Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Picea_20abies_20[ConGenIE_20PRJEB1822-1.0_202015-05-12] 10,253,695 sequences; 12,301,475,675 total letters Query= NC_029996.1 Length=134272 Score E Sequences producing significant alignments: (Bits) Value seq109075 95.1 9e-15 seq59979 95.1 9e-15 seq4768717 91.5 1e-13 seq3250489 91.5 1e-13 seq1015561 91.5 1e-13 seq519039 91.5 1e-13 seq4575705 89.7 4e-13 seq67916 89.7 4e-13 seq407441 84.2 2e-11 seq62192 84.2 2e-11 seq11925 84.2 2e-11 seq4184117 82.4 6e-11 seq497574 82.4 6e-11 seq20237 82.4 6e-11 >seq109075 Length=16623 Score = 95.1 bits (104), Expect = 9e-15 Identities = 85/107 (79%), Gaps = 0/107 (0%) Strand=Plus/Minus Query 39094 TCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAAT 39153 || ||||| ||||| ||||| ||||||||||| |||| |||||||| || || ||||| Sbjct 11066 TCCTTTTGAATATTGTAATCAGCAAGTGTTCGCCCGTCTTCAAGCTGCTTTCCAGCAAAG 11007 Query 39154 ATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTT 39200 || |||||||||||||| | ||| | || || |||||| ||| || Sbjct 11006 ATCAGACGCTGCTGGTCAGGGGGGATGCCTTCCTTGTCCTGGATCTT 10960 Score = 89.7 bits (98), Expect = 4e-13 Identities = 108/147 (73%), Gaps = 0/147 (0%) Strand=Plus/Minus Query 39054 CAAGCCTCCTCTTAAGCGTAACACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATC 39113 || ||| ||||| | || | ||| | || || ||| || ||||| ||||| ||||| Sbjct 10650 CATGCCACCTCTCAGACGGAGCACAAGGTGGAGAGTGGATTCCTTTTGGATATTGTAATC 10591 Query 39114 GGCAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGT 39173 |||||| ||||| | || |||||||| || || ||||| || | ||||||||| || | Sbjct 10590 GGCAAGGGTTCGGCCATCTTCAAGCTGCTTTCCGGCAAAGATCAAACGCTGCTGATCCGG 10531 Query 39174 GGGCACGCTCTCTTTGTCCATGATTTT 39200 ||| | || ||| |||||| ||| || Sbjct 10530 GGGGATGCCCTCCTTGTCCTGGATCTT 10504 Score = 89.7 bits (98), Expect = 4e-13 Identities = 103/139 (74%), Gaps = 0/139 (0%) Strand=Plus/Minus Query 39054 CAAGCCTCCTCTTAAGCGTAACACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATC 39113 || ||| ||||| | || | ||| | || || ||| || ||||| ||||| ||||| Sbjct 10878 CATGCCACCTCTCAGACGGAGCACAAGGTGAAGGGTGGATTCCTTTTGGATATTGTAATC 10819 Query 39114 GGCAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGT 39173 |||||| ||||| | || || ||||| || || ||||| ||||||||||||||||| | Sbjct 10818 GGCAAGGGTTCGACCATCTTCGAGCTGCTTTCCAGCAAAGATAAGACGCTGCTGGTCAGG 10759 Query 39174 GGGCACGCTCTCTTTGTCC 39192 ||| | | || |||||| Sbjct 10758 GGGAATACCTTCCTTGTCC 10740 >seq59979 Length=24830 Score = 95.1 bits (104), Expect = 9e-15 Identities = 150/215 (70%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 39070 CGTAACACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCG 39129 |||| || | |||||| ||| ||| || || |||||||| || ||||| ||||| | Sbjct 7670 CGTAGAACGAGATGTAGAGTGGACTCCTTCTGGATATTATAGTCAGCAAGAGTTCGGCCA 7729 Query 39130 TCATCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTG 