Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Picea_20abies_20[ConGenIE_20PRJEB1822-1.0_202015-05-12] 10,253,695 sequences; 12,301,475,675 total letters Query= NC_029132.1 Length=140122 Score E Sequences producing significant alignments: (Bits) Value seq94137 104 2e-17 >seq94137 Length=18398 Score = 104 bits (114), Expect = 2e-17 Identities = 173/250 (69%), Gaps = 0/250 (0%) Strand=Plus/Plus Query 6548 TCGATGTGGTTCAGGTAGATATGCGCATCCCCCAACGTATGCACCAGCTCCCCAGGAACC 6607 |||| || |||||||| | ||||| ||| || |||| |||||| | || || || | Sbjct 8419 TCGAGATGATTCAGGTACAGATGCGTATCGCCGAACGAATGCACGAAGTCTCCGGGCTTC 8478 Query 6608 AACCCCACGACATGAGCGATCATGTACGTGAGCAGAGCGTAACTAGCAATGTTGAACGGC 6667 | || || || || | ||| ||||||||| ||||| || || ||||||||| Sbjct 8479 AGTCCGGTCACCTGCGCCACCATCATCGTGAGCAGGGCGTAGGACGCGATATTGAACGGC 8538 Query 6668 ACCCCTAACCCCATGTCTCCCGATCGTTGATAGAGCTGGCAGGACAGCTCCCCATTCGCG 6727 || || | || || | || || || ||||||||||| || |||| || |||||| Sbjct 8539 ACGCCGAGGAACACATCGGCTGAGCGCTGGTAGAGCTGGCACGAGAGCTTGCCGTTCGCG 8598 Query 6728 ACGTAGAATTGGCAGAGGGTGTGGCACGGGGGGAGCGCCATCAGAGGGAGATCCTTCGGG 6787 || ||||| ||| | ||| |||||| || || | ||||||| || || ||| Sbjct 8599 ACATAGAACTGGAACAGGCAGTGGCATGGCGGCAACGCCATCTTGTCGACTTCGGCCGGA 8658 Query 6788 TTCCACGCGC 6797 |||||||||| Sbjct 8659 TTCCACGCGC 8668 Score = 104 bits (114), Expect = 2e-17 Identities = 173/250 (69%), Gaps = 0/250 (0%) Strand=Plus/Minus Query 34548 GCGCGTGGAACCCGAAGGATCTCCCTCTGATGGCGCTCCCCCCGTGCCACACCCTCTGCC 34607 |||||||||| ||| || || ||||||| | || || |||||| ||| | || Sbjct 8668 GCGCGTGGAATCCGGCCGAAGTCGACAAGATGGCGTTGCCGCCATGCCACTGCCTGTTCC 8609 Query 34608 AATTCTACGTCGCGAATGGGGAGCTGTCCTGCCAGCTCTATCAACGATCGGGAGACATGG 34667 | ||||| |||||||| || |||| || ||||||||||| || || || | || || Sbjct 8608 AGTTCTATGTCGCGAACGGCAAGCTCTCGTGCCAGCTCTACCAGCGCTCAGCCGATGTGT 8549 Query 34668 GGTTAGGGGTGCCGTTCAACATTGCTAGTTACGCTCTGCTCACGTACATGATCGCTCATG 34727 | || ||||||||||| || || ||||| ||||||||| ||| | || || | Sbjct 8548 TCCTCGGCGTGCCGTTCAATATCGCGTCCTACGCCCTGCTCACGATGATGGTGGCGCAGG 8489 Query 34728 TCGTGGGGTTGGTTCCTGGGGAGCTGGTGCATACGTTGGGGGATGCGCATATCTACCTGA 34787 | || || || || || | |||||| |||| || ||| ||||| | ||||||| Sbjct 8488 TGACCGGACTGAAGCCCGGAGACTTCGTGCATTCGTTCGGCGATACGCATCTGTACCTGA 8429 Query 34788 ACCACATCGA 34797 | || |||| Sbjct 8428 ATCATCTCGA 8419 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 392247234089285