Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Picea_20abies_20[ConGenIE_20PRJEB1822-1.0_202015-05-12] 10,253,695 sequences; 12,301,475,675 total letters Query= NC_027705.1 Length=33090 Score E Sequences producing significant alignments: (Bits) Value seq416950 419 4e-113 seq1393656 212 1e-50 >seq416950 Length=5269 Score = 419 bits (464), Expect = 4e-113 Identities = 1396/2144 (65%), Gaps = 92/2144 (4%) Strand=Plus/Plus Query 7618 GCGTGACCTTTTGCTCTAAGTTTGCCTTTGCCCACGGTTCCGCAACGCACACAGACAGTG 7677 || ||||| || || | ||||| ||||| ||||| || || | ||| |||||| Sbjct 644 GCATGACCCTTCGCCCGCAGTTTACCTTTACCCACATGCCCACAGCAAGTACAAACAGTG 703 Query 7678 TTCTTTAGCCCATATAGCTTAGGAGCAAGAAAGACGGATTCTCCGCTGTAGGCATCACCC 7737 || |||| |||| || |||||||| |||||||| ||||| || | |||||| | Sbjct 704 TTTTTTAAAGCATACAGTTTAGGAGCGAGAAAGACAGATTCAGAACTAAAAGCATCAGAC 763 Query 7738 CCACATGACTGGCACTGCGTTTCACATTCCACTAGCCAAGTAAGGTCAGGATGAGCCGGA 7797 |||| | ||||| || |||||||| || | ||| |||| || | ||| Sbjct 764 TTACATTTTTCACACTGAGTCTCACATTCAACCAACCATGTAATAGATGGGTTTTTTGGA 823 Query 7798 TCAAAAACCAGTTTTCCGCCGTTCTTCTTTATCCTGTGCTTACCTTTGGTTTCCATGAGT 7857 |||||||| || || || || || ||||| || | ||| |||||| | |||||||| Sbjct 824 TCAAAAACTAGCTTCCCTCCATTTTTCTTAATGCGGTGTTTACCTCTTTGCTCCATGAGC 883 Query 7858 CTGCGTCCCTCCTCGGTTAGAAAAAGACTGTCCGTGTCACCGTAAACCGATTTGAGCGTG 7917 | | | ||||| ||||| | ||| | ||||| ||||| ||||| || ||||| | || Sbjct 884 CGGTGCCCCTCTTCGGTCACAAACAAGCTGTCAGTGTCCCCGTAGACAGATTTTATAGTT 943 Query 7918 CGAGATTCTAAGGGGGTGCCGTAGTCGTCCGCGTACAGAAAAGTAGCCCACTCGGAGATG 7977 | || || | || ||| || ||||| | ||| |||||||| || | Sbjct 944 TTTTGATGTAGTGGCTTTCCTCTGTCTTCGGCGTATAAAAATTCTGCCCACTCAGACACA 1003 Query 7978 AAGGCGCGCGTCCACGCTAACACAAAAGACGCAATGTGCGACGGGTATCTCTTGTTTTCT 8037 || | | ||||| || || ||||| || |||||||| || | ||| || ||||||||| Sbjct 1004 AATACTCTAGTCCAGGCCAAAACAAACGAAGCAATGTGGGAAGCGTACCTGTTGTTTTCT 1063 Query 8038 ATAAGAGGACAAGTCCTTTCTAAGGTGTGAAGGCAAATGTCGTCATCATCTACATCTAGA 8097 || | |||| | | ||||||| ||||| | ||| ||||| ||||| || |||| | Sbjct 1064 ATTAAAGGAGAGTTGTTTTCTAAAGTGTGTAAGCATATGTCATCATCTTCAGTTTCTAAA 1123 Query 8098 AATGTGATTGGCTTATACTTCACATTTACACAGTGGGCGTGGTTTATGGACCTATATAAA 8157 || ||||||||||||||||| | || | ||| | | | || || |||| ||| Sbjct 1124 AACGTGATTGGCTTATACTT-ATATGT-CAC---GTGACTATCTTTGGG---TATAAAAA 1175 Query 8158 GGCGCCTCGTATTCCTCTTCCGTCA-TTGCGTCGCGTGGCGAGACGTCAGCCGGCGTGTC 8216 || | | | ||| | ||| ||| || | || | || ||| || || Sbjct 