39189 || |||||||| || || ||||| || |||||||||||||| | || | || || ||| Sbjct 7730 TCTTCAAGCTGCTTTCCAGCAAAAATTAGACGCTGCTGGTCAGGAGGAATGCCTTCCTTG 7789 Query 39190 TCCATGATTTTCTGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACGTCCACCGTGATA 39249 ||| ||| || |||| | | | || ||| ||| || |||| || || Sbjct 7790 TCCTGGATCTTGGCCTTGACATTGTCGATAGTGTCGGAGCTCTCAACTTCCAAAGTAATC 7849 Query 39250 CTTTTTCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284 | || || || || ||||| |||||||| ||||| Sbjct 7850 GTCTTACCGGTGAGGGTTTTGACAAAGATCTGCAT 7884 Score = 86.0 bits (94), Expect = 5e-12 Identities = 162/237 (68%), Gaps = 6/237 (3%) Strand=Plus/Plus Query 39054 CAAGCCTCCTCTTAAGCGTAACACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATC 39113 || ||| ||||| || || | || | || || ||| || ||||| ||||| ||||| Sbjct 8631 CATGCCACCTCTCAAACGGAGGACAAGGTGCAGGGTGGATTCCTTTTGGATATTGTAATC 8690 Query 39114 GGCAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGT 39173 |||||| ||||| | || || || || || || ||||| || ||||| |||||||| | Sbjct 8691 GGCAAGGGTTCGGCCATCTTCGAGTTGCTTTCCAGCAAAGATCAGACGTTGCTGGTCAGG 8750 Query 39174 GGGCACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGTCGCCACCGTATC---GCTCGA 39230 ||| | || || |||||| ||| || || | | | | ||||| ||| Sbjct 8751 GGGGATGCCTTCCTTGTCCTGGATCTTTGCCTTTACATTGTCAATGGTATCAGAGCT--- 8807 Query 39231 CTCCACGTCCACCGTGATACTTTTTCCCGTCAGCGTTTTAACAAAGATTTGCATCTT 39287 ||| || || | ||||| | || || || || || || |||||||| |||||||| Sbjct 8808 CTCGACCTCGAGAGTGATTGTCTTGCCGGTGAGGGTCTTCACAAAGATCTGCATCTT 8864 >seq4768717 Length=337 Score = 91.5 bits (100), Expect = 1e-13 Identities = 159/230 (69%), Gaps = 6/230 (3%) Strand=Plus/Minus Query 39058 CCTCCTCTTAAGCGTAACACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCA 39117 |||||||| | || | || | || || ||| || || || ||||| ||||||||| Sbjct 250 CCTCCTCTGAGACGGAGAACAAGGTGAAGAGTGGATTCCTTCTGGATATTGTAATCGGCA 191 Query 39118 AGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGC 39177 || || ||| |||| ||||||||||| || |||||||| || | ||||||||||| || Sbjct 190 AGAGTGCGTCCGTCTTCAAGCTGTTTTCCGGCAAATATCAGCCTCTGCTGGTCGGGTGGA 131 Query 39178 ACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGTCGCCACCGTATC---GCTCGACTCC 39234 | | || ||||| ||||| |||| | | | || || ||| ||| Sbjct 130 ATCCCTTCCTTGTCTTGAATTTTAGCCTTGACATTGTCAATTGTGTCAGAGCT---CTCG 74 Query 39235 ACGTCCACCGTGATACTTTTTCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284 || |||| ||||| | || || || || ||||| |||||||| ||||| Sbjct 73 ACTTCCAGAGTGATGGTCTTGCCAGTGAGGGTTTTGACAAAGATCTGCAT 24 >seq3250489 Length=488 Score = 91.5 bits (100), Expect = 1e-13 Identities = 149/215 (69%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 39070 CGTAACACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCG 39129 |||| || | |||||| ||| ||| || || |||||||| || ||||| ||||| | Sbjct 106 CGTAGAACGAGATGTAGAGTGGACTCCTTCTGGATATTATAGTCAGCAAGAGTTCGGCCA 