Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Picea_20abies_20[ConGenIE_20PRJEB1822-1.0_202015-05-12] 10,253,695 sequences; 12,301,475,675 total letters Query= NC_031074.1 Length=92580 Score E Sequences producing significant alignments: (Bits) Value seq94137 188 4e-43 >seq94137 Length=18398 Score = 188 bits (208), Expect = 4e-43 Identities = 360/531 (68%), Gaps = 6/531 (1%) Strand=Plus/Minus Query 836 GATCGCACCGGCACCGGCACGCTGAGCAAGTTCGGCGCCCAGCTGCGGTACGACCTCACC 895 || |||||||||||||| || ||| | |||||| ||| |||||| | | || | Sbjct 9002 GACCGCACCGGCACCGGGACACTGTCGATCTTCGGCCATCAGATGCGGTTCAATCTGGCA 8943 Query 896 GAGGGCTTCCCGCTGGTCACCACGAAGCGCGTCCACTTCAAATCGGTTGCGTACGAACTT 955 ||| ||||||||| | || || ||| | || | || ||| | | ||||||| Sbjct 8942 TCGGGTTTCCCGCTGCTGACAACCAAGAAGCTTCATCTGAAGTCGATCGTCCACGAACTG 8883 Query 956 CTGTGGTTCCTCAGTGGCGACACGAACGTGAAGGCGCTCAACGACAACGGCGTCACCATC 1015 |||||||| || || ||||| ||| | || || |||||||||||||| ||| Sbjct 8882 CTGTGGTTTCTGGCGGGTGACACCAACATCAAATACCTGAACGACAACGGCGTTCGCATT 8823 Query 1016 TGGGACGAGTGGGCCGACGCCGGCGGAAACCTCGGTCCTGTCTACGGCGCGCAGTGGCGG 1075 |||||||||||||| |||| ||| || ||||| || ||||| ||| ||||||||||| Sbjct 8822 TGGGACGAGTGGGCTGACGAGAACGGCAATCTCGGCCCGGTCTATGGCTCGCAGTGGCGG 8763 Query 1076 CACTGGCATGTCGAGGACGGAGGATCGTCGTGGATTGACCAGATCTCGGCCGCCGTGGAG 1135 |||| | ||| || || | ||| |||||||| || | | ||| Sbjct 8762 TCATGGCCCGCGCCGGATGGCGGCAC------GATCGACCAGATTTCCAATGTGATCGAG 8709 Query 1136 CTGCTTCGCGAGGACCCTGACTCGCGCCGGAACGTGGTATCCGCATGGAACGTCGGTGAC 1195 || | || | | || ||||||||| || | || ||| ||||| | || Sbjct 8708 ATGATCCGGAAAAATCCGGACTCGCGCAGGCTGATCGTCAGCGCGTGGAATCCGGCCGAA 8649 Query 1196 CTCAGCGACATGGCACTTCACCCGTGCCACATCATGTTCCAGCTGTACGTCGTCGACGGC 1255 || | | ||||| | | || |||||| | |||||||| | || |||| ||||| Sbjct 8648 GTCGACAAGATGGCGTTGCCGCCATGCCACTGCCTGTTCCAGTTCTATGTCGCGAACGGC 8589 Query 1256 CGGCTCTCGCTGCAGGTCTACCAGCGCAGCGCGGACATGTTCCTCGGTGTGCCGTTCAAT 1315 ||||||| ||| ||||||||||| || || |||||||||| |||||||||||| Sbjct 8588 AAGCTCTCGTGCCAGCTCTACCAGCGCTCAGCCGATGTGTTCCTCGGCGTGCCGTTCAAT 8529 Query 1316 ATCGCCTCGTACGCGCTCCTCGCGCACATGTTCGCGCAGCAGGCCGGCCTG 1366 ||||| || ||||| || ||| || ||| | |||||| | |||| ||| Sbjct 8528 ATCGCGTCCTACGCCCTGCTCACGATGATGGTGGCGCAGGTGACCGGACTG 8478 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 259124599629195