1176 GG-GTGTGCTCTTCGTTTTCA-TCACTTTCATCTA------ACTCGGCAGAAGG--TGCA 1225 Query 8217 GGCGAGCGGTGAG-TACGTCACTGAAAACTCTGGCATTATCTCCGCACAGAAGTTATCGG 8275 || | ||| || |||| || || |||||||| || || |||| ||||| || | Sbjct 1226 GGTG---GGTAAGCTACGACA-----AATTCTGGCATAATTTCAGCACTAAAGTTGTCAG 1277 Query 8276 TTTCGATGAAGTTTGTACATTTGATGTTTACAAG--ACCTTGGGCAATCAAAGGTTG--- 8330 |||| ||||| || | |||||||| | ||| |||| ||| || |||| Sbjct 1278 TTTCTATGAATGATGAAGATTTGATGG--AAAAGTTACCTCTGGCGAT----GGTTTTTG 1331 Query 8331 ----GCTGTCCTCCAACTGATCTGAAAAAATCACTGTTTTATTGTCTAATTTGGTGGCGA 8386 |||| | || | || |||||||| | | | |||| ||||| ||||| ||||| | Sbjct 1332 ACGCGCTGGCTTCTAGTTGGTCTGAAAACACAATTTTTTTGTTGTCCAATTTAGTGGCAA 1391 Query 8387 ACGAGCCGTAGAGGGCGTTGCTGAGCAGTTTGGCTATGCTACGCATGGTCTGAttttttt 8446 | ||| || | ||||||| || || || |||||||| |||||||| || || |||| Sbjct 1392 AGCTGCCATATAAGGCGTTGGAAAGTAGCTTAGCTATGCTTCGCATGGTTTGGTTCTTTT 1451 Query 8447 CGCGGTCGGCTTTCTCTTTGGCTCCAATGTTTACTTCCACGTAACGTTTACAAAGGCAAG 8506 | ||| ||||| ||||||||||| ||||||| | |||||| ||| | ||| Sbjct 1452 CTTTGTCTGCTTTTTCTTTGGCTCCGATGTTTAGCTGCACGTATTCTTTGGCCACGCACT 1511 Query 8507 CCCATTGAGGAAAAACTGTAtttttttCATCTGGGACTATAGAGACAGACCAGCCGCGAT 8566 ||| | || || | || || |||| ||||| | || || | ||| || | | Sbjct 1512 TCCACTCTGGGAAGATGGTTGTTCTTTCGTCTGGAAGAATGCGCACTGCCCATCCTCTGT 1571 Query 8567 TGTGTAATGTCACGGCGTCAATAGAGGTACACACCTCTCCTCGTAATGATTCATTAGTCC 8626 |||| || || | ||| ||||| ||| || |||||||| || | || ||||||| Sbjct 1572 TGTGCAAAGTAATCAAGTCTATAGAAGTAGCTACTTCTCCTCGCAAAGGCTCGTTAGTCC 1631 Query 8627 AGACGAGTCTTCCACCCTTCCTGCTGCAGAAAGGCGGTAAGACGTCCAAATATTCTTCCG 8686 || || ||||| || || ||| ||| || || || | | || | | | || Sbjct 1632 AGCACAGCCTTCCGCCTTTTCTGGAGCAAAACGGAGGCAGTTCATCAAGAAACAACTCGT 1691 Query 8687 CTGGAGGATCTGCATCCATCACGAAAATTGCTGGGGGCAGTTCGCTT-TCAAAATAGCTT 8745 |||||||||| || || || |||||| |||| | || | || ||||||||| Sbjct 1692 CTGGAGGATCCGCGTCGATGGTGAAAATGCCTGGAAGAAGA-CACTCGTCAAAATAGTCA 1750 Query 8746 ATTTTGGCCG----GTTGATTCAGTCGGTTCTG--CCACCTGGTCAAAGCAATTCCACGA 8799 ||||| | ||| |||| | ||||| ||| ||| ||| | | | Sbjct 1751 ATTTTTTGCTCTAAGTT--TTCAAGCT-TTCTGATCCATTCTGTCGCAGCTAAGGCTCTT 1807 Query 8800 TCTAAAGGGTTCATGGGGGGACCGGTGGGCATTGGATGAGTCAAAGCACTGGCATACATC 8859 || | || || | || | ||| |||| | ||||| || | ||||||||||||||| Sbjct 1808 TCATACGGATTTAAAGGCTGCCCGCTGGGAAAAGGATGCGTTAGAGCACTGGCATACATG 1867 Query 8860 CCACAAATATCATAAACGTAAAGAGGCTGGCTAAGTATTCCCAGGTAAGTGGGGTAACAT 8919 || || || ||||| || |||| ||||| | || || | |||||||| || || Sbjct 1868 CCGCAGATGTCATACACATAAATTGGCTGTTCCATGATGCCAATATAAGTGGGATAGCAG 1927 Query 8920 CTACCTCCTCGGATGCTCTGTCTGACAAAGTCATACATGTGAGTAGAAGGAGCGAGCAAG 8979 | ||| || ||||||||||| | ||| |||||||||| | | ||| || || | || Sbjct 1928 CGACCACCACGGATGCTCTGGCGGACGTAGTCATACATTTCATGAGATGGTGCTAATAA- 1986 Query 8980 TGAACGT---CAAGAGTGGGCTTATCGATATTTAG------TTCTGTGTACAACGTCTGC 9030 ||||| | | ||| |||| ||||| | |||| |||| || | ||| Sbjct 1987 --AACGTTGTCTA-AGTTTGCTT-----TATTTGGCCTAACTTCTCTGTATAATATTTGC 2038 Query 9031 CTAAAAATGGCGTGTGAATTTGAACTGATGGTTGGCCGCTGCAGTACGTTAAAGCGAGAG 9090 ||||||| || || || || || || || || || | || | | |||||| || Sbjct 2039 TTAAAAATTGCATGAGAGTTAGAGCTAATAGTGGGTCTTTGAAAAATGTTAAATGAAGCA 2098 Query 9091 TTTGGCAGCCCCACCGATTCTGAGACG-----AACCGTTCGTACGAGCGACAAAGTTCAT 9145 | || | ||| ||||| | || || ||| || |||| | Sbjct 2099 TCAGGTAAGTTCACT-----TGAGAAGCAATAAAGTTTTTGTAAGATTCTTGGAGTTTGT 2153 Query 9146 GCACCAAAAGTTCTGTGACCTGCACATCTAAAGCACAATAGTCGAGTGTTTCCTGGACAA 9205 || | ||| || ||| ||| ||||||||| || |||| ||||| | Sbjct 2154 TTACTAGGGCCGATGTCACTAACACGTCTTGCACACAATAGTGCAGCGTTTGCTGGATTA 2213 Query 9206 TGTCATACGGTCGTCGACCGCTTA--CAAGCCAAGtttttttATTAAAGAGGTACTCTTC 9263 |||| || | | | || || | ||| || || | | |||||||| Sbjct 2214 TGTCGTAAGCCC--CCACGTTTTTTTCTCTCCACAGAGCCTTGTTGAGTTGATACTCTTC 2271 Query 9264 ATGGTCTTTCCAGTAGGT--GGCTTCTGGGAAGCCATCCTCGTCGGTGCGATAAGAACCC 9321 | ||||||||| | ||||| || ||||||||||| || | ||||| || Sbjct 2272 GCTGGATTTCCAGTATCTTAGGCTT--GGAAAGCCATCCTCATCTTGTTGGTAAGACCCT 2329 Query 9322 AACATGAAAAATTCGTTTACGGCCGTATAAGGACAGCTTCCCTTTTCTACTTTCAGGTTG 9381 | | | ||||| ||||| || || ||||||||||| |||||||| ||| | | Sbjct 2330 ATTCTATAGAATTCATTTACTGCTTCGTACGGACAGCTTCCTTTTTCTACAGGCAGCTCG 2389 Query 9382 TATGCTTTGGCTGCATTTCTCAGACTGGTGTGTGTTAAGGCAAAAGTGTCTCTCACCATA 9441 || || || |||||||| | || ||||| || | |||||||||||||| |||||| Sbjct 2390 TAAGCCCCAGCAGCATTTCTTAAGCTAGTGTGGGTCAGCGCAAAAGTGTCTCTTACCATA 2449 Query 9442 AACTTTACGAACTGGTGTTGAAGATCCGTCTCTTCAATAATTCCGCAACGCCAAGCGTCA 9501 || || || ||||||| | | |||| || | |||| || |||| || | Sbjct 2450 AATTTAACAAACTGGTACTTGTGGTCCGCGGCTGTGAGCTTTCCACACTCCCAATCGGCG 2509 Query 9502 AAGTCTTTTCGTTTCTTGTATCTTGGGTTAGGCAGGGCGAATGTGATGTCGTTGAACAAA 9561 || ||||||||||| | ||| |||| ||||| | | || | ||||| ||||||| Sbjct 2510 AAATCTTTTCGTTTTTCGTACTTTGGATTAGGTAAGCAAAAAGAAATGTCATTGAACAGT 2569 Query 9562 ATCCTGCCGTTTCTGGGCATGAAGTTTCGGCTGACTCTGAAAGCTTTCGGAACTTCCGCT 