Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Picea_20abies_20[ConGenIE_20PRJEB1822-1.0_202015-05-12] 10,253,695 sequences; 12,301,475,675 total letters Query= NC_028656.1 Length=65955 Score E Sequences producing significant alignments: (Bits) Value seq8709189 354 3e-93 seq6916087 141 3e-29 seq7932 82.4 3e-11 >seq8709189 Length=223 Score = 354 bits (392), Expect = 3e-93 Identities = 202/206 (98%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 33419 CGTAAGTAAAATCAGCCACCCACAGCTGGTCAGGTCGTTCTGCCACGAACTGACGGTTTA 33478 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 18 CGTAAGTAAAATCAGCCACCCACAGCTGGTCAGGTCGTTCTGCCACGAACTGACGGTTTA 77 Query 33479 CGCGGTCGCCTGCGGCAACGGCTTTCCGGCTGATGGTCGTACGGACCTTTTTACCCCGGA 33538 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 78 CGCGGTCGCCTGCGGCAACGGCTTTCCGGCTGATGGTCGTACGGACCTTTTTACCCCGGA 137 Query 33539 GAACACCGGCAAGTCCCATAACCGCCATGAGACGTGCCACTGTACATCTGGCCACCCTGA 33598 |||||||||||||||||||||||||||||||||||||||| || ||||||||||| |||| Sbjct 138 GAACACCGGCAAGTCCCATAACCGCCATGAGACGTGCCACAGTGCATCTGGCCACTCTGA 197 Query 33599 TTCCTTCCCGTAACAACTGACGCCAG 33624 | |||||||||||||||||||||||| Sbjct 198 TACCTTCCCGTAACAACTGACGCCAG 223 >seq6916087 Length=260 Score = 141 bits (156), Expect = 3e-29 Identities = 88/92 (96%), Gaps = 2/92 (2%) Strand=Plus/Plus Query 33337 GATGAGACCCGCCACCCCACGATGTATCCGGCAAACACATCAATGATAAACGCCACATAG 33396 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct 1 GATGAGACCCGCCACCCCACGATGTATCCGGCAAACACATCAATGATGAACGCCACATAG 60 Query 33397 ACGAAGCCCTGCCATGTGCTGACGTA-AGTAA 33427 ||||||||| |||||||||||| ||| ||||| Sbjct 61 ACGAAGCCCCGCCATGTGCTGA-GTAGAGTAA 91 >seq7932 Length=53400 Score = 82.4 bits (90), Expect = 3e-11 Identities = 45/45 (100%), Gaps = 0/45 (0%) Strand=Plus/Minus Query 65796 GTTCCAGCTCTTTTTCACCATCCTGGCGGATATGCTCATGAATTG 65840 ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 51702 GTTCCAGCTCTTTTTCACCATCCTGGCGGATATGCTCATGAATTG 51658 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 185250473094030