165 Query 39130 TCATCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTG 39189 || |||||||| || || ||||| || |||||||||||||| | || | || || ||| Sbjct 166 TCTTCAAGCTGCTTTCCAGCAAAAATTAGACGCTGCTGGTCAGGAGGAATGCCTTCCTTG 225 Query 39190 TCCATGATTTTCTGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACGTCCACCGTGATA 39249 ||| ||| || || | | | | || ||| ||| || |||| || || Sbjct 226 TCCTGGATCTTGGCCTTCACATTGTCGATAGTGTCGGAGCTCTCAACTTCCAAAGTAATG 285 Query 39250 CTTTTTCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284 | || || || || ||||| |||||||| ||||| Sbjct 286 GTCTTACCGGTGAGGGTTTTCACAAAGATCTGCAT 320 >seq1015561 Length=2156 Score = 91.5 bits (100), Expect = 1e-13 Identities = 163/237 (69%), Gaps = 6/237 (3%) Strand=Plus/Minus Query 39054 CAAGCCTCCTCTTAAGCGTAACACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATC 39113 || ||| ||||| || || | || | || || ||| || ||||| ||||| ||||| Sbjct 1965 CATGCCACCTCTCAAACGAAGGACAAGGTGCAGGGTGGATTCCTTTTGGATATTGTAATC 1906 Query 39114 GGCAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGT 39173 |||||| ||||| | || || ||||| || || ||||| || ||||| ||||| || | Sbjct 1905 GGCAAGGGTTCGGCCATCTTCGAGCTGCTTTCCAGCAAAGATCAGACGTTGCTGATCAGG 1846 Query 39174 GGGCACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGTCGCCACCGTATC---GCTCGA 39230 ||| | || || |||||| ||| ||| || | | | | || || ||| Sbjct 1845 GGGGATGCCTTCCTTGTCCTGGATCTTCGCCTTTACATTGTCAATGGTGTCAGAGCT--- 1789 Query 39231 CTCCACGTCCACCGTGATACTTTTTCCCGTCAGCGTTTTAACAAAGATTTGCATCTT 39287 ||| || || | ||||| | || || || || ||||| |||||||| |||||||| Sbjct 1788 CTCGACCTCGAGAGTGATTGTCTTGCCAGTGAGGGTTTTGACAAAGATCTGCATCTT 1732 >seq519039 Length=4174 Score = 91.5 bits (100), Expect = 1e-13 Identities = 163/237 (69%), Gaps = 6/237 (3%) Strand=Plus/Minus Query 39054 CAAGCCTCCTCTTAAGCGTAACACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATC 39113 || ||| ||||| || || | || | || || ||| || ||||| ||||| ||||| Sbjct 3902 CATGCCACCTCTCAAACGGAGGACAAGGTGCAGGGTGGATTCCTTTTGGATATTGTAATC 3843 Query 39114 GGCAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGT 39173 |||||| ||||| | || || |||||||| || ||||| || ||||| |||||||| | Sbjct 3842 GGCAAGGGTTCGGCCATCTTCGAGCTGTTTTCCAGCAAAGATCAGACGTTGCTGGTCAGG 3783 Query 39174 GGGCACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGTCGCCACCGTATC---GCTCGA 39230 ||| | || || |||||| ||| || || | | | | || || ||| Sbjct 3782 GGGGATGCCTTCCTTGTCCTGGATCTTTGCCTTTACATTATCAATGGTGTCAGAGCT--- 3726 Query 39231 CTCCACGTCCACCGTGATACTTTTTCCCGTCAGCGTTTTAACAAAGATTTGCATCTT 39287 ||| || || | ||||| | || || || || || || |||||||| |||||||| Sbjct 3725 CTCGACCTCGAGAGTGATCGTCTTGCCAGTGAGGGTCTTCACAAAGATCTGCATCTT 3669 >seq4575705 Length=350 Score = 89.7 bits (98), Expect = 4e-13 Identities = 129/182 (71%), Gaps = 0/182 (0%) Strand=Plus/Plus Query 39103 ATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAATATAAGACGC 39162 |||||||| || ||||| ||||| | || ||||||||||| || |||||||| |||||| Sbjct 1 ATATTATAGTCAGCAAGGGTTCGGCCATCTTCAAGCTGTTTTCCAGCAAATATTAGACGC 60 Query 39163 TGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGTCGCCACCGTA 39222 |||||||| | || | || || |||||| ||| || || | | | | ||| Sbjct 61 TGCTGGTCAGGAGGAATGCCTTCCTTGTCCTGGATCTTGGCCTTCACATTGTCGATGGTA 120 Query 39223 TCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGTCAGCGTTTTAACAAAGATTTGC 39282 ||| ||| || |||| || || | || || || || ||||||||||| || ||| Sbjct 121 TCGGAGCTCTCAACTTCCAAGGTAATCGTCTTACCGGTGAGGGTTTTAACAAAAATCTGC 180 Query 39283 AT 39284 || Sbjct 181 AT 182 >seq67916 Length=22924 Score = 89.7 bits (98), Expect = 4e-13 Identities = 102/136 (75%), Gaps = 1/136 (1%) Strand=Plus/Plus Query 39066 TAAG-CGTAACACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTC 39124 |||| |||| || | ||| || ||| ||| || || |||||||| || |||||||||| Sbjct 19135 TAAGACGTAGAACGAGATGCAGAGTGGACTCCTTCTGGATATTATAGTCAGCAAGTGTTC 19194 Query 39125 GTTCGTCATCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCT 39184 | | || |||||||| || || ||||| || |||||||||||||| | || | || | Sbjct 19195 GGCCATCTTCAAGCTGCTTTCCAGCAAAAATTAGACGCTGCTGGTCAGGAGGAATGCCTT 19254 Query 39185 CTTTGTCCATGATTTT 39200 | |||||| ||| || Sbjct 19255 CCTTGTCCTGGATCTT 19270 >seq407441 Length=5406 Score = 84.2 bits (92), Expect = 2e-11 Identities = 100/136 (74%), Gaps = 0/136 (0%) Strand=Plus/Minus Query 39057 GCCTCCTCTTAAGCGTAACACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGC 39116 |||||| ||||| || || ||||| || || || || || || ||||||||||| || Sbjct 2655 GCCTCCCCTTAACCGCAAAACCAAGTGAAGAGTTGATTCCTTCTGAATATTATAATCTGC 2596 Query 39117 AAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGG 39176 || ||||| | || || |||||||| || |||||||| | |||||||| || | || Sbjct 2595 TAGAGTTCGCCCATCTTCTAGCTGTTTTCCAGCAAATATTAAGCGCTGCTGATCTGGAGG 2536 Query 39177 CACGCTCTCTTTGTCC 39192 | | ||| |||||| Sbjct 2535 AATACCCTCCTTGTCC 2520 >seq62192 Length=24286 Score = 84.2 bits (92), Expect = 2e-11 Identities = 133/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 39094 TCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAAT 39153 || || || ||||| ||||||||||| || ||| |||| || |||||||| || ||||| Sbjct 19912 TCCTTCTGGATATTGTAATCGGCAAGAGTGCGTCCGTCCTCGAGCTGTTTTCCTGCAAAG 19971 Query 39154 ATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGTC 39213 || | | ||||||||||| ||| | | ||| ||||| ||||| || | | Sbjct 19972 ATCAACCTCTGCTGGTCGGGGGGAATTCCCTCCTTGTCTTGAATTTTGGCCTTCACATTG 20031 Query 39214 GCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGTCAGCGTTTTAACA 39273 | | |||||| ||| || || | ||||| | || || || || |||||||| Sbjct 20032 TCAATAGTATCGGAATTCTCAACTTCGAGAGTGATGGTCTTGCCAGTTAGGGTTTTAACG 20091 Query 39274 AAGATTTGCAT 39284 ||||| ||||| Sbjct 20092 AAGATCTGCAT 20102 >seq11925 Length=47080 Score = 84.2 bits (92), Expect = 2e-11 Identities = 100/136 (74%), Gaps = 0/136 (0%) Strand=Plus/Plus Query 39057 GCCTCCTCTTAAGCGTAACACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGC 39116 |||||| ||||| || || ||||| || || || || || || ||||||||||| || Sbjct 3999 GCCTCCCCTTAACCGCAAAACCAAGTGAAGAGTTGATTCCTTCTGAATATTATAATCTGC 4058 Query 39117 AAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGG 39176 || ||||| | || || |||||||| || |||||||| | |||||||| || | || Sbjct 4059 TAGAGTTCGCCCATCTTCTAGCTGTTTTCCAGCAAATATTAAGCGCTGCTGATCTGGAGG 4118 Query 39177 CACGCTCTCTTTGTCC 39192 | | ||| |||||| Sbjct 4119 AATACCCTCCTTGTCC 4134 >seq4184117 Length=380 Score = 82.4 bits (90), Expect = 6e-11 Identities = 77/98 (79%), Gaps = 0/98 (0%) Strand=Plus/Plus Query 39094 TCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAAT 39153 ||||| || ||||| ||||| ||||| ||||| | || || |||||||| || ||||| Sbjct 283 TCTTTCTGGATATTGTAATCAGCAAGGGTTCGGCCATCTTCGAGCTGTTTTCCAGCAAAG 342 Query 39154 ATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTC 39191 || |||||||||||||| | ||| | || || ||||| Sbjct 343 ATCAGACGCTGCTGGTCAGGGGGGATGCCTTCCTTGTC 380 >seq497574 Length=4355 Score = 82.4 bits (90), Expect = 6e-11 Identities = 136/195 (70%), Gaps = 6/195 (3%) Strand=Plus/Minus Query 39093 CTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAA 39152 ||| || ||||| || ||||||||||| ||||| |||| |||||||| || || ||||| Sbjct 2079 CTCCTTCTGTATGTTGTAATCGGCAAGAGTTCGCCCGTCCTCAAGCTGCTTTCCAGCAAA 2020 Query 39153 TATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGT 39212 || | | ||||||||||| || | | ||| ||||| ||||| || | | Sbjct 2019 GATTAACCTCTGCTGGTCGGGTGGAATCCCCTCCTTGTCTTGAATTTTGGCCTTCACATT 1960 Query 39213 CGCCACCGTATC---GCTCGACTCCACGTCCACCGTGATACTTTTTCCCGTCAGCGTTTT 39269 | | ||| || ||| ||| || |||| || || | || || ||||| ||||| Sbjct 1959 GTCGATCGTGTCAGAGCT---CTCAACTTCCAGAGTAATGGTCTTGCCGGTCAGGGTTTT 1903 Query 39270 AACAAAGATTTGCAT 39284 |||||||| ||||| Sbjct 1902 GACAAAGATCTGCAT 1888 >seq20237 Length=39773 Score = 82.4 bits (90), Expect = 6e-11 Identities = 137/197 (70%), Gaps = 6/197 (3%) Strand=Plus/Minus Query 39094 TCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAAT 39153 || |||||||| || || || || || || || |||| |||||||| || || || || Sbjct 30230 TCCTTTTGTATGTTGTAGTCAGCCAGGGTACGGCCGTCCTCAAGCTGCTTTCCTGCGAAG 30171 Query 39154 ATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGTC 39213 || |||||||||||||||| ||| | | || |||||| ||| || ||||| | Sbjct 30170 ATCAGACGCTGCTGGTCGGGGGGAATCCCTTCCTTGTCCTGGATCTTAGCTTTGACATTG 30111 Query 39214 GCCACCGTATC---GCTCGACTCCACGTCCACCGTGATACTTTTTCCCGTCAGCGTTTTA 39270 | | || || ||| ||| || || | ||||| | || || || || || || Sbjct 30110 TCAATGGTGTCAGAGCT---CTCGACCTCGAGAGTGATGGTCTTGCCGGTGAGGGTCTTG 30054 Query 39271 ACAAAGATTTGCATCTT 39287 |||||||| |||||||| Sbjct 30053 ACAAAGATCTGCATCTT 30037 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 375866614603535