||||||||||| || || | Sbjct 19877 GATTCCTTCTGAATATTGTAGTCAGCT-AGGGTTCGGCCATCTTCGAGCTGCTTTCCCGC 19935 Query 131989 ATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAA 132048 | |||| ||||| || || || || |||||||| ||||| || || || |||| Sbjct 19936 AAAGATCAGACGTTGCTGGTCAGGGGGTATGCCCTCTTTGTCCTGGATCTTAGCCTTCAC 19995 Query 132049 CTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTT 132108 | || | || || | ||| ||||| | || | ||| |||||||| || ||||| Sbjct 19996 GTTGTCAATGGTGTCCGAGCTCTCAACTTCCAAAGTAATCGTCTTACCAGTGAGGGTTTT 20055 Query 132109 TATGAAAATCTGCAT 132123 | ||| |||||||| Sbjct 20056 AACGAAGATCTGCAT 20070 >seq20028 Length=39891 Score = 84.2 bits (92), Expect = 2e-11 Identities = 150/219 (68%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 131905 CAAGCGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACG 131964 ||| || | ||||| || | | | || || ||||| ||||||||||| || ||| || Sbjct 30734 CAAACGGAGAACCAGGTGGAGGGTAGATTCCTTTTGGATGTTGTAGTCCGCCAGGGTTCG 30793 Query 131965 CGAATCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTC 132024 ||| |||||||| ||||||| | |||| || | ||| || ||||| || || ||||| Sbjct 30794 GCCATCCTCGAGCTGCTTACCGGCAAAGATAAGCCTCTGCTGGTCTGGGGGAATCCCTTC 30853 Query 132025 TTTATCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGT 132084 ||||| ||| || || | | || | || || | ||| ||||||| || Sbjct 30854 CTTATCCTGAATCTTGGCCTTGACATTGTCGATGGTGTCAGAGCTCTCGACTTCGAGAGT 30913 Query 132085 CAGCGTTTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 | || || ||||| || ||||| | || |||||||| Sbjct 30914 GATTGTCTTGCCAGTGAGGGTTTTAACAAAGATCTGCAT 30952 >seq463317 Length=4689 Score = 82.4 bits (90), Expect = 6e-11 Identities = 135/195 (69%), Gaps = 0/195 (0%) Strand=Plus/Minus Query 131930 GACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAA 131989 || || || ||||| |||||||| | || || |||||||||||| || || | | Sbjct 4554 GATTCCTTCTGAATATTGTAGTCAGCAAGAGTTCGGCCATCTTCGAGCTGCTTTCCCGCA 4495 Query 131990 TAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAAC 132049 |||| ||||| || ||||| || ||||||||||| || || || || |||| Sbjct 4494 AAGATCAGACGTTGCTGATCAGGGGGTATGCCTTCCTTGTCTTGGATCTTGGCCTTCACG 4435 Query 132050 TGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 132109 | || | || || | ||| ||||| | || | ||| |||||||| || ||||| Sbjct 4434 TTGTCGATGGTGTCCGAGCTCTCAACTTCTAAAGTAATCGTCTTACCAGTGAGGGTTTTA 4375 Query 132110 ATGAAAATCTGCATG 132124 | ||| ||||||||| Sbjct 4374 ACGAAGATCTGCATG 4360 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 417053372213090