Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Picea_20abies_20[ConGenIE_20PRJEB1822-1.0_202015-05-12] 10,253,695 sequences; 12,301,475,675 total letters Query= NC_030240.1 Length=128058 Score E Sequences producing significant alignments: (Bits) Value seq812081 84.2 2e-11 seq17269 84.2 2e-11 >seq812081 Length=2641 Score = 84.2 bits (92), Expect = 2e-11 Identities = 86/111 (77%), Gaps = 1/111 (1%) Strand=Plus/Plus Query 101035 GTGCAAAGTTGATTCTTTTTGAATATTGTAATCGGCCATAGTTTTGGAATCTTCCAATTG 101094 |||||| || ||||| ||||| |||||||||||||| | |||| | |||||| | ||| Sbjct 21 GTGCAAGGTGGATTCCTTTTGGATATTGTAATCGGCAAGGGTTTGGCCATCTTCGAGTTG 80 Query 101095 TTTGCCCGCATATATAAGCCTTTGTTGGTCTACGGGCACGCCTTCTTTGTC 101145 || || ||| | || || | ||||||||| | ||| ||||||| ||||| Sbjct 81 CTTTCCAGCAAAGATCAGACGTTGTTGGTC-AGGGGGACGCCTTTCTTGTC 130 >seq17269 Length=41791 Score = 84.2 bits (92), Expect = 2e-11 Identities = 148/216 (69%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 101030 ACCATGTGCAAAGTTGATTCTTTTTGAATATTGTAATCGGCCATAGTTTTGGAATCTTCC 101089 |||| ||| | ||||| ||||||| |||||||||||| |||| |||| | ||| ||| Sbjct 17113 ACCAGGTGTAGGGTTGACTCTTTTTTAATATTGTAATCAGCCAGAGTTCTCCCATCCTCC 17172 Query 101090 AATTGTTTGCCCGCATATATAAGCCTTTGTTGGTCTACGGGCACGCCTTCTTTGTCGGCA 101149 || || || || ||| | || | | ||||||||| | || | || || || || | Sbjct 17173 AACTGCTTTCCAGCAAAAATCAATCGTTGTTGGTCAAGAGGAATACCCTCCTTATCTTGA 17232 Query 101150 ATTTTTTGTTTCACATCGGCCACCGTCTCTGTGGACGTTGTTTCGACGGTAATAGTTTTG 101209 | || ||||||| | | || |||| ||| | |||| ||||||||| || Sbjct 17233 CTCTTAGTCTTCACATTATCGATTGTGTCTGATGACTCTACCTCGAGGGTAATAGTCTTA 17292 Query 101210 CCCGTCAATGTTTTAATAAAAATTTGCATTATTACA 101245 | |||| | |||||| || || |||||| || || Sbjct 17293 CTAGTCAGTTTTTTAACGAAGATCTGCATTGTTGCA 17328 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 358466756572005