Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Picea_20abies_20[ConGenIE_20PRJEB1822-1.0_202015-05-12] 10,253,695 sequences; 12,301,475,675 total letters Query= NC_028105.1 Length=35159 Score E Sequences producing significant alignments: (Bits) Value seq416950 356 5e-94 seq1393656 145 2e-30 >seq416950 Length=5269 Score = 356 bits (394), Expect = 5e-94 Identities = 1102/1680 (66%), Gaps = 50/1680 (3%) Strand=Plus/Plus Query 4980 TCCCAGAGCTCGGTGACGTGCTCTAGGGCA-TCTCGATCCAGCAAGTCTCTTGGTTGCGA 5038 ||||| || || | || || || | |||| | || ||||| || || | ||| | Sbjct 340 TCCCACAGTTCTTTTACATGTTCCACGGCAGTGTC-ATCCAACATACATCGTTGTTTCTT 398 Query 5039 GGGTTGGGGCGGCTTTCGCTGTAGGGCACGAGCCGGTGGGCGTCGAGGGGGGCTAGGGTC 5098 ||||| || | ||||| ||| |||| || |||||| |||| | | | |||||| Sbjct 399 GGGTTTGGTTGCTTTTCGA-GTAAGGCATCAGGCGGTGGCCGTCTATGTCTACAAGGGTC 457 Query 5099 CGGTCCTTCCAGGGCCTGAGCGTGCGCGTCAGCGTGGTTTCGGTGACGGTGAAGGGATGG 5158 ||| ||||| ||||| | |||||||| | || ||||||||||| ||||| || || Sbjct 458 TTGTCTTTCCAAGGCCTCACTGTGCGCGTTAAAGTTGTTTCGGTGACTGTGAACGG--GG 515 Query 5159 GCTCCGGGCTGCG---CGCTGGCGAGGGTGCGCTTGAGGCTCAGGCGACTGGTGCTGAAG 5215 | | ||| | || | |||||||| || || | |||||||| |||||| |||| Sbjct 516 CCGCGTTGCTTTGGTTCG-TAGCGAGGGTCCGTTTTAAACTCAGGCGGCTGGTG-TGAAA 573 Query 5216 CGGGCGTTTTCTTCTCC-CTGCAGGTCGGCCAGGTAGCATTTAAGCATGAGCTCGTAGC- 5273 ||| | || | | |||| ||| | || |||||||||| || || || | Sbjct 574 ---GCGCTGGCTCCCCTGCTGCGCGTCAGACAAGTAGCATTTAGCCAAAGTGTCATAACA 630 Query 5274 TGAGACCGTCGGCCGCGTGTCCCTTGGCGCGCAGCTTGCCTTTGGAGACGTGGCCGCAGC 5333 | | | || | || || ||||| || ||||| || ||||| || || || |||| Sbjct 631 TAATTCAGTAGTT-GCATGACCCTTCGCCCGCAGTTTACCTTTACCCACATGCCCACAGC 689 Query 5334 GCGGGCAGACCAGGCATTTGAGGGCGTAGAGCTTGGGGACCAGGAAGACGGACTGGGGGG 5393 | || || | ||| | || || || || || | || ||||| || | | Sbjct 690 AAGTACAAACAGTGTTTTTTAAAGCATACAGTTTAGGAGCGAGAAAGACAGATTCAGAAC 749 Query 5394 AGTAGGCGTCGGCCCCGCAGGAGGCGCAGACGGTCTCGCACTCTACGAGCCAAGTCAGTT 5453 | || || | | || | || ||||| || || || | ||| || | Sbjct 750 TAAAAGCATCAGACTTACATTTTTCACACTGAGTCTCACATTCAACCAACCATGTAATAG 809 Query 5454 CTGGATGTTCCGGGTCAAAAACGAGACGCCCCCCGTGTTTTTTGATGCGTTTCTCACCTC 5513 ||| | || || |||||||| || ||| || | ||| || ||||| | | ||||| Sbjct 810 ATGGGTTTTTTGGATCAAAAACTAGCTTCCCTCCATTTTTCTTAATGCGGTGTTTACCTC 869 Query 5514 GGGTCTCCATGAGGCGGTGTCCGGCTTCGGTGACGAAGAGGCTGTCGGTGTCGCCGTAGA 5573 ||||||||| ||||| || ||||||| || || | |||||| ||||| ||||||| Sbjct 870 TTTGCTCCATGAGCCGGTGCCCCTCTTCGGTCACAAACAAGCTGTCAGTGTCCCCGTAGA 929 Query 5574 CGGACTTGAGGGGTCGCAGCTCGAGCGGCGTGCCGCGGTCTTCCAGGTAGAGGAACTCGG 5633 | || || | | | | | || ||| | || | |||||| ||| | || || | Sbjct 930 CAGATTTTATAGTTTTTTGATGTAGTGGCTTTCCTCTGTCTTCGGCGTATAAAAATTCTG 989 Query 5634 ACCACTCTGAGACGAAGGCCCGCGTCCAGGCCAACACAAAGGAGGCCACGTGGGAGGGGT 5693 |||||| || || || | | ||||||||||| ||||| || || | |||||| | || Sbjct 990 CCCACTCAGACACAAATACTCTAGTCCAGGCCAAAACAAACGAAGCAATGTGGGAAGCGT 1049 Query 5694 AGCGGTCGTTGTCCACCAGAGGGTCCACCTTCTCCACCGTGTGCAGGCACAGGTCCCCCT 5753 | | || ||| || | | ||| || || | ||||| | ||| | ||| | | Sbjct 1050 ACCTGTTGTTTTCTATTAAAGGAGAGTTGTTTTCTAAAGTGTGTAAGCATATGTCATCAT 1109 Query 5754 CCTCGGCGTCCAGGAACGTGATTGGCTTGTAAGTGTATGTCACGTGACTTGCTTCCGGGG 5813 | || | || | |||||||||||||| || | |||||||||||||| ||| || Sbjct 1110 CTTCAGTTTCTAAAAACGTGATTGGCTTATACTTATATGTCACGTGACTATCTTTGGG-- 1167 Query 5814 GCGGCGGGCTATAAAAGGGGGCGGTGC-CGGGGTCCTCGTCACTTTCTTCCGCGTCGCTG 5872 ||||||| ||| |||| | || || |||||||| || ||| Sbjct 1168 ---------TATAAAAAGGGT--GTGCTCTTCGTTTTCATCACTTTCATCTAACTCG--- 1213 Query 5873 TGGACGATCGCCAGCTGATCGGGTGAGTA-GAGGCGTTCGAAGGCGGGCATGACGTCGGC 5931 | || || || | |||| ||| | || | || | ||||| | || || Sbjct 1214 --GCAGA-----AGGTG--CAGGTGGGTAAGCTACGA-CAAATTCTGGCATAATTTCAGC 1263 Query 5932 ACTCAGTGTGTCAGTTTCTACAAACGAGGAGGATTTGATGTAAACCTGCCCCGAGGCGAT 5991 ||| | |||||||||||| || || || ||||||||| ||| | || |||||| Sbjct 1264 ACTAAAGTTGTCAGTTTCTATGAATGATGAAGATTTGATGGAAAAGTTACCTCTGGCGAT 1323 Query 5992 GCTTTTGAGGAGGGCGGGGTCC-ATCTGGTCGGCAAAAACGATTTTCTTGTTGTCGAGCT 6050 | |||| | | || || | | | ||||| | ||| || ||||| |||||||| | | Sbjct 1324 GGTTTTT-GACGCGCTGGCTTCTAGTTGGTCTGAAAACACAATTTTTTTGTTGTCCAATT 1382 Query 6051 TGGTGGCGAACGACCCGTAGAGGGCGTTGGAGAGCAGTTTGGCGATGGAGCGCAGGGTCT 6110 | ||||| || || || | ||||||||| || || || || ||| |||| ||| | Sbjct 1383 