Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Picea_20abies_20[ConGenIE_20PRJEB1822-1.0_202015-05-12] 10,253,695 sequences; 12,301,475,675 total letters Query= NC_026594.1 Length=56537 Score E Sequences producing significant alignments: (Bits) Value seq17409 102 3e-17 >seq17409 Length=41676 Score = 102 bits (112), Expect = 3e-17 Identities = 310/470 (66%), Gaps = 22/470 (5%) Strand=Plus/Plus Query 4517 AAGGCCAAGCTCCTGATCGTG---GACGAGTCGTCCATGGTCGACGAGTCGGTCGGTGAA 4573 ||||||||| ||||||||| ||||| | || |||||||||| | |||| Sbjct 36005 AAGGCCAAG---CTGATCGTGATCGACGAATGCTCGATGGTCGACGCGGAACTCGGCCGC 36061 Query 4574 GACCTCCTGTCGTTCGGTGTGCCAATCCTCGCCCTGGGCGACCCCGCCCAGCTGCCGCCG 4633 ||||| ||||||||| | || | || | |||||||| || || ||| |||||||| Sbjct 36062 GACCTGATGTCGTTCGATTGCCCCTTGCTGGTGCTGGGCGATCCGGCGCAGTTGCCGCCG 36121 Query 4634 GTGGCCGGGGC--TGGATTCTTCACC-AAGCAGAAGGCCGACTTC-CTGCTGACCGACAT 4689 | || |||| || || |||||| | || || |||| | | |||| ||||| | Sbjct 36122 AT--CCAGGGCGGCGGCTTTTTCACCGATGCCGA--GCCGGATGCGATGCTCACCGAAGT 36177 Query 4690 CCACCGCCAGGCCCGCGACAACCCCATCATTGAGATGTCGCGCATCGTCCGCGAGGGTGG 4749 ||||| ||||| | ||| |||||||| | ||||||| || |||||||| | Sbjct 36178 GCACCGTCAGGCGCAGGACGACCCCATCGTGCGGATGTCGATGGCGGTGCGCGAGGGCCG 36237 Query 4750 AACCCTGAACCTGGGCCGCTACGGAGACAGCGAAGTCGTCCGGGGCGCTGACTTCCAGCG 4809 | || | || ||| || ||| || ||||| ||||| || ||| | || | | Sbjct 36238 CAGTCTCGATCTCGGCACCTTCGGCGAAAGCGAGGTCGTGCGCCGCGACGCGCTCGATCC 36297 Query 4810 CGACTGGGTATTCCAGGCTGACCAGATTCTCGTCGGGAAAAACGACACCCGCCGAGCCTA 4869 ||| | || | ||||| ||| |||| ||||| ||| |||| || || || || Sbjct 36298 GGACCGCGTCATGGGCGCTGATCAGGTTCTGGTCGGCCGCAACAACACGCGGCGCGCGTA 36357 Query 4870 CAACGCTCGCATCCGCGAGCTGCGCGGGGCCGACCGAG----CTTACCCTCTCAAGGGCG 4925 |||| ||| | || || || |||| | |||| | | || | | || Sbjct 36358 CAACATGCGCGTTCGGCAG--AAGCAGGGC--ATCGAGGATCCGTTGCCGGTGGCCGACG 36413 Query 4926 ACAAGCTGGTCTGCCTTCGCAACAACCACGACTCGGGCCTGCTGAACGGC 4975 |||||||||||||||| |||||||||| | | || ||| | |||||| Sbjct 36414 ACAAGCTGGTCTGCCTGCGCAACAACCGCAAGAAGGCGCTGTTCAACGGC 36463 Score = 91.5 bits (100), Expect = 5e-14 Identities = 119/165 (72%), Gaps = 0/165 (0%) Strand=Plus/Plus Query 4175 TTCCGCCTGTTCGGGTATGCCGGCACGGGCAAGACCACCCTGGCCCGCCACATCGCTGAG 4234 ||||| |||||||| ||||||||||| ||||||||||||||||| || || || || ||| Sbjct 35777 TTCCGGCTGTTCGGCTATGCCGGCACCGGCAAGACCACCCTGGCGCGGCATATTGCGGAG 35836 Query 4235 AACGTGGACGGGCTTGTGCTGTTCGCCGCCCCGACCGGCAAGGCCGCCTACGTCCTGAAG 4294 ||| |||| ||| | ||| ||| |||||||||||||| || || Sbjct 35837 GGCGTCAACGGCACCGTGAAATACGCGGCCTTCACCGGCAAGGCCGCGCTGGTGATGCGC 35896 Query 4295 ACCAAGGGCTGCCCGAACACCAGCACGATCCACCAGCTGATCTAC 4339 | |||||| ||| ||| || ||| || || |||||||||| Sbjct 35897 AACAAGGGTTGCGACAACGCCTCCACCATTCATTCGCTGATCTAC 35941 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 158782506475410