Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Picea_20abies_20[ConGenIE_20PRJEB1822-1.0_202015-05-12] 10,253,695 sequences; 12,301,475,675 total letters Query= NC_031078.1 Length=50082 Score E Sequences producing significant alignments: (Bits) Value seq3094 134 4e-27 >seq3094 Length=68251 Score = 134 bits (148), Expect = 4e-27 Identities = 203/287 (71%), Gaps = 4/287 (1%) Strand=Plus/Minus Query 40083 CCGAAGGTCCCGATCTGTGCGACCTTGTCCGCCCCGTACTTCTCGGTGACGTACCTGATC 40142 |||||||| |||||| | |||| || ||||| ||| || || | |||| Sbjct 58419 CCGAAGGTGATGATCTGGCCCACCTGCTCGCGGCCGTAGCGCTCTTGCACATAGCGGATC 58360 Query 40143 ACGTCGCCCCGTCG--CCGGTCATCGAAGTCGATGTCAACGTCGGGCATGGACACGCGCT 40200 || ||||| || || || | || |||||||||||| | ||| ||||| || ||||| | Sbjct 58359 ACCTCGCCGCGGCGGTCCTGACA--GAAGTCGATGTCGAAGTCCGGCATCGAGACGCGTT 58302 Query 40201 CGGGGTTCAGGAACCGCTCGAAGATGAGCCCGTGCGGGATGGGGTCCAGGTCTGTGATGC 40260 ||||||| || || |||||||| | || ||| | |||| || || || || |||||| Sbjct 58301 CGGGGTTGAGAAAGCGCTCGAACAGCAGACCGAACCGGATCGGATCGAGATCGGTGATGG 58242 Query 40261 CGAGGCAGTAGGCGACCAGCGAACCGGCAGCCGAGCCACGTCCGGGTCCGACCCACACGC 40320 || |||||| |||||||| || || |||| || || || ||||| ||| | || Sbjct 58241 TCAGCGCGTAGGCAACCAGCGAGCCTGCGCCCGAACCGCGGCCCGGTCCCACCGGAATGC 58182 Query 40321 CGTTCTCCTTGGCCCAGCCGATGAAGTCGGCGACGACCAGGAAGTAG 40367 | | | ||| ||||| ||||||||| | |||| |||||||||| Sbjct 58181 CATGCGACTTCGCCCACTTGATGAAGTCCGACACGATCAGGAAGTAG 58135 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 140641635321960