Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Picea_20abies_20[ConGenIE_20PRJEB1822-1.0_202015-05-12] 10,253,695 sequences; 12,301,475,675 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq220612 125 8e-24 >seq220612 Length=9589 Score = 125 bits (138), Expect = 8e-24 Identities = 251/368 (68%), Gaps = 8/368 (2%) Strand=Plus/Minus Query 14065 ATCAAAGCGACCTGGGCGGAGGAGGGCGTCGTCAAGGATATCAATGCGGTTCGTCGCCGC 14124 |||||| || |||||||| | | || | ||||| |||||| | ||| || || || Sbjct 3258 ATCAAAACGCCCTGGGCGCAACAAAGCAGCATCAAGTATATCAGCCCTGTTGGTTGCAGC 3199 Query 14125 GATGACAACGATGCCCGTCTCGTTATCAAAGCCATCCATCTCAGTCAAGAGTTGATTGAT 14184 || |||| ||| || || | ||||| |||||||| || || | || ||||| | Sbjct 3198 AATCACAATGATACCAGTGTTCCCTTCAAAACCATCCATTTCTGTAAGAAGCTGATTCAG 3139 Query 14185 GGTTTGTTCGCGTTCATCATTCGC---AGGCATACCACCCGCACTGCGTTGCTTACCGAC 14241 ||||||||| || |||||||| | | || ||| | || ||| |||| || Sbjct 3138 GGTTTGTTCTCGCTCATCATTTCCTCCACCTATTCCAGTTCCTCTC---TGCCTACCAAC 3082 Query 14242 GGCGTCAATTTCATCGATGAAAACGATACATGGTTGATTTTCACGGGCAACTTCAAAGAT 14301 || ||||||||||||| |||||| || || || |||||| ||| || || | Sbjct 3081 TGCATCAATTTCATCGACGAAAACAATGCAAGGGGCATTTTCTTTGGCCTTTTTGAACAG 3022 Query 14302 ATCTCGCACTCTCTTGGCACCGACACCCACAAACATCTCCACAAAATTGGCGGCGGAACA 14361 || |||||||| || |||| ||| ||||||||||| ||||| | | | | | | Sbjct 3021 GTCACGCACTCTAGATGCTCCGATACCGACAAACATCTCAACAAACTCAGACCCTG-AGA 2963 Query 14362 TTG-GATGAAGGGGACGTTAGATTCACCCGCGATGGCTCGGGCGAGGAGGGTCTTCCCCG 14420 | | || |||||| || || ||| || || ||||| ||| || | |||||||| | Sbjct 2962 TAGAGAAGAAGGGTACACCAGCTTCCCCTGCAATGGCCTTGGCTAGCAAAGTCTTCCCAG 2903 Query 14421 TCCCTGGT 14428 |||||||| Sbjct 2902 TCCCTGGT 2895 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 539169626024200