TAGTGGCAAAGCTGCCATATAAGGCGTTGGAAAGTAGCTTAGCTATGCTTCGCATGGTTT 1442 Query 6111 GGTTCTTGTCGCGGTCGGCCTTTTCCTTGGCGGCGATGTTGAGCTGCACGTACTCGCGCG 6170 ||||||| || ||| || ||||| ||||| ||||||| ||||||||||| || | Sbjct 1443 GGTTCTTTTCTTTGTCTGCTTTTTCTTTGGCTCCGATGTTTAGCTGCACGTATTCTTTGG 1502 Query 6171 CCAGACAGCGCCAGGCTGGAAAGACGGTTGTGCGTTCGTCGGGCAGCAGGCGCACGCGCC 6230 ||| || ||| |||| |||| |||||| | |||||| || || | |||||| || Sbjct 1503 CCACGCACTTCCACTCTGGGAAGATGGTTGTTCTTTCGTCTGGAAGAATGCGCACTGCCC 1562 Query 6231 AGCCGCGGTTGTGCAGGGTGGCCAGGTCCACGCTGGTGGCCACCTCTCCGCGCAGACGTT 6290 | || | |||||||| || || ||| | || || || ||||| |||| | | | Sbjct 1563 ATCCTCTGTTGTGCAAAGTAATCAAGTCTATAGAAGTAGCTACTTCTCCTCGCAAAGGCT 1622 Query 6291 CGTTGGTCCAGCAGAGGCGGCCGCCCTTGCGCGAGCAGAAGGGGGGAAGCACGTCGAGGC 6350 |||| |||||||| || | ||||| || | ||||| || || || || | || || Sbjct 1623 CGTTAGTCCAGCACAGCCTTCCGCCTTTTCTGGAGCAAAACGGAGGCAGTTCATCAAGAA 1682 Query 6351 GGTTCTCGTCTGGGGGGTCGGCGTCGATGGTAAAGATGCCTGGCAGCAGGCGCCGATCAA 6410 ||||||||| || || ||||||||||| || |||||||| || || | | |||| Sbjct 1683 ACAACTCGTCTGGAGGATCCGCGTCGATGGTGAAAATGCCTGGAAGAAGACACTCGTCAA 1742 Query 6411 AGTAGTCGACGGGCGTGCGC-ATGTCGTCCAG-GGCCAGTTGCCAGTCTCGGGCGGCCAG 6468 | ||||| | ||| | | || || || | | | ||| ||| || || | Sbjct 1743 AATAGTC-AATTTTTTGCTCTAAGTTTTCAAGCTTTCTGAT-CCATTCTGTCGCAGCTAA 1800 Query 6469 CGCGCGCTCGTAGGGATTGAGCGGCGGTCCCCAGGGCATGGGATGGGTAAGGGCCGAGGC 6528 || | || || ||||| | ||| | || | ||| | ||||| || || || ||| Sbjct 1801 GGCTCTTTCATACGGATTTAAAGGCTGCCCGCTGGGAAAAGGATGCGTTAGAGCACTGGC 1860 Query 6529 ATACATGCCGCAGATGTCGTAGACGTAGAGGGGCTCCTCCAGCACGCCGATGTAAGTGGG 6588 |||||||||||||||||| || || || | |||| |||| | ||| || |||||||| Sbjct 1861 ATACATGCCGCAGATGTCATACACATAAATTGGCTGTTCCATGATGCCAATATAAGTGGG 1920 Query 6589 GTAGCAGCGGCCGCCGCGGATGCTGGCGCGTACGTAATCGTACATCTCGTGCGAGGGGGC 6648 |||||||| || || |||||||| ||| ||||| || ||||| || || || || || Sbjct 1921 ATAGCAGCGACCACCACGGATGCTCTGGCGGACGTAGTCATACATTTCATGAGATGGTGC 1980 Score = 147 bits (162), Expect = 4e-31 Identities = 409/622 (66%), Gaps = 8/622 (1%) Strand=Plus/Plus Query 8515 CGGTTGAGGTCCTGGATCTGCCTTCTCTGGGTGAACACCACGGGCCCCGTGAGCTTGAAC 8574 ||||||| || ||| |||| || || || ||||| || || || | ||||| Sbjct 