Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Picea_20abies_20[ConGenIE_20PRJEB1822-1.0_202015-05-12] 10,253,695 sequences; 12,301,475,675 total letters Query= NC_029046.1 Length=50827 Score E Sequences producing significant alignments: (Bits) Value seq2857 89.7 1e-13 seq1827652 86.0 2e-12 >seq2857 Length=69536 Score = 89.7 bits (98), Expect = 1e-13 Identities = 148/214 (69%), Gaps = 0/214 (0%) Strand=Plus/Plus Query 18116 CGGCAATCGGGTCAATGAGATCGCCGAGATCACCTCCGGCTTGAAGTCGCTCGCCAGAGA 18175 || ||| || || | || ||| ||||||||||| ||||| | ||| |||| |||| || Sbjct 9210 CGACAACCGCGTGCAGGAAATCACCGAGATCACCACCGGCCTCAAGGCGCTGGCCAAGGA 9269 Query 18176 GCTCGATATCGCCGTCGTTTTGCTGTCGCAGCTTAATCGAGCAGTCGAGAGCAGAGAGGA 18235 | | || || || || |||||||||| | || ||||| | | | || || Sbjct 9270 ATTGAACGTCCCCATCATTGCGCTGTCGCAGTTGTCACGTCAGGTCGAAAACCGCGACGA 9329 Query 18236 TAAGCGACCTCTTCTCTCAGACCTTCGCGATTCCGGTGCGATCGAGCAGGACGCCGACAT 18295 || || || | ||| | ||||| || || || || |||||||||||||||||||| | Sbjct 9330 CAAACGCCCGCAGCTCGCGGACCTGCGTGAATCGGGATCGATCGAGCAGGACGCCGACGT 9389 Query 18296 GATCGCGTTCTTGTTCCGTGAGGCCTACTACCTC 18329 | | |||| ||| || |||| ||||| ||| Sbjct 9390 GGTGCTGTTCGTGTATCGCGAGGAATACTATCTC 9423 >seq1827652 Length=1103 Score = 86.0 bits (94), Expect = 2e-12 Identities = 64/75 (85%), Gaps = 0/75 (0%) Strand=Plus/Plus Query 21150 CGGAGTAGAGCAGCCCGGTAGCTCGCGTGGCTCATAACCACGAGGTCGCAGGTTCGAATC 21209 ||| || |||||||||||||||||| ||||||||||| ||||| ||||||| |||| Sbjct 878 CGGGGTGGAGCAGCCCGGTAGCTCGTCAGGCTCATAACCTGAAGGTCACAGGTTCAAATC 937 Query 21210 CTGTCTCCGCAACCA 21224 ||||| ||||||||| Sbjct 938 CTGTCCCCGCAACCA 952 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 142735353216510