Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Picea_20abies_20[ConGenIE_20PRJEB1822-1.0_202015-05-12] 10,253,695 sequences; 12,301,475,675 total letters Query= NC_028976.1 Length=50113 Score E Sequences producing significant alignments: (Bits) Value seq3094 136 1e-27 >seq3094 Length=68251 Score = 136 bits (150), Expect = 1e-27 Identities = 226/324 (70%), Gaps = 2/324 (1%) Strand=Plus/Minus Query 39429 TGCCGTACGTCGCGATCTGTGCGACCTTGTCGCTGCCGTACTTCTCGGTGACGTACCGGA 39488 ||||| | || |||||| | |||| |||| |||||| ||| || || |||| Sbjct 58421 TGCCGAAGGTGATGATCTGGCCCACCTGCTCGCGGCCGTAGCGCTCTTGCACATAGCGGA 58362 Query 39489 TCACGTCGCCACGGCGACGGTCATCGAAGTCGATGTCCACGTCGGGCATGGAGACGCGCT 39548 |||| ||||| ||||| | | |||||||||||| | ||| ||||| |||||||| | Sbjct 58361 TCACCTCGCCGCGGCGGTCCTGACAGAAGTCGATGTCGAAGTCCGGCATCGAGACGCGTT 58302 Query 39549 CAGGGTTCAGGAACCGCTCGAAGATGAGCCCGTGAGGGATGGGGTCCAGGTCGGTGATCC 39608 | ||||| || || |||||||| | || ||| |||| || || || |||||||| Sbjct 58301 CGGGGTTGAGAAAGCGCTCGAACAGCAGACCGAACCGGATCGGATCGAGATCGGTGATGG 58242 Query 39609 CGAGGGCGTACGCGGCCAGCGAGCCAGCCGCAGAGCCACGCCCAGGGCCGACCCACACAC 39668 || ||||| || |||||||||| || | || || || || || || ||| | | Sbjct 58241 TCAGCGCGTAGGCAACCAGCGAGCCTGCGCCCGAACCGCGGCCCGGTCCCACCGGAATGC 58182 Query 39669 CGTTCTCCTTCGCCCAGCCGATGAAGTCGGCGACGACGAGGAAGTACGACGGGA-ACCCC 39727 | | | ||||||||| ||||||||| | |||| |||||||| | ||||| | | Sbjct 58181 CATGCGACTTCGCCCACTTGATGAAGTCCGACACGATCAGGAAGTA-GCCGGGATATTTC 58123 Query 39728 ATCTGGTTGATCATGTCGATCTCG 39751 || | |||| | |||||| ||| Sbjct 58122 ATGCGCGTGATGACGTCGATTTCG 58099 Score = 104 bits (114), Expect = 7e-18 Identities = 117/157 (75%), Gaps = 0/157 (0%) Strand=Plus/Minus Query 38536 GAAGTTCACGAACTCCTTGGCCAGCACCTCGGGCTTCTTCTTGCCCATGGCGCGACGGAG 38595 |||| || || || |||| ||| || || | ||||||||||||| ||||| || || Sbjct 59269 GAAGATCTCGCGCTGCTTGTCCATTTCCGCGCGGATCTTCTTGCCCATCGCGCGGCGCAG 59210 Query 38596 AAGGTCGGCCTGACCGAGGGTGTACCCGGCCAGGATCTGCGCCGCCTTCTGCACCTGCTC 38655 |||||||| | ||||| | || ||||||| || |||||| || | |||||| || Sbjct 59209 CAGGTCGGCGTCGCCGAGCGAATAGCCGGCCATGACCTGCGCGATCTGCATCACCTGTTC 59150 Query 38656 CTGGTAGATGATGAGCCCGAAGGTCGGGTCCAGGATC 38692 ||| |||||||||| ||||||||| | ||||||| Sbjct 59149 CTGATAGATGATGACGCCGAAGGTCTCCTTCAGGATC 59113 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 140728756469250