3691 CGGTTGATGTTCTGAATCTCCCGCAGGCCGGAAAATACCACTGGGCCGGTCACTCTGAAC 3750 Query 8575 CTGAAAGAGAGTTCGACAGAATCAATCTCGGTGTCGTTAACGGCCGCCTGGCGGAGAATC 8634 |||||||| | ||| | ||| ||||| || | ||| ||||| ||| | || | |||| Sbjct 3751 CTGAAAGATATTTCCATAGAGTCAATGTCTGCGTCATTAACTGCCACTTGCTTTAAAATC 3810 Query 8635 TCCTGGACGTCGCCCGAGTTGTCTTGGTAGGCGATCTCTGCCATGAACTGCTCCACCTCT 8694 || ||||| || ||| || || || || || |||||||| |||||||| | |||| Sbjct 3811 TCACTCACGTCTCCGCTGTTATCGTGATAAGCTATTTCTGCCATAAACTGCTCAATCTCT 3870 Query 8695 TCCTCTTGGAGCTCTCCGCGACCGGCGCGCTCGACGGTGGCGGCCAGGTCGTTGGAGATG 8754 |||| | | |||||| | || || | ||| || ||||| |||| ||| || ||| Sbjct 3871 TCCTGCTCTAACTCTCCTCTCCCTGCTCTCTCAACTGTGGCAGCCAAGTCAATGCTAATG 3930 Query 8755 CGGTTCATGA-GCTGGGAAAA-CGCGTTCAGCCCGCTCTCGTTCCAGACGCGGCTGTAGA 8812 || ||||| | | |||| | |||| ||| | || ||||| || | |||||| | Sbjct 3931 CGAGACATGATGTTACTAAAAGCCTGTTC--CCCATTTTCATTCCACACTCTGCTGTACA 3988 Query 8813 CCACGTCGCCCTCGGCGTCGCGTGCGCGCATGACCACCTGAGCCAGGTTGAGCTCCACGT 8872 | | | || || ||| | || | ||| || ||||| ||||| || ||| ||| | Sbjct 3989 CAATTTGTCCATCTTCGTTTCTGGCTCTCATTACTACCTGCGCCAGATTAAGCATCACAT 4048 Query 8873 GCCGGGCGAACACGGCGTAGTTGCGC--AGGCGTTGGAAGAGGTAGTTGAGCGTGGTGGC 8930 | | | | || | || | | | | | || | |||||| || ||||| || Sbjct 4049 ATC--TCCCAAAAGGGGAAGATACCCTAATTTGGTGATTTAAGTAGTTTAGTGTGGTAGC 4106 Query 8931 CACGTGCTCGGAGACGAAGAAGTACATGATCCAGCGGCGCAGCGTCAGCTCGTTGACGTC 8990 | ||| || | || || ||| |||| | |||||| | || || || || | ||| Sbjct 4107 AATGTGTTCTGCCACAAAAAAGAACATCACCCAGCGTTGGAGAGTTGTTTCATTAATGTC 4166 Query 8991 GCCCAGCGCTTCCAACCGTGCCATGGCCTCGTAAAAATCCACCGCAAAATTAAAAAACTG 9050 || ||||| ||||| || || |||| ||||||| || ||||| ||||||||||| Sbjct 4167 ACCTAGCGCCTCCAAACGCTGAATAACCTCATAAAAATTTACAGCAAAGTTAAAAAACTG 4226 Query 9051 CGAATTGCGGGCCGACACCGTCAGTTCCTCCTCCAGCAAGCGGATGACCTCGGCGACCGT 9110 | || | || ||||| || || || || || | ||||| ||| || || || | Sbjct 4227 CTGGTTTCTAGCAGACACAGTGAGCTCTTCTTCTAATAAGCGAATGGTTTCTGCCACAGC 4286 Query 9111 TTGACGTACTTCGCGTTCAAAG 9132 | ||||||| ||||||| Sbjct 4287 GGTCCTAACTTCGCTTTCAAAG 4308 >seq1393656 Length=1543 Score = 145 bits (160), Expect = 2e-30 Identities = 389/589 (66%), Gaps = 8/589 (1%) Strand=Plus/Plus Query 8548 AACACCACGGGCCCCGTGAGCTTGAACCTGAAAGAGAGTTCGACAGAATCAATCTCGGTG 8607 || ||||| || || || | ||||||||||||| | ||| | ||| ||||| || | | Sbjct 32 AATACCACTGGGCCGGTCACTCTGAACCTGAAAGATATTTCCATAGAGTCAATGTCTGCG 91 Query 8608 TCGTTAACGGCCGCCTGGCGGAGAATCTCCTGGACGTCGCCCGAGTTGTCTTGGTAGGCG 8667 || ||||| ||| | || | |||||| ||||| || ||| || || || || Sbjct 92 TCATTAACTGCCACTTGCTTTAAAATCTCACTCACGTCTCCGCTGTTATCGTGATAAGCT 151 Query 8668 ATCTCTGCCATGAACTGCTCCACCTCTTCCTCTTGGAGCTCTCCGCGACCGGCGCGCTCG 8727 || |||||||| |||||||| | |||||||| | | |||||| | || || | ||| Sbjct 152 ATTTCTGCCATAAACTGCTCAATCTCTTCCTGCTCTAACTCTCCTCTCCCTGCTCTCTCA 211 Query 8728 ACGGTGGCGGCCAGGTCGTTGGAGATGCGGTTCATGA-GCTGGGAAAA-CGCGTTCAGCC 8785 || ||||| |||| ||| || ||||| ||||| | | |||| | |||| || Sbjct 212 ACTGTGGCAGCCAAGTCAATGCTAATGCGAGACATGATGTTACTAAAAGCCTGTTC--CC 269 Query 8786 CGCTCTCGTTCCAGACGCGGCTGTAGACCACGTCGCCCTCGGCGTCGCGTGCGCGCATGA 8845 | | || ||||| || | |||||| || | | || || ||| | || | ||| | Sbjct 270 CATTTTCATTCCACACTCTGCTGTACACAATTTGTCCATCTTCGTTTCTGGCTCTCATTA 329 Query 8846 CCACCTGAGCCAGGTTGAGCTCCACGTGCCGGGCGAACACGGCGTAGTTGCGC--AGGCG 8903 | ||||| ||||| || ||| ||| | | | | | || | || | | | | | Sbjct 330 CTACCTGCGCCAGATTAAGCATCACATATC--TCCCAAAAGGGGAAGATACCCTAATTTG 387 Query 8904 TTGGAAGAGGTAGTTGAGCGTGGTGGCCACGTGCTCGGAGACGAAGAAGTACATGATCCA 8963 || | |||||| || ||||| || | ||| || | || || ||| |||| | ||| Sbjct 388 GTGATTTAAGTAGTTTAGTGTGGTAGCAATGTGTTCTGCCACAAAAAAGAACATCACCCA 447 Query 8964 GCGGCGCAGCGTCAGCTCGTTGACGTCGCCCAGCGCTTCCAACCGTGCCATGGCCTCGTA 9023 ||| | || || || || | ||| || ||||| ||||| || || |||| || Sbjct 448 GCGTTGGAGAGTTGTTTCATTAATGTCACCTAGCGCCTCCAAACGCTGAATAACCTCATA 507 Query 9024 AAAATCCACCGCAAAATTAAAAAACTGCGAATTGCGGGCCGACACCGTCAGTTCCTCCTC 9083 ||||| || ||||| |||||||||||| || | || ||||| || || || || || Sbjct 508 AAAATTTACAGCAAAGTTAAAAAACTGCTGGTTTCTAGCAGACACAGTGAGCTCTTCTTC 567 Query 9084 CAGCAAGCGGATGACCTCGGCGACCGTTTGACGTACTTCGCGTTCAAAG 9132 | ||||| ||| || || || | | ||||||| ||||||| Sbjct 568 TAATAAGCGAATGGTTTCTGCCACAGCGGTCCTAACTTCGCTTTCAAAG 616 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 98702639160390