Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Picea_20abies_20[ConGenIE_20PRJEB1822-1.0_202015-05-12] 10,253,695 sequences; 12,301,475,675 total letters Query= NC_028785.1 Length=72790 Score E Sequences producing significant alignments: (Bits) Value seq2171 313 1e-80 >seq2171 Length=73796 Score = 313 bits (346), Expect = 1e-80 Identities = 582/850 (68%), Gaps = 21/850 (2%) Strand=Plus/Plus Query 64055 GACGTCATTCCCACCGGCTCTATCGCTCTGGACGGCGCTCTGGGCATCGGGGGGTACCCG 64114 || |||||||| | ||||| | | ||||| ||| || ||| |||| || ||| Sbjct 10848 GAGGTCATTCCGTCGGGCTCGCTTGGGCTGGATATCGCGCTCGGCGTCGGCGGTCTGCCG 10907 Query 64115 AGGGGCCGGGTGGTGGAAATCTACGGCCCAGAATCTTCAGGGAAGTCAACTCTGTGTCTC 64174 | ||| |||||||| || |||||||| || ||||| || || ||| | || || || Sbjct 10908 AAGGGACGGGTGGTCGAGATCTACGGGCCGGAATCCTCCGGCAAGACCACGCTCGCGCTG 10967 Query 64175 CACGCGGTGGCCAATGCGCAGAAGGCCGGTGGCAACGCCGCCTACATCGACGCTGAGCAC 64234 || |||||||| | || |||||| || |||| | ||||| |||||||| || ||| Sbjct 10968 CATACGGTGGCCGAAGCCCAGAAGAAAGGCGGCATCTGCGCCTTTATCGACGCCGAACAC 11027 Query 64235 TCCCTGGACCCTGAGTACGCCAAGGCGCTCGGTGTGGACCTCGACAACCTCGTGGTGGTT 64294 | || || || | || ||| |||||| || | |||| | || || | Sbjct 11028 GCGCTCGATCCGGTCTATGCCCGCAAGCTCGGCGTCAATGTCGATGAACTTCTGATTTCG 11087 Query 64295 CAGCCGGACACTGGCGAGCAGGCCCTGGAGATCGTTGACCTCCTCGTCAAGTCTGGCGAG 64354 ||||| ||| ||||||||||| ||||| |||| ||| || || || |||| | Sbjct 11088 CAGCCCGACCACGGCGAGCAGGCGCTGGAAATCGCCGACACGCTGGTGCGCTCGGGCGCG 11147 Query 64355 CTGTCCATCGTCG--TCGTTGACTCTGTGGCGGCCCTGGTGCCGCGCGCCGAGCTCGAAG 64412 ||| || | |||| ||||| |||||||| ||||||||||||||||| ||||| | Sbjct 11148 --GTCGATGTGCTGATCGTGGACTCGGTGGCGGCGCTGGTGCCGCGCGCCGAACTCGAGG 11205 Query 64413 GCGACATCGGGGACAGTCACGTCGGCCTGCACGCGCGCCTCATGTCGCAGGCCATGCGCA 64472 | || || || ||| | || |||| ||||| || ||| ||||| |||||| Sbjct 11206 GTGAGATGGGCGACGCGCTGCCGGGATTGCAGGCGCGACTGATGAGCCAGGCGCTGCGCA 11265 Query 64473 AGCTCACCGGCACCATCTCCAGCACCAACACGCTGACGCTCTGGGTCAACCAGTTGCGCG 64532 |||| |||| | | ||| || || | || || | ||| |||||||| | ||| Sbjct 11266 AGCTGACCGCCTCGATCAACAAGTCCCATACCATGGTGATCTTCATCAACCAGATCCGCA 11325 Query 64533 AGAAGATCGGCAACGTGGGCTACGGCCCGAACGAGACCACCACGGGCGGCAAGGCTTTGA 64592 ||||||||| ||| |||||| || || |||||||| |||||||| || ||| Sbjct 11326 TGAAGATCGGT---GTGATGTACGGCTCGCCGGAAACCACCACCGGCGGCAATGCGCTGA 11382 Query 64593 GGTTCTACGCCTCAGTCCGCATGGATGTCCGTCGCATCGCCACCGA-GAAGGAAGGCGAT 64651 |||||||||||| || ||| | ||| |||| ||||||| | | || ||||| |||| Sbjct 11383 AGTTCTACGCCTCGGTGCGCCTCGATATCCGCCGCATCGGC-CAGATCAAGGAGCGCGAC 11441 Query 64652 GAGGCTGTCGGCAACCGCACCCGGGTGAAGGTCGTCAAGAACAAGCTGGCCCCGCCGCAC 64711 || | ||||||||| |||||||| ||||| || |||||||||||||| |||||| | Sbjct 11442 GAAGTCGTCGGCAACTCGACCCGGGTCAAGGTGGTGAAGAACAAGCTGGCGCCGCCGTTC 11501 Query 64712 CGCAACGCCGAGTTCTCCGTCGTGTACGGGGAGGGCATCTCGCGTGAGGTCGAACTCCTC 64771 | | ||| ||| | || ||||||| |||||| ||||| || |||| ||||| Sbjct 11502 AAGCAGGTCGAATTCGACATCATGTACGGCGAGGGCGTCTCGAAGATGGGCGAAATCCTC 11561 Query 64772 GACCTGGCCGTGTCGCAGGGCCTGGTGAAGAAGTCGGGCGCCTGGTTCAAGTACGGGGAC 64831 ||||| | ||| | ||| | || ||||||| || ||||||||| |||| | Sbjct 11562 GACCTCGGCGTCAAGGCCGGCATCGTCGAGAAGTCCGGTGCCTGGTTCTCCTACGATAGC 11621 Query 64832 AAGAACGTCGCCCAGGGC------AAGCCCAAGGCCGTCCAGTGGCTCAAGGCCAACCCG 64885 || | ||| |||||| || ||||||| || |||||||| ||||| Sbjct 11622 CAGCGCCTCGGGCAGGGCCGCGAGAATTCCAAGGC------GTTCCTCAAGGCGAACCCC 11675 Query 64886 GACATCACCG 64895 || || |||| Sbjct 11676 GAGATTACCG 11685 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 203710503967145