Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Picea_20abies_20[ConGenIE_20PRJEB1822-1.0_202015-05-12] 10,253,695 sequences; 12,301,475,675 total letters Query= NC_028827.1 Length=50165 Score E Sequences producing significant alignments: (Bits) Value seq3094 141 3e-29 >seq3094 Length=68251 Score = 141 bits (156), Expect = 3e-29 Identities = 231/328 (70%), Gaps = 6/328 (2%) Strand=Plus/Minus Query 40090 GCCGAAGGTCCCGATCTGTGCGACCTTGTCGGCCCCGTACTTCTCGGTGACGTACCGGAT 40149 ||||||||| |||||| | |||| ||| ||||| ||| || || ||||| Sbjct 58420 GCCGAAGGTGATGATCTGGCCCACCTGCTCGCGGCCGTAGCGCTCTTGCACATAGCGGAT 58361 Query 40150 GACCTCGCCGCGACG--CCGGTCATCGAAGTCGATGTCAACGTCGGGCATGGACACGCGC 40207 ||||||||||| || || | || |||||||||||| | ||| ||||| || ||||| Sbjct 58360 CACCTCGCCGCGGCGGTCCTGACA--GAAGTCGATGTCGAAGTCCGGCATCGAGACGCGT 58303 Query 40208 TCGGGGTTCAGGAACCGCTCGAAGATGAGCCCGTGCTCCAGTGGATCGAGGTCGGTGATC 40267 |||||||| || || |||||||| | || ||| | | |||||||| |||||||| Sbjct 58302 TCGGGGTTGAGAAAGCGCTCGAACAGCAGACCGAACCGGATCGGATCGAGATCGGTGATG 58243 Query 40268 CCGAGGCAGTAGGCGACCAGCGAACCGGCTGCCGAGCCTCGCCCAGGACCGACCCACACG 40327 || |||||| |||||||| || || |||| || || || || || ||| | | Sbjct 58242 GTCAGCGCGTAGGCAACCAGCGAGCCTGCGCCCGAACCGCGGCCCGGTCCCACCGGAATG 58183 Query 40328 CCGTTCTCCTTGGCCCAGCCGATGAAGTCGGCGACGACCAGGAAGTAGGACGGGA-AGCC 40386 || | | ||| ||||| ||||||||| | |||| ||||||||| | ||||| | Sbjct 58182 CCATGCGACTTCGCCCACTTGATGAAGTCCGACACGATCAGGAAGTA-GCCGGGATATTT 58124 Query 40387 CATCTGGATGATCATGTCGATCTCGTAC 40414 ||| | |||| | |||||| ||| || Sbjct 58123 CATGCGCGTGATGACGTCGATTTCGAAC 58096 Score = 104 bits (114), Expect = 7e-18 Identities = 227/336 (68%), Gaps = 12/336 (4%) Strand=Plus/Minus Query 39023 GCCGCCATGTACTCGGCCGGGTAGTGCGTCTTCAGGTACGCCGTGCGGTAGGCGATGAGC 39082 ||||| ||| |||| |||| || |||| ||||| ||| || || || | | | |||| Sbjct 59442 GCCGCGATGAACTCCACCGGATAATGCGCCTTCATGTAGGCGGTCTGGAACGACACGAGC 59383 Query 39083 CCGTACGCCGCAGAGTGCGCCTTGTTGAAGGCGTACCCGGCGAAGGGTACGAGCACGTCC 39142 |||| || || | ||| |||||||||| |||| | ||||| |||||| || Sbjct 59382 GCGTAAGCGGCGGCGTGGCTCTTGTTGAAGCCGTAGTCCGCGAACTTGGCGAGCAGTTCG 59323 Query 39143 CACACCGCCTG-GATGGCGCTGTCCGA--GTAGC-CTCGCTCGCGC--GCTCCCTTCTGG 39196 | | || ||| | || || || | || | || | |||||| || | | Sbjct 59322 AAGATCGTCTGCGCCTGCCCTTTCGGCACGTTGTTCTTGGTCGCGCCGGCGAC------G 59269 Query 39197 AAGTTCACGAACTCCTTGGCCAGAACCTCGGGCTTCTTCTTGCCCATGGCCCGACGCAGC 39256 ||| || || || |||| ||| || || | ||||||||||||| || || |||||| Sbjct 59268 AAGATCTCGCGCTGCTTGTCCATTTCCGCGCGGATCTTCTTGCCCATCGCGCGGCGCAGC 59209 Query 39257 AGGTCGGCCTGGCCCAGGCTGTAGCCAGCGAGGATCTGCGCCGCCTTCTGCACCTGCTCC 39316 |||||||| | ||| || ||||| || | || |||||| || | |||||| ||| Sbjct 59208 AGGTCGGCGTCGCCGAGCGAATAGCCGGCCATGACCTGCGCGATCTGCATCACCTGTTCC 59149 Query 39317 TGGTAGATGATGAGCCCGTACGTCGGGTCCAGGATC 39352 || |||||||||| ||| | ||| | ||||||| Sbjct 59148 TGATAGATGATGACGCCGAAGGTCTCCTTCAGGATC 59113 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 140874895167930