Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Picea_20abies_20[ConGenIE_20PRJEB1822-1.0_202015-05-12] 10,253,695 sequences; 12,301,475,675 total letters Query= NC_028108.1 Length=171454 Score E Sequences producing significant alignments: (Bits) Value seq181384 95.1 1e-14 >seq181384 Length=11157 Score = 95.1 bits (104), Expect = 1e-14 Identities = 333/517 (64%), Gaps = 6/517 (1%) Strand=Plus/Plus Query 79293 CTCGTTGAAAGCCTCCCCATAGACATCGGGCAGGCCCGGGCACTCGTGCGGGCACATCAG 79352 |||| ||| |||| || || | |||| ||||| |||| ||||| ||| | | ||| Sbjct 4724 CTCGGCGAACGCCTTGCCGTAAAGATCGTGCAGGTCCGGCGTCTCGTCCGGCGAGAACAG 4783 Query 79353 GTGCCAGTCCTCGTCCTTCTCAACCTTCTCCATGAAGAGGTCCGGGATCCACAGGGCCGT 79412 ||| || | || ||| || || |||||| || ||||| | ||| || || Sbjct 4784 CGTCCATTCGCCATCAGCCTCGACGCGCTGCATGAACAGATCCGGCACCCAGTTCGCGGT 4843 Query 79413 GAAGAGGTCGCGGCAACGCATCTCCTCGTCGCCCTGGTTCAGACGCAGCTCGAGAAAGTC 79472 | | |||| || || ||||| || |||| ||||| ||||| || || Sbjct 4844 GTTCATGTCGTGGGTGCGGCGGCGGTCGTCACCAGTGTTCTTGCGCAGGTCGAGGAATTC 4903 Query 79473 CATGATGTCGGCGTGCCACGGCTCCAGATAGATGGCGAACGAACCCTTGCGCTTGCCGCC 79532 | ||||||| | ||||| | ||| |||||| | || || ||||||||||| ||| Sbjct 4904 CTCGATGTCGACATGCCATGTCTCGAGATAGGCGCAGACCGCGCCCTTGCGCTT---GCC 4960 Query 79533 GCCCTGGTTGACGTACCGGGCCGTGTTGTTGAAAACTCGGAGCATGGGCACGATGCCGTC 79592 |||||| ||||| || |||| |||| ||| || | ||||| | ||| | Sbjct 4961 GCCCTGATTGACCGCGATCGCGGTGTCGTTGGCGACTTTCAGGAACGGCACCACGCCCTG 5020 Query 79593 GGCGACGCCGTTCGTCCCGTTGATTCGTGTACCGCTCGCCCGAATGTTCGAGCAGTGGAT 79652 | ||||||| || || ||||| | | ||| | || | | | |||| | | Sbjct 5021 GCTTTCGCCGTTGGTGCCCTTGATGTGCGCGCCGAGGCCGCGCACGCGGGTCCAGTCGTT 5080 Query 79653 TCCGATGCCCCCGGACCACTTGGAGATGTGCGCGCACTCCTTGAGCGTCTCGTAGATGCC 79712 |||| || ||||| | || | | ||||| ||||| | || || | ||||||| Sbjct 5081 GCCGAGACCGCCGGAATATTTCGCCAGCAGCGCGTTGTCCTTCACCGACTTGAAGATGCC 5140 Query 79713 CTCGATCGAGTCGTCCTTCATAGCGACCAGGAAGCAGCTCGACATCTGTGGGTTGTTCGT 79772 |||| || ||||| || | | |||||||||| ||| | ||| || ||| Sbjct 5141 GTCGA--GA-TCGTCGGCCACCGTGGTCAGGAAGCAGGACGAGAGCTGCGGCCGCAGCGT 5197 Query 79773 ACCGGCGTTGAAGAGGGTCGGCGTCGCGTGCGTGAAG 79809 ||||| |||||| || |||||||||| | | ||||| Sbjct 5198 ACCGGAGTTGAACAGCGTCGGCGTCGAGGCCATGAAG 5234 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478219725010800