9621 || | |||||||| ||||| || |||| | | | ||||||| | |||| |||| | Sbjct 2570 ATTTTACCGTTTCTTGGCATAAAATTTCTATTTATTTTGAAAGCAGGCAGAACATCCGTT 2629 Query 9622 CTGTCATGAATGACCTGAGCTGCAAGAACGATTTCATCGAAGCCGCAGATGTTGTGCCCG 9681 |||| || ||||| || || || | ||||| ||||| || |||||||||||||| || Sbjct 2630 CTGTTGTGTATGACTTGCGCGGCCAACACGATCTCATCAAAACCGCAGATGTTGTGGCCA 2689 Query 9682 ACGACATATATTTCTA-AGAATGTAGGCCTTCCGTTTAGCTTTA 9724 | ||||| ||||| | | | ||| || || || ||| |||||| Sbjct 2690 ATTACATAAATTTCAATAAACTGT-GGACTGCCTTTTGGCTTTA 2732 Score = 212 bits (234), Expect = 1e-50 Identities = 389/565 (69%), Gaps = 4/565 (1%) Strand=Plus/Plus Query 10701 AAGACTACAGGCCCCGTAAACCTGAACCTGAAAGACAGTTCGATGGAATCCACATCAATA 10760 || || || || || || | |||||||||||||| | ||| || || || | || Sbjct 3724 AATACCACTGGGCCGGTCACTCTGAACCTGAAAGATATTTCCATAGAGTCAATGTCTGCG 3783 Query 10761 TCGTTCAACT-CCACCTGACGCAAAATCTCTTGCACGTCCCCGCTGTTGTCCCGATACGC 10819 || || |||| |||| || |||||||| |||||| |||||||| || |||| || Sbjct 3784 TCATT-AACTGCCACTTGCTTTAAAATCTCACTCACGTCTCCGCTGTTATCGTGATAAGC 3842 Query 10820 GATATCTTCCATAAACTGCTCTATTTCTTCCTCATCGAGGTCTCCTCGTCCTGCCCTCTC 10879 || ||| ||||||||||||| || ||||||| || | ||||||| ||||| ||||| Sbjct 3843 TATTTCTGCCATAAACTGCTCAATCTCTTCCTGCTCTAACTCTCCTCTCCCTGCTCTCTC 3902 Query 10880 TACCGTAGCCGCTAAGTCGACCCCTACGCGTTGCATAATCTGAACAAACGCATCTTGACC 10939 || || || || ||||| | | | ||| ||| || | | ||| || | || || Sbjct 3903 AACTGTGGCAGCCAAGTCAATGCTAATGCGAGACATGATGTTACTAAAAGCCTGTTCCCC 3962 Query 10940 GTGTTCGTTCCATACACGGCTGTAGATGACTCCCCCATGGGCGTCGCGGGCGCGCATGAC 10999 | ||| ||||| || | |||||| | | | |||| ||| | ||| | ||| || Sbjct 3963 ATTTTCATTCCACACTCTGCTGTACACAATTTGTCCATCTTCGTTTCTGGCTCTCATTAC 4022 Query 11000 AAGCTGAGCGAGGTTAAGTTGCACAAATCTGTTGAAAGGTATA-ACACTTCTAAAGTGAT 11058 | ||| || || ||||| |||| |||| ||||| | | || |||| || | Sbjct 4023 TACCTGCGCCAGATTAAGCATCACATATCTCCCAAAAGGGGAAGATACC-CTAATTTGGT 4081 Query 11059 AGTGTATGTAATTTAGAGTGGTGGCTACGTGTTCCCCCACGAAAAAGTACATGACCCAAC 11118 | || ||| ||||| ||||| || | |||||| |||| |||||| |||| ||||| | Sbjct 4082 GATTTAAGTAGTTTAGTGTGGTAGCAATGTGTTCTGCCACAAAAAAGAACATCACCCAGC 4141 Query 11119 GGCGAATGGTGGATTCGTTAATGTCATCCATCTGCTGAAGACGTCGCATGGTGTCATAAA 11178 | | | || | ||| ||||||||| | | | || | ||| | || ||||||| Sbjct 4142 GTTGGAGAGTTGTTTCATTAATGTCACCTAGCGCCTCCAAACGCTGAATAACCTCATAAA 4201 Query 11179 AGTGGACCGCAAAGTTaaaaaaaCGGTGGTCTCTGGCGGCCACTGTAAGCTCTTCTTCTA 11238 | | || |||||||||||||| | |||| ||| || | ||| || ||||||||||||| Sbjct 4202 AATTTACAGCAAAGTTAAAAAACTGCTGGTTTCTAGCAGACACAGTGAGCTCTTCTTCTA 4261 Query 11239 AAAGACGAATAGCTTCCGCCACCGC 11263 | | ||||| | ||| ||||| || Sbjct 4262 ATAAGCGAATGGTTTCTGCCACAGC 4286 >seq1393656 Length=1543 Score = 212 bits (234), Expect = 1e-50 Identities = 389/565 (69%), Gaps = 4/565 (1%) Strand=Plus/Plus Query 10701 AAGACTACAGGCCCCGTAAACCTGAACCTGAAAGACAGTTCGATGGAATCCACATCAATA 10760 || || || || || || | |||||||||||||| | ||| || || || | || Sbjct 32 AATACCACTGGGCCGGTCACTCTGAACCTGAAAGATATTTCCATAGAGTCAATGTCTGCG 91 Query 10761 TCGTTCAACT-CCACCTGACGCAAAATCTCTTGCACGTCCCCGCTGTTGTCCCGATACGC 10819 || || |||| |||| || |||||||| |||||| |||||||| || |||| || Sbjct 92 TCATT-AACTGCCACTTGCTTTAAAATCTCACTCACGTCTCCGCTGTTATCGTGATAAGC 150 Query 10820 GATATCTTCCATAAACTGCTCTATTTCTTCCTCATCGAGGTCTCCTCGTCCTGCCCTCTC 10879 || ||| ||||||||||||| || ||||||| || | ||||||| ||||| ||||| Sbjct 151 TATTTCTGCCATAAACTGCTCAATCTCTTCCTGCTCTAACTCTCCTCTCCCTGCTCTCTC 210 Query 10880 TACCGTAGCCGCTAAGTCGACCCCTACGCGTTGCATAATCTGAACAAACGCATCTTGACC 10939 || || || || ||||| | | | ||| ||| || | | ||| || | || || Sbjct 211 AACTGTGGCAGCCAAGTCAATGCTAATGCGAGACATGATGTTACTAAAAGCCTGTTCCCC 270 Query 10940 GTGTTCGTTCCATACACGGCTGTAGATGACTCCCCCATGGGCGTCGCGGGCGCGCATGAC 10999 | ||| ||||| || | |||||| | | | |||| ||| | ||| | ||| || Sbjct 271 ATTTTCATTCCACACTCTGCTGTACACAATTTGTCCATCTTCGTTTCTGGCTCTCATTAC 330 Query 11000 AAGCTGAGCGAGGTTAAGTTGCACAAATCTGTTGAAAGGTATA-ACACTTCTAAAGTGAT 11058 | ||| || || ||||| |||| |||| ||||| | | || |||| || | Sbjct 331 TACCTGCGCCAGATTAAGCATCACATATCTCCCAAAAGGGGAAGATACC-CTAATTTGGT 389 Query 11059 AGTGTATGTAATTTAGAGTGGTGGCTACGTGTTCCCCCACGAAAAAGTACATGACCCAAC 11118 | || ||| ||||| ||||| || | |||||| |||| |||||| |||| ||||| | Sbjct 390 GATTTAAGTAGTTTAGTGTGGTAGCAATGTGTTCTGCCACAAAAAAGAACATCACCCAGC 449 Query 11119 GGCGAATGGTGGATTCGTTAATGTCATCCATCTGCTGAAGACGTCGCATGGTGTCATAAA 11178 | | | || | ||| ||||||||| | | | || | ||| | || ||||||| Sbjct 450 GTTGGAGAGTTGTTTCATTAATGTCACCTAGCGCCTCCAAACGCTGAATAACCTCATAAA 509 Query 11179 AGTGGACCGCAAAGTTaaaaaaaCGGTGGTCTCTGGCGGCCACTGTAAGCTCTTCTTCTA 11238 | | || |||||||||||||| | |||| ||| || | ||| || ||||||||||||| Sbjct 510 AATTTACAGCAAAGTTAAAAAACTGCTGGTTTCTAGCAGACACAGTGAGCTCTTCTTCTA 569 Query 11239 AAAGACGAATAGCTTCCGCCACCGC 11263 | | ||||| | ||| ||||| || Sbjct 570 ATAAGCGAATGGTTTCTGCCACAGC 594 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